| Definition | Vibrio cholerae O395 chromosome 2, complete sequence. |
|---|---|
| Accession | NC_009457 |
| Length | 3,024,069 |
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The map label for this gene is capK [H]
Identifier: 147673380
GI number: 147673380
Start: 477335
End: 478675
Strand: Direct
Name: capK [H]
Synonym: VC0395_A0449
Alternate gene names: 147673380
Gene position: 477335-478675 (Clockwise)
Preceding gene: 147675712
Following gene: 147673812
Centisome position: 15.78
GC content: 45.94
Gene sequence:
>1341_bases ATGTTTACCAGTTCACTTTATGTTAAAGCACCAATCTGGCTGCAAAATGTCATGCTTTCTGTGCGGGCGCTGTCACGCCA AATGGTCAGAGAAAATGGTGAGATGCGTGCGGTGTTGCAAGAGATCCAAGCTAACGAGTTTTCACGTACTCATTTAGCGG ATTATCAACACAAGCAGCTAAAAAAAACCTTGGAGAATGCTCGTAACCATGTGCCGTTTTATCAGGATTTAGAGGTGCCT AATCTTGAGCTTGAGGCCTTCCCTTATATGGATAAATCCGTATTACGCCGTGATCACAAACAGTTTATCTCACAAAATAA ACCGTCAGTGGTGGTGAAAGGGGCGACCAGTGGCACAACGGGTACACCTCTGACTATTTTGCAAGATAGGCATTCGGTTA TTCGTGAACAAGCCTTTGTCGCAAGACAGTTGGCTTGGGCGGGATATCGTAAAGGGGATAAACGAGCGTGGATCCGTGGC GATATGGTGGTGCCATTAAGTCAAAAGCAAGGACCATTCTGGCGCTACTCTTGGTTTGAGCAGATGATAGTGTTGTCCTC TTTCCATCTGACACCGAAAACGATGTCGAGTTACCTGCAAGCCATGGTCGATTTTGGGGTTGAAGTGATTCAGGCATACC CTTCTTCGATTGCTACGTTAGCCCGCTATTTAGAAGCCAACCAAAGTTATTATCCGGCGAAGCTCAAATCGATTATGACT TCATCAGAATCGTTGTCAGCAGAAGATAGACAGGTGATTGAGACACGCTTTGGCTGCAAAGTTTTTGACTGGTATGGCCT ATTTGAGCGAGTGGCTGCGATAGGGCAGTGTGAGCATGGTCGCTACCATTTGCTCTCCGACTATTCACATGTGGAATTGT TAGCCGCAGGCGACGGGCGTTACGAGTTGGTCGGCACTAACTTTAATAATCAATATTTCCCTTTGATCCGCTATAAGACC GGTGATCATGTGCATTTATCTGAAAACGAGGCTTGTCCTTGTGGTCGAGTCTTTCCTGTGATCGAGCGTATTGAGGGAAG GATTGGTGATTATCTCGTCGGTGAAGATGGTCAAAAAGTGCATATTCTTAACCATATACCCAAAGGTATCGCTGGGATTA TGGCATGCCAATTTGTGCAGAGTGAACGAGGGCAGATTGTGGTGAAAGTGGTGGCTGATGCAGAGCAATTTAATCAAGAG CAGCAAAAACAGTTAATCAGCAATACTCAAGCTCGCTTAGGAAGCTCGCTCAATGTCACGATAGACATAGTGTCAGCACT TGAGCGCACTGCAAACGGTAAGATTCGCCAAGCGATTTGTACCATCAAGGATGTACAGTGA
Upstream 100 bases:
>100_bases CGAATGCTGTGGTACTTGAAGATGTCCCGCCTTACAGCGTTGTAGTCGGAATGCCCGCCAAAGTGATCAAAACAAATATT AATCCCAAGGACTTTTACTG
Downstream 100 bases:
>100_bases GAAAAAACATTAATCTAATGATCGCCACAGATCTGAAAGGACAAGGTGGTGTGGCAACAGTGGTCTCAACCTACGCTGAT TGTGGTTTTCTAGAAGAAAA
Product: putative capK protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 446; Mature: 446
Protein sequence:
>446_residues MFTSSLYVKAPIWLQNVMLSVRALSRQMVRENGEMRAVLQEIQANEFSRTHLADYQHKQLKKTLENARNHVPFYQDLEVP NLELEAFPYMDKSVLRRDHKQFISQNKPSVVVKGATSGTTGTPLTILQDRHSVIREQAFVARQLAWAGYRKGDKRAWIRG DMVVPLSQKQGPFWRYSWFEQMIVLSSFHLTPKTMSSYLQAMVDFGVEVIQAYPSSIATLARYLEANQSYYPAKLKSIMT SSESLSAEDRQVIETRFGCKVFDWYGLFERVAAIGQCEHGRYHLLSDYSHVELLAAGDGRYELVGTNFNNQYFPLIRYKT GDHVHLSENEACPCGRVFPVIERIEGRIGDYLVGEDGQKVHILNHIPKGIAGIMACQFVQSERGQIVVKVVADAEQFNQE QQKQLISNTQARLGSSLNVTIDIVSALERTANGKIRQAICTIKDVQ
Sequences:
>Translated_446_residues MFTSSLYVKAPIWLQNVMLSVRALSRQMVRENGEMRAVLQEIQANEFSRTHLADYQHKQLKKTLENARNHVPFYQDLEVP NLELEAFPYMDKSVLRRDHKQFISQNKPSVVVKGATSGTTGTPLTILQDRHSVIREQAFVARQLAWAGYRKGDKRAWIRG DMVVPLSQKQGPFWRYSWFEQMIVLSSFHLTPKTMSSYLQAMVDFGVEVIQAYPSSIATLARYLEANQSYYPAKLKSIMT SSESLSAEDRQVIETRFGCKVFDWYGLFERVAAIGQCEHGRYHLLSDYSHVELLAAGDGRYELVGTNFNNQYFPLIRYKT GDHVHLSENEACPCGRVFPVIERIEGRIGDYLVGEDGQKVHILNHIPKGIAGIMACQFVQSERGQIVVKVVADAEQFNQE QQKQLISNTQARLGSSLNVTIDIVSALERTANGKIRQAICTIKDVQ >Mature_446_residues MFTSSLYVKAPIWLQNVMLSVRALSRQMVRENGEMRAVLQEIQANEFSRTHLADYQHKQLKKTLENARNHVPFYQDLEVP NLELEAFPYMDKSVLRRDHKQFISQNKPSVVVKGATSGTTGTPLTILQDRHSVIREQAFVARQLAWAGYRKGDKRAWIRG DMVVPLSQKQGPFWRYSWFEQMIVLSSFHLTPKTMSSYLQAMVDFGVEVIQAYPSSIATLARYLEANQSYYPAKLKSIMT SSESLSAEDRQVIETRFGCKVFDWYGLFERVAAIGQCEHGRYHLLSDYSHVELLAAGDGRYELVGTNFNNQYFPLIRYKT GDHVHLSENEACPCGRVFPVIERIEGRIGDYLVGEDGQKVHILNHIPKGIAGIMACQFVQSERGQIVVKVVADAEQFNQE QQKQLISNTQARLGSSLNVTIDIVSALERTANGKIRQAICTIKDVQ
Specific function: Required for the biosynthesis of type 1 capsular polysaccharide [H]
COG id: COG1541
COG function: function code H; Coenzyme F390 synthetase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 50732; Mature: 50732
Theoretical pI: Translated: 8.70; Mature: 8.70
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFTSSLYVKAPIWLQNVMLSVRALSRQMVRENGEMRAVLQEIQANEFSRTHLADYQHKQL CCCCCEEEECHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCHHHHHHHHHHHH KKTLENARNHVPFYQDLEVPNLELEAFPYMDKSVLRRDHKQFISQNKPSVVVKGATSGTT HHHHHHHHHCCCCCCCCCCCCCEEEECCCCCHHHHHHHHHHHHHCCCCCEEEECCCCCCC GTPLTILQDRHSVIREQAFVARQLAWAGYRKGDKRAWIRGDMVVPLSQKQGPFWRYSWFE CCCEEEEHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEECCEEEECCCCCCCCCHHHHHH QMIVLSSFHLTPKTMSSYLQAMVDFGVEVIQAYPSSIATLARYLEANQSYYPAKLKSIMT HHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHH SSESLSAEDRQVIETRFGCKVFDWYGLFERVAAIGQCEHGRYHLLSDYSHVELLAAGDGR CCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCEEEECCCCEEEEEEECCCE YELVGTNFNNQYFPLIRYKTGDHVHLSENEACPCGRVFPVIERIEGRIGDYLVGEDGQKV EEEEECCCCCCEEEEEEECCCCEEEECCCCCCCCCHHHHHHHHHHHHHCCEEECCCCCEE HILNHIPKGIAGIMACQFVQSERGQIVVKVVADAEQFNQEQQKQLISNTQARLGSSLNVT EEHHHCCHHHHHHHHHHHHHCCCCCEEEEEECCHHHHCHHHHHHHHHHHHHHCCCCCEEE IDIVSALERTANGKIRQAICTIKDVQ HHHHHHHHHHCCCHHHHHHHHHCCCC >Mature Secondary Structure MFTSSLYVKAPIWLQNVMLSVRALSRQMVRENGEMRAVLQEIQANEFSRTHLADYQHKQL CCCCCEEEECHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCHHHHHHHHHHHH KKTLENARNHVPFYQDLEVPNLELEAFPYMDKSVLRRDHKQFISQNKPSVVVKGATSGTT HHHHHHHHHCCCCCCCCCCCCCEEEECCCCCHHHHHHHHHHHHHCCCCCEEEECCCCCCC GTPLTILQDRHSVIREQAFVARQLAWAGYRKGDKRAWIRGDMVVPLSQKQGPFWRYSWFE CCCEEEEHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEECCEEEECCCCCCCCCHHHHHH QMIVLSSFHLTPKTMSSYLQAMVDFGVEVIQAYPSSIATLARYLEANQSYYPAKLKSIMT HHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHH SSESLSAEDRQVIETRFGCKVFDWYGLFERVAAIGQCEHGRYHLLSDYSHVELLAAGDGR CCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCEEEECCCCEEEEEEECCCE YELVGTNFNNQYFPLIRYKTGDHVHLSENEACPCGRVFPVIERIEGRIGDYLVGEDGQKV EEEEECCCCCCEEEEEEECCCCEEEECCCCCCCCCHHHHHHHHHHHHHCCEEECCCCCEE HILNHIPKGIAGIMACQFVQSERGQIVVKVVADAEQFNQEQQKQLISNTQARLGSSLNVT EEHHHCCHHHHHHHHHHHHHCCCCCEEEEEECCHHHHCHHHHHHHHHHHHHHCCCCCEEE IDIVSALERTANGKIRQAICTIKDVQ HHHHHHHHHHCCCHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 7961465 [H]