| Definition | Vibrio cholerae O395 chromosome 2, complete sequence. |
|---|---|
| Accession | NC_009457 |
| Length | 3,024,069 |
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The map label for this gene is mshA [H]
Identifier: 147673812
GI number: 147673812
Start: 478651
End: 479748
Strand: Direct
Name: mshA [H]
Synonym: VC0395_A0450
Alternate gene names: 147673812
Gene position: 478651-479748 (Clockwise)
Preceding gene: 147673380
Following gene: 147674949
Centisome position: 15.83
GC content: 46.81
Gene sequence:
>1098_bases TTGTACCATCAAGGATGTACAGTGAGAAAAAACATTAATCTAATGATCGCCACAGATCTGAAAGGACAAGGTGGTGTGGC AACAGTGGTCTCAACCTACGCTGATTGTGGTTTTCTAGAAGAAAACCACATCAAGTTGATTGCCTCACACTCAAGTTTGG ACCACGGGCAGAAATGGCGAATGACATTGCGCTTTATGCTTGCACTCTGCCAATTGTTGTACTGCTTTATGCGTTACCGA GTCGGCATAGTACATATTCACATGTCATCAAGGGGAAGCTATCGACGTAAGTCTGTGATTATTCGTCTAGTTAAGCTTTT GAAAGGAAAGGTTATTCTGCACTTACATGGCGCCGAGTTTCGTGATTTCTATCGAGATGAGTGCAATATGGTTCAGCAAA GGCATATTCGACACACTTTTGCTTTGGCGGATCATGTGCTGGTTCTTTCAACTCAATGGCTCGCATGGCTACAAGAGGTC ATAGGTAGAACACAAGGCGTTTCTGTTCTGTATAACGCCGTACCCAGTTTGGCTTTAGATCGCCACCTTGCTCAACCTGG CCGTATTGCCTTCCTTGGTCGTTTGGGGACGCGCAAAGGAGTCGGTGATTTGATTCAAGCCTTTGCGTTAGTTAAGCAGC GCTGCCCAGAAGCACAGCTGTATCTTGCTGGCGATGGTGAGATTGAAACCTATCAAGCGATGGCTGAGCAGCTTGGCTTG AACGGGTCCGTTCACTGTTTAGGCTGGATAGCTGGCGAAGCTAAGCTCAAATTATTGACCCAAACTGATATTTACTGCTT ACCCAGTTATAACGAAGGTTTTCCTATGGGCGTTATAGAAGCTATGTCGGCAGGGATTCCCGTCGTCGCAAGTCGAGCGG GCGGAATTCCTGATGCGATCAGTGATGGTGAGCAAGGTCGTTTAATTGAGGCCGGTGATGTGGTTGCTTTAGCGCAAGCA CTCGGAGATCTGATTGAACAGCGTGCCGAAAATCAACGTATTGCGACCGCGGCGAAGCAAAAGTTTGCTGAAAACTTCTC TTTGCAAGCGGTGATCCCGCGTCTACAAACACTTTACGATGAGCTTTTAAAATCATGA
Upstream 100 bases:
>100_bases TCAGCAATACTCAAGCTCGCTTAGGAAGCTCGCTCAATGTCACGATAGACATAGTGTCAGCACTTGAGCGCACTGCAAAC GGTAAGATTCGCCAAGCGAT
Downstream 100 bases:
>100_bases AATCAACGACTGTAGCTGACATTAGCCAATGCTTATTGAATAAAGCTCGTACAGAACAATTCGCAGGATACGATCCTTTT GATGGGCTCAATTCAAGCTG
Product: putative polysaccharide biosynthesis protein
Products: NA
Alternate protein names: N-acetylglucosamine-inositol-phosphate N-acetylglucosaminyltransferase; GlcNAc-Ins-P N-acetylglucosaminyltransferase [H]
Number of amino acids: Translated: 365; Mature: 365
Protein sequence:
>365_residues MYHQGCTVRKNINLMIATDLKGQGGVATVVSTYADCGFLEENHIKLIASHSSLDHGQKWRMTLRFMLALCQLLYCFMRYR VGIVHIHMSSRGSYRRKSVIIRLVKLLKGKVILHLHGAEFRDFYRDECNMVQQRHIRHTFALADHVLVLSTQWLAWLQEV IGRTQGVSVLYNAVPSLALDRHLAQPGRIAFLGRLGTRKGVGDLIQAFALVKQRCPEAQLYLAGDGEIETYQAMAEQLGL NGSVHCLGWIAGEAKLKLLTQTDIYCLPSYNEGFPMGVIEAMSAGIPVVASRAGGIPDAISDGEQGRLIEAGDVVALAQA LGDLIEQRAENQRIATAAKQKFAENFSLQAVIPRLQTLYDELLKS
Sequences:
>Translated_365_residues MYHQGCTVRKNINLMIATDLKGQGGVATVVSTYADCGFLEENHIKLIASHSSLDHGQKWRMTLRFMLALCQLLYCFMRYR VGIVHIHMSSRGSYRRKSVIIRLVKLLKGKVILHLHGAEFRDFYRDECNMVQQRHIRHTFALADHVLVLSTQWLAWLQEV IGRTQGVSVLYNAVPSLALDRHLAQPGRIAFLGRLGTRKGVGDLIQAFALVKQRCPEAQLYLAGDGEIETYQAMAEQLGL NGSVHCLGWIAGEAKLKLLTQTDIYCLPSYNEGFPMGVIEAMSAGIPVVASRAGGIPDAISDGEQGRLIEAGDVVALAQA LGDLIEQRAENQRIATAAKQKFAENFSLQAVIPRLQTLYDELLKS >Mature_365_residues MYHQGCTVRKNINLMIATDLKGQGGVATVVSTYADCGFLEENHIKLIASHSSLDHGQKWRMTLRFMLALCQLLYCFMRYR VGIVHIHMSSRGSYRRKSVIIRLVKLLKGKVILHLHGAEFRDFYRDECNMVQQRHIRHTFALADHVLVLSTQWLAWLQEV IGRTQGVSVLYNAVPSLALDRHLAQPGRIAFLGRLGTRKGVGDLIQAFALVKQRCPEAQLYLAGDGEIETYQAMAEQLGL NGSVHCLGWIAGEAKLKLLTQTDIYCLPSYNEGFPMGVIEAMSAGIPVVASRAGGIPDAISDGEQGRLIEAGDVVALAQA LGDLIEQRAENQRIATAAKQKFAENFSLQAVIPRLQTLYDELLKS
