| Definition | Vibrio cholerae O395 chromosome 2, complete sequence. |
|---|---|
| Accession | NC_009457 |
| Length | 3,024,069 |
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The map label for this gene is hisD [H]
Identifier: 147673851
GI number: 147673851
Start: 726782
End: 728077
Strand: Direct
Name: hisD [H]
Synonym: VC0395_A0703
Alternate gene names: 147673851
Gene position: 726782-728077 (Clockwise)
Preceding gene: 147674443
Following gene: 147673356
Centisome position: 24.03
GC content: 51.62
Gene sequence:
>1296_bases ATGAGAACCGTGGTTTGGCAATCGTTGAGTGAAGCTCAGCAAGAATCGATTTTAGAACGTCCTGCGATTACCGAAGGAGC AAACATCACTGCCGCAGTTGCGCAGGTGATTGCGAAAGTGCGCAGTGAGGGTGATGCCGCACTGTTTGAATTAACTGAAA AATTTGATCGTGTAAAACCCGCTTCACTGCGCGTATCTCGCGAAGAGATGGATGCCGCGGCCGCGAGTTTGTCGGAAACA ATGAAACAGGCGTTGGAGCAGGCATACAACAACATCAGCAAATTCCACAAGGCGCAAAAAGCGCAACCAATCAAAGTGGA AACCATGCCCGGAGTGGTGTGTGAGCAAGTCACTCGTCCGATCAACAAAGTGGGTCTGTATATTCCGGGTGGCAGCGCAC CGCTACCATCAACCGTACTAATGCTCGGTGTGCCTGCGCAAATCGCTGGTTGTCGTAAAGTGGTGCTCTGCTCACCTCCG CCAATTGCTGATGAAATTCTCTACGTCGCTAAGCTGTGTAACATCGATGAGGTGTACAACCTAGGCGGCGGTCAGGCAAT CGCCGCAATGGCTTACGGTACGGAAACGGTGACTAAAGTTGACAAAATCTTTGGCCCCGGTAACGCCTATGTGACGGAAG CAAAACGCCAAGTGAGTAACGATTTCCGTGGCGCAGCGATTGATATGCCTGCAGGACCTTCAGAAGTATTGGTGATTGCT GATGAAACGGCGGATGCCAATTTTATCGCCGCCGATCTACTCAGTCAGGCAGAGCACGGCCCAGATTCACAGGTGGTTCT GGTCACACCATCACCAGTGTTGGCCGATCAAGTGACGGACGCAGTGCAAAAGCAGCTTAAAGTGCTTTCGCGCGCCAGCA TTGCTGAAAAAGCCTTGGCTTCCAGTCTGATCATTATTGCTGAATCACTCACCCAAGCAGTGTCGATTTCTAACTACTAC GGCCCTGAGCACTTGATTGTGCAGACGCGCAACCCGCGTGAGTTGGTTCCACTGCTCGATAACGCAGGCTCCATTTTCCT TGGCGATTGGTCGCCAGAATCGGTAGGCGATTACGCTTCTGGTACCAACCATGTGCTACCCACTTACGGTTACACCCGCA CCTATTCCAGCTTAGGTTTGGCCGATTTCAGTAAACGCATGACAGTGCAAGAGCTGACCGCTGATGGCTTGCAATTGCTT GCGCCCACCGTAGTAACGATGGCGGAAGCGGAAGGGTTAGACGCGCACAAACGTGCGGTTACGATTCGAGTAGAAAAATT ACAGAAGGCTCAATAA
Upstream 100 bases:
>100_bases AGTTCGGAAAATCTATTCTGGGAAACCATGGAGCAGCTGAAAGCCCTCGGTGCTAGCTCAATTTTGGTGTTACCGATTGA AAAAATGATGGAGTAAGGCG
Downstream 100 bases:
>100_bases ATTATGGAAAAACTGGCTCGTCAACAAATTCAGGCGTTAACCCCATACCTTTCTGCGCGTCGTATTGGTGGTAGTGGTGA TGTTTGGCTCAATGCTAACG
Product: histidinol dehydrogenase
Products: NA
Alternate protein names: HDH [H]
Number of amino acids: Translated: 431; Mature: 431
Protein sequence:
>431_residues MRTVVWQSLSEAQQESILERPAITEGANITAAVAQVIAKVRSEGDAALFELTEKFDRVKPASLRVSREEMDAAAASLSET MKQALEQAYNNISKFHKAQKAQPIKVETMPGVVCEQVTRPINKVGLYIPGGSAPLPSTVLMLGVPAQIAGCRKVVLCSPP PIADEILYVAKLCNIDEVYNLGGGQAIAAMAYGTETVTKVDKIFGPGNAYVTEAKRQVSNDFRGAAIDMPAGPSEVLVIA DETADANFIAADLLSQAEHGPDSQVVLVTPSPVLADQVTDAVQKQLKVLSRASIAEKALASSLIIIAESLTQAVSISNYY GPEHLIVQTRNPRELVPLLDNAGSIFLGDWSPESVGDYASGTNHVLPTYGYTRTYSSLGLADFSKRMTVQELTADGLQLL APTVVTMAEAEGLDAHKRAVTIRVEKLQKAQ
Sequences:
>Translated_431_residues MRTVVWQSLSEAQQESILERPAITEGANITAAVAQVIAKVRSEGDAALFELTEKFDRVKPASLRVSREEMDAAAASLSET MKQALEQAYNNISKFHKAQKAQPIKVETMPGVVCEQVTRPINKVGLYIPGGSAPLPSTVLMLGVPAQIAGCRKVVLCSPP PIADEILYVAKLCNIDEVYNLGGGQAIAAMAYGTETVTKVDKIFGPGNAYVTEAKRQVSNDFRGAAIDMPAGPSEVLVIA DETADANFIAADLLSQAEHGPDSQVVLVTPSPVLADQVTDAVQKQLKVLSRASIAEKALASSLIIIAESLTQAVSISNYY GPEHLIVQTRNPRELVPLLDNAGSIFLGDWSPESVGDYASGTNHVLPTYGYTRTYSSLGLADFSKRMTVQELTADGLQLL APTVVTMAEAEGLDAHKRAVTIRVEKLQKAQ >Mature_431_residues MRTVVWQSLSEAQQESILERPAITEGANITAAVAQVIAKVRSEGDAALFELTEKFDRVKPASLRVSREEMDAAAASLSET MKQALEQAYNNISKFHKAQKAQPIKVETMPGVVCEQVTRPINKVGLYIPGGSAPLPSTVLMLGVPAQIAGCRKVVLCSPP PIADEILYVAKLCNIDEVYNLGGGQAIAAMAYGTETVTKVDKIFGPGNAYVTEAKRQVSNDFRGAAIDMPAGPSEVLVIA DETADANFIAADLLSQAEHGPDSQVVLVTPSPVLADQVTDAVQKQLKVLSRASIAEKALASSLIIIAESLTQAVSISNYY GPEHLIVQTRNPRELVPLLDNAGSIFLGDWSPESVGDYASGTNHVLPTYGYTRTYSSLGLADFSKRMTVQELTADGLQLL APTVVTMAEAEGLDAHKRAVTIRVEKLQKAQ
Specific function: Catalyzes the sequential NAD-dependent oxidations of L- histidinol to L-histidinaldehyde and then to L-histidine [H]
COG id: COG0141
COG function: function code E; Histidinol dehydrogenase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the histidinol dehydrogenase family [H]
Homologues:
Organism=Escherichia coli, GI1788331, Length=424, Percent_Identity=63.2075471698113, Blast_Score=553, Evalue=1e-158, Organism=Saccharomyces cerevisiae, GI6319819, Length=419, Percent_Identity=50.5966587112172, Blast_Score=404, Evalue=1e-113,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR016161 - InterPro: IPR022695 - InterPro: IPR001692 - InterPro: IPR012131 [H]
Pfam domain/function: PF00815 Histidinol_dh [H]
EC number: =1.1.1.23 [H]
Molecular weight: Translated: 46058; Mature: 46058
Theoretical pI: Translated: 4.88; Mature: 4.88
Prosite motif: PS00611 HISOL_DEHYDROGENASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRTVVWQSLSEAQQESILERPAITEGANITAAVAQVIAKVRSEGDAALFELTEKFDRVKP CCCHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCC ASLRVSREEMDAAAASLSETMKQALEQAYNNISKFHKAQKAQPIKVETMPGVVCEQVTRP HHHEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCHHHHHHHCC INKVGLYIPGGSAPLPSTVLMLGVPAQIAGCRKVVLCSPPPIADEILYVAKLCNIDEVYN HHHCEEEECCCCCCCCCHHEEECCCHHHCCCCEEEEECCCCHHHHHHHHHHHCCHHHHHC LGGGQAIAAMAYGTETVTKVDKIFGPGNAYVTEAKRQVSNDFRGAAIDMPAGPSEVLVIA CCCCCEEEEEHHCCHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCEEECCCCCCCEEEEE DETADANFIAADLLSQAEHGPDSQVVLVTPSPVLADQVTDAVQKQLKVLSRASIAEKALA ECCCCCHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH SSLIIIAESLTQAVSISNYYGPEHLIVQTRNPRELVPLLDNAGSIFLGDWSPESVGDYAS HHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHCCCCCEEEECCCCCCCCCCCC GTNHVLPTYGYTRTYSSLGLADFSKRMTVQELTADGLQLLAPTVVTMAEAEGLDAHKRAV CCCCCCCCCCCHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHEE TIRVEKLQKAQ EEEEHHHHCCC >Mature Secondary Structure MRTVVWQSLSEAQQESILERPAITEGANITAAVAQVIAKVRSEGDAALFELTEKFDRVKP CCCHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCC ASLRVSREEMDAAAASLSETMKQALEQAYNNISKFHKAQKAQPIKVETMPGVVCEQVTRP HHHEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCHHHHHHHCC INKVGLYIPGGSAPLPSTVLMLGVPAQIAGCRKVVLCSPPPIADEILYVAKLCNIDEVYN HHHCEEEECCCCCCCCCHHEEECCCHHHCCCCEEEEECCCCHHHHHHHHHHHCCHHHHHC LGGGQAIAAMAYGTETVTKVDKIFGPGNAYVTEAKRQVSNDFRGAAIDMPAGPSEVLVIA CCCCCEEEEEHHCCHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCEEECCCCCCCEEEEE DETADANFIAADLLSQAEHGPDSQVVLVTPSPVLADQVTDAVQKQLKVLSRASIAEKALA ECCCCCHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH SSLIIIAESLTQAVSISNYYGPEHLIVQTRNPRELVPLLDNAGSIFLGDWSPESVGDYAS HHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHCCCCCEEEECCCCCCCCCCCC GTNHVLPTYGYTRTYSSLGLADFSKRMTVQELTADGLQLLAPTVVTMAEAEGLDAHKRAV CCCCCCCCCCCHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHEE TIRVEKLQKAQ EEEEHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 10952301 [H]