| Definition | Vibrio cholerae O395 chromosome 2, complete sequence. |
|---|---|
| Accession | NC_009457 |
| Length | 3,024,069 |
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The map label for this gene is tagE-1 [C]
Identifier: 147673859
GI number: 147673859
Start: 395388
End: 396296
Strand: Direct
Name: tagE-1 [C]
Synonym: VC0395_A0367
Alternate gene names: 147673859
Gene position: 395388-396296 (Clockwise)
Preceding gene: 147673127
Following gene: 147675418
Centisome position: 13.07
GC content: 34.76
Gene sequence:
>909_bases ATGAATAAGACACTTAGGATTACATTATTATCTATATCTGGTTCAAAAACATTTAACATAAAATTCAGACATAGAGTGTT TTTACATTTGACTTTTTGTTTTATTATGTTGTTTTTTTTGGCAATAGCTATGTTGATTTTTAATTTTGACATGAAATTGA GTTCCTCTCTTCTAAGTCAGATAAAAAATGAATATAAGACCTTTTTCTTAGAGAACAAAATATCATCAATTAACAGTTCT TCATCTGAACTAATGGAAGATTTGTTTTCAAAGCAAGAGCGTTACGAGTTAGCTATCAATCGTTTAGAAAGATTAGAATC TTTTGTACATAGCGCTGAATCGATCGATATGGTGACTGTTACAGAGCAACTTGGTAGCTATATGAAAGAAACTGTGTTGA ATGAGATTCCTAATGGCTTTCCTATTCCTGATGCAAAGATATCATCTCGCTATGGTGAACGTGTGCATCCAGTTACCAAA GTTAAGCAGATTCACCATGGAATTGATTTCCCTGCTGCTATTGGCACACCAATCTATTCACCAGCAGATGGTGTTGTTGA AGCGATAAGAGTCAGTACCCAGGGTTCAGGTAATTTTATGCGTCTTCAGCATACTTATGGATTTAGTAGTAGTTACTCTC ATTTGCATAAGTTCTCGGTTAAAGAGGGGGATTTTGTCAAAAAAGGTGAATTAATTGCGTACTCAGGAAATACTGGGTTA TCCTCTGGGCCACACCTACACTATGAAATCCGTTTCCTCGGTAAATCCCTAGACCCTCACCCATTTATAAAATGGAATTA CGATAATTTTTCTGAAATTACTAATAAAGTACCATTAATCAAATGGGATGAATTGCTGACTAACATTGAGATCCGGATTG CAATGAATCCGAATCTCAATGCACAATAA
Upstream 100 bases:
>100_bases TTTTCTGGATTTTCTTTAACAAAAAAAATCAAGGATGGCATGATAAAATCGCAAAGACCATCGTAATAAAATTGCCATCT AGTACTCAGTAATATTTAAA
Downstream 100 bases:
>100_bases GACTAGAAGTAGTACTTTGAATTTAAACTTATAGAAAGCACATCATTGTACTTATCGAACTGATATCTTAACTCTGTTCC AACGCTAAGCTCTGGAATTA
Product: tagE protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 302; Mature: 302
Protein sequence:
>302_residues MNKTLRITLLSISGSKTFNIKFRHRVFLHLTFCFIMLFFLAIAMLIFNFDMKLSSSLLSQIKNEYKTFFLENKISSINSS SSELMEDLFSKQERYELAINRLERLESFVHSAESIDMVTVTEQLGSYMKETVLNEIPNGFPIPDAKISSRYGERVHPVTK VKQIHHGIDFPAAIGTPIYSPADGVVEAIRVSTQGSGNFMRLQHTYGFSSSYSHLHKFSVKEGDFVKKGELIAYSGNTGL SSGPHLHYEIRFLGKSLDPHPFIKWNYDNFSEITNKVPLIKWDELLTNIEIRIAMNPNLNAQ
Sequences:
>Translated_302_residues MNKTLRITLLSISGSKTFNIKFRHRVFLHLTFCFIMLFFLAIAMLIFNFDMKLSSSLLSQIKNEYKTFFLENKISSINSS SSELMEDLFSKQERYELAINRLERLESFVHSAESIDMVTVTEQLGSYMKETVLNEIPNGFPIPDAKISSRYGERVHPVTK VKQIHHGIDFPAAIGTPIYSPADGVVEAIRVSTQGSGNFMRLQHTYGFSSSYSHLHKFSVKEGDFVKKGELIAYSGNTGL SSGPHLHYEIRFLGKSLDPHPFIKWNYDNFSEITNKVPLIKWDELLTNIEIRIAMNPNLNAQ >Mature_302_residues MNKTLRITLLSISGSKTFNIKFRHRVFLHLTFCFIMLFFLAIAMLIFNFDMKLSSSLLSQIKNEYKTFFLENKISSINSS SSELMEDLFSKQERYELAINRLERLESFVHSAESIDMVTVTEQLGSYMKETVLNEIPNGFPIPDAKISSRYGERVHPVTK VKQIHHGIDFPAAIGTPIYSPADGVVEAIRVSTQGSGNFMRLQHTYGFSSSYSHLHKFSVKEGDFVKKGELIAYSGNTGL SSGPHLHYEIRFLGKSLDPHPFIKWNYDNFSEITNKVPLIKWDELLTNIEIRIAMNPNLNAQ
Specific function: Could Be Involved In Cell Wall Degradation Or Formation. [C]
COG id: COG0739
COG function: function code M; Membrane proteins related to metalloendopeptidases
Gene ontology:
Cell location: Cell membrane; Single-pass membrane protein (Potential) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the peptidase M23B family [H]
Homologues:
Organism=Escherichia coli, GI87081989, Length=115, Percent_Identity=40.8695652173913, Blast_Score=91, Evalue=1e-19, Organism=Escherichia coli, GI1789099, Length=95, Percent_Identity=38.9473684210526, Blast_Score=63, Evalue=2e-11, Organism=Escherichia coli, GI87082174, Length=108, Percent_Identity=32.4074074074074, Blast_Score=62, Evalue=3e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011055 - InterPro: IPR007340 - InterPro: IPR016047 - InterPro: IPR002886 [H]
Pfam domain/function: PF04225 OapA; PF01551 Peptidase_M23 [H]
EC number: 3.4.24.- [C]
Molecular weight: Translated: 34471; Mature: 34471
Theoretical pI: Translated: 8.84; Mature: 8.84
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNKTLRITLLSISGSKTFNIKFRHRVFLHLTFCFIMLFFLAIAMLIFNFDMKLSSSLLSQ CCCEEEEEEEEECCCEEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHH IKNEYKTFFLENKISSINSSSSELMEDLFSKQERYELAINRLERLESFVHSAESIDMVTV HHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHH TEQLGSYMKETVLNEIPNGFPIPDAKISSRYGERVHPVTKVKQIHHGIDFPAAIGTPIYS HHHHHHHHHHHHHHHCCCCCCCCCCHHHHHCCCCCCHHHHHHHHHCCCCCCHHHCCCCCC PADGVVEAIRVSTQGSGNFMRLQHTYGFSSSYSHLHKFSVKEGDFVKKGELIAYSGNTGL CHHHHHHHHHEECCCCCCEEEEEEECCCCCCHHHHHHHCCCCCCCEECCCEEEEECCCCC SSGPHLHYEIRFLGKSLDPHPFIKWNYDNFSEITNKVPLIKWDELLTNIEIRIAMNPNLN CCCCEEEEEEEEECCCCCCCCCEEECCCCHHHHHCCCCCEEHHHHHCCEEEEEEECCCCC AQ CC >Mature Secondary Structure MNKTLRITLLSISGSKTFNIKFRHRVFLHLTFCFIMLFFLAIAMLIFNFDMKLSSSLLSQ CCCEEEEEEEEECCCEEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHH IKNEYKTFFLENKISSINSSSSELMEDLFSKQERYELAINRLERLESFVHSAESIDMVTV HHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHH TEQLGSYMKETVLNEIPNGFPIPDAKISSRYGERVHPVTKVKQIHHGIDFPAAIGTPIYS HHHHHHHHHHHHHHHCCCCCCCCCCHHHHHCCCCCCHHHHHHHHHCCCCCCHHHCCCCCC PADGVVEAIRVSTQGSGNFMRLQHTYGFSSSYSHLHKFSVKEGDFVKKGELIAYSGNTGL CHHHHHHHHHEECCCCCCEEEEEEECCCCCCHHHHHHHCCCCCCCEECCCEEEEECCCCC SSGPHLHYEIRFLGKSLDPHPFIKWNYDNFSEITNKVPLIKWDELLTNIEIRIAMNPNLN CCCCEEEEEEEEECCCCCCCCCEEECCCCHHHHHCCCCCEEHHHHHCCEEEEEEECCCCC AQ CC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 7542800 [H]