Specific function: Catalyzes the transfer of a N-acetyl-glucosamine moiety to 1D-myo-inositol 3-phosphate to produce 1D-myo-inositol 2- acetamido-2-deoxy-glucopyranoside 3-phosphate in the mycothiol biosynthesis pathway [H]
COG id: COG0438
COG function: function code M; Glycosyltransferase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the glycosyltransferase 1 family. MshA subfamily [H]
Homologues:
Organism=Escherichia coli, GI1788357, Length=307, Percent_Identity=24.7557003257329, Blast_Score=64, Evalue=2e-11, Organism=Caenorhabditis elegans, GI17532709, Length=206, Percent_Identity=29.6116504854369, Blast_Score=71, Evalue=1e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001296 - InterPro: IPR017814 [H]
Pfam domain/function: PF00534 Glycos_transf_1 [H]
EC number: =2.4.1.250 [H]
Molecular weight: Translated: 40500; Mature: 40500
Theoretical pI: Translated: 8.71; Mature: 8.71
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.2 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 4.9 %Cys+Met (Translated Protein) 2.2 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 4.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MYHQGCTVRKNINLMIATDLKGQGGVATVVSTYADCGFLEENHIKLIASHSSLDHGQKWR CCCCCCEEEECCEEEEEECCCCCCCHHHHHHHHHHCCCCCCCCEEEEEECCCCCCCHHHH MTLRFMLALCQLLYCFMRYRVGIVHIHMSSRGSYRRKSVIIRLVKLLKGKVILHLHGAEF HHHHHHHHHHHHHHHHHHHCCEEEEEEECCCCCHHHHHHHHHHHHHHCCCEEEEECCCHH RDFYRDECNMVQQRHIRHTFALADHVLVLSTQWLAWLQEVIGRTQGVSVLYNAVPSLALD HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHH RHLAQPGRIAFLGRLGTRKGVGDLIQAFALVKQRCPEAQLYLAGDGEIETYQAMAEQLGL HHHCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHHHCC NGSVHCLGWIAGEAKLKLLTQTDIYCLPSYNEGFPMGVIEAMSAGIPVVASRAGGIPDAI CCCEEEEEEEECCCEEEEEEECCEEEECCCCCCCCHHHHHHHHCCCCEEECCCCCCCCCC SDGEQGRLIEAGDVVALAQALGDLIEQRAENQRIATAAKQKFAENFSLQAVIPRLQTLYD CCCCCCCEEECCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHH ELLKS HHHCC >Mature Secondary Structure MYHQGCTVRKNINLMIATDLKGQGGVATVVSTYADCGFLEENHIKLIASHSSLDHGQKWR CCCCCCEEEECCEEEEEECCCCCCCHHHHHHHHHHCCCCCCCCEEEEEECCCCCCCHHHH MTLRFMLALCQLLYCFMRYRVGIVHIHMSSRGSYRRKSVIIRLVKLLKGKVILHLHGAEF HHHHHHHHHHHHHHHHHHHCCEEEEEEECCCCCHHHHHHHHHHHHHHCCCEEEEECCCHH RDFYRDECNMVQQRHIRHTFALADHVLVLSTQWLAWLQEVIGRTQGVSVLYNAVPSLALD HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHH RHLAQPGRIAFLGRLGTRKGVGDLIQAFALVKQRCPEAQLYLAGDGEIETYQAMAEQLGL HHHCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHHHCC NGSVHCLGWIAGEAKLKLLTQTDIYCLPSYNEGFPMGVIEAMSAGIPVVASRAGGIPDAI CCCEEEEEEEECCCEEEEEEECCEEEECCCCCCCCHHHHHHHHCCCCEEECCCCCCCCCC SDGEQGRLIEAGDVVALAQALGDLIEQRAENQRIATAAKQKFAENFSLQAVIPRLQTLYD CCCCCCCEEECCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHH ELLKS HHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA