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The map label for this gene is acfC

Identifier: 147673127

GI number: 147673127

Start: 394120

End: 394890

Strand: Direct

Name: acfC

Synonym: VC0395_A0366

Alternate gene names: NA

Gene position: 394120-394890 (Clockwise)

Preceding gene: 147673778

Following gene: 147673859

Centisome position: 13.03

GC content: 36.32

Gene sequence:

>771_bases
ATGTATTTCATGAAAAGTAAGAATCGATTTTTATTAATTTCTTTACTATCATTTTCTACGAGTGTTTTTGCGGATGTTAA
TCTTTATGGACCTGGTGGTCCACATGTGCCATTGATTAAAGTTGCAGAAAGTTTTGAAAAATCACAATCAAAACGCGTTA
ATATTACTTTTGGACCTCAAGCTACTTGGAATGACAAAGCAAAAAAAAATGCTGATATTTTATTCGGTGCATCAGAACAT
TCTGCTCTAGCTATTGCAGAAGGACATAGTGAAAGATTTTCAAAATTTAATATTCATCCTGTATTCATGCGTGAAGCAAT
TATCTTAGTAAAAAAAGGTAATCCGAAAAATATTAAGGGTATGGCTGATCTTTTGAAGCCTGGTATCGGAATCGTCGTAA
ATGATGGAGCAGGTGTAAGTAATACATCGGGCACTGCTGTTTGGGAAGATTCAGTTGGTAGAATGAAAAATGTTGAGAAA
CTCCAGGCATTTAGATCTAATATTCACGTTTTTGCCCCAAATAGTGGATCAGCGCGTAAGGCGTTTGTTGATGGTGAAGA
TATTGATGCATGGATTACATGGGTCGATTGGGCCATAGCTAATCCAACAATCGGCGATATGGTTAGAATGGAGGATGAAT
ATCGTATTTATCGTGACTTCAACGTTGTTCTTGCCAAAAATCCATCTAGTGAAGCGATTGACTTTTTTGATTATCTAACA
AAAAGCAAAGACGCTGAAGCAATCTTTCAGCACTATGGCTGGTTTAAGTGA

Upstream 100 bases:

>100_bases
TATCAAGTTTGGGTAATAAGATTTCTCAACAGGCTTATTCTCAAAAAGCACTGATTGGTCATCAAGATGATTTAATCAGT
AAGTTTATCATTTAATATGG

Downstream 100 bases:

>100_bases
TTTTAGGGAGAGTACATGTACTCTCCTATGAAATTTTTCGTAGGAACTAATATGAATCAAAGAGTTAGTGTTATTTATGC
TACTTTCTGGGATAGACTAT

Product: accessory colonization factor AcfC

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 256; Mature: 256

Protein sequence:

>256_residues
MYFMKSKNRFLLISLLSFSTSVFADVNLYGPGGPHVPLIKVAESFEKSQSKRVNITFGPQATWNDKAKKNADILFGASEH
SALAIAEGHSERFSKFNIHPVFMREAIILVKKGNPKNIKGMADLLKPGIGIVVNDGAGVSNTSGTAVWEDSVGRMKNVEK
LQAFRSNIHVFAPNSGSARKAFVDGEDIDAWITWVDWAIANPTIGDMVRMEDEYRIYRDFNVVLAKNPSSEAIDFFDYLT
KSKDAEAIFQHYGWFK

Sequences:

>Translated_256_residues
MYFMKSKNRFLLISLLSFSTSVFADVNLYGPGGPHVPLIKVAESFEKSQSKRVNITFGPQATWNDKAKKNADILFGASEH
SALAIAEGHSERFSKFNIHPVFMREAIILVKKGNPKNIKGMADLLKPGIGIVVNDGAGVSNTSGTAVWEDSVGRMKNVEK
LQAFRSNIHVFAPNSGSARKAFVDGEDIDAWITWVDWAIANPTIGDMVRMEDEYRIYRDFNVVLAKNPSSEAIDFFDYLT
KSKDAEAIFQHYGWFK
>Mature_256_residues
MYFMKSKNRFLLISLLSFSTSVFADVNLYGPGGPHVPLIKVAESFEKSQSKRVNITFGPQATWNDKAKKNADILFGASEH
SALAIAEGHSERFSKFNIHPVFMREAIILVKKGNPKNIKGMADLLKPGIGIVVNDGAGVSNTSGTAVWEDSVGRMKNVEK
LQAFRSNIHVFAPNSGSARKAFVDGEDIDAWITWVDWAIANPTIGDMVRMEDEYRIYRDFNVVLAKNPSSEAIDFFDYLT
KSKDAEAIFQHYGWFK

Specific function: Unknown

COG id: COG4588

COG function: function code R; Accessory colonization factor AcfC, contains ABC-type periplasmic domain

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 28576; Mature: 28576

Theoretical pI: Translated: 9.21; Mature: 9.21

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MYFMKSKNRFLLISLLSFSTSVFADVNLYGPGGPHVPLIKVAESFEKSQSKRVNITFGPQ
CCEECCCCCEEEEEEECCCCEEEEEEEEECCCCCCCHHHHHHHHHHHCCCCEEEEEECCC
ATWNDKAKKNADILFGASEHSALAIAEGHSERFSKFNIHPVFMREAIILVKKGNPKNIKG
CCCCCCCCCCCEEEEECCCCCEEEEECCCHHHHHCCCCCEEEEEEEEEEEECCCCCCCHH
MADLLKPGIGIVVNDGAGVSNTSGTAVWEDSVGRMKNVEKLQAFRSNIHVFAPNSGSARK
HHHHHCCCCEEEEECCCCCCCCCCCEEECCCHHHHHHHHHHHHHHCCEEEECCCCCCCCE
AFVDGEDIDAWITWVDWAIANPTIGDMVRMEDEYRIYRDFNVVLAKNPSSEAIDFFDYLT
EEECCCCCCEEEEEEEHEECCCCHHHHEEECCCEEEEEEEEEEEECCCCCHHHHHHHHHH
KSKDAEAIFQHYGWFK
CCCCHHHHHHHCCCCC
>Mature Secondary Structure
MYFMKSKNRFLLISLLSFSTSVFADVNLYGPGGPHVPLIKVAESFEKSQSKRVNITFGPQ
CCEECCCCCEEEEEEECCCCEEEEEEEEECCCCCCCHHHHHHHHHHHCCCCEEEEEECCC
ATWNDKAKKNADILFGASEHSALAIAEGHSERFSKFNIHPVFMREAIILVKKGNPKNIKG
CCCCCCCCCCCEEEEECCCCCEEEEECCCHHHHHCCCCCEEEEEEEEEEEECCCCCCCHH
MADLLKPGIGIVVNDGAGVSNTSGTAVWEDSVGRMKNVEKLQAFRSNIHVFAPNSGSARK
HHHHHCCCCEEEEECCCCCCCCCCCEEECCCHHHHHHHHHHHHHHCCEEEECCCCCCCCE
AFVDGEDIDAWITWVDWAIANPTIGDMVRMEDEYRIYRDFNVVLAKNPSSEAIDFFDYLT
EEECCCCCCEEEEEEEHEECCCCHHHHEEECCCEEEEEEEEEEEECCCCCHHHHHHHHHH
KSKDAEAIFQHYGWFK
CCCCHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA