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The map label for this gene is fliS

Identifier: 147673727

GI number: 147673727

Start: 1846101

End: 1846511

Strand: Reverse

Name: fliS

Synonym: VC0395_A1722

Alternate gene names: 147673727

Gene position: 1846511-1846101 (Counterclockwise)

Preceding gene: 147673154

Following gene: 147675013

Centisome position: 61.06

GC content: 46.23

Gene sequence:

>411_bases
ATGCGTGGTTCTTTACAGGCGTACAAAAAAGTATCAGTGGATAGCCAGCTAAGTGCGGCCTCACCGCATAAAATCGTCCA
GATGTTAATGGCCGGAGCGATTGAGCGCCTGATCCAAGGTAAGGCGGCAATGCAGCAAGGTAACATCCCTGTGAAAGGCG
AACGTTTAGGTAAAGCCTTGGATATCATCATTAGCCTACGCAGCTGCTTGTCGATGGAAGACGGTGGCGACATCGCCAAA
AATCTCGATCAACTGTATGACTTTATGGTCAACCAAATTACTCAAGCGAACCATAAAAATGATCCGCAAATGCTCGATGA
TGTGATTGAGATCATCCGTGAAATAAAGTCAGCTTGGGATCAAATTCCACCGGAATATCACAACTTGACTGCCGCTGAAG
TGGGTATTTGA

Upstream 100 bases:

>100_bases
ATGCAGTTAAAAACGGCGGCGATGGGGCAAACACTCCACAAATATCGTCACGGAAATAAATCGGTTCAGCAATACAAAAA
GTTTTTATAAGAGGAAGACT

Downstream 100 bases:

>100_bases
TTTCTGTCAGAGAAACTTTTAACAGATATCACACCCAGCAAATGCTTGGTTGCCTTATTTGCTGATTTAAATAGAATAGA
AGCCACTAACTAGCCAAGTG

Product: flagellar protein FliS

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 136; Mature: 136

Protein sequence:

>136_residues
MRGSLQAYKKVSVDSQLSAASPHKIVQMLMAGAIERLIQGKAAMQQGNIPVKGERLGKALDIIISLRSCLSMEDGGDIAK
NLDQLYDFMVNQITQANHKNDPQMLDDVIEIIREIKSAWDQIPPEYHNLTAAEVGI

Sequences:

>Translated_136_residues
MRGSLQAYKKVSVDSQLSAASPHKIVQMLMAGAIERLIQGKAAMQQGNIPVKGERLGKALDIIISLRSCLSMEDGGDIAK
NLDQLYDFMVNQITQANHKNDPQMLDDVIEIIREIKSAWDQIPPEYHNLTAAEVGI
>Mature_136_residues
MRGSLQAYKKVSVDSQLSAASPHKIVQMLMAGAIERLIQGKAAMQQGNIPVKGERLGKALDIIISLRSCLSMEDGGDIAK
NLDQLYDFMVNQITQANHKNDPQMLDDVIEIIREIKSAWDQIPPEYHNLTAAEVGI

Specific function: Not Known. [C]

COG id: COG1516

COG function: function code NUO; Flagellin-specific chaperone FliS

Gene ontology:

Cell location: Cytoplasm, cytosol (Probable)

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the fliS family

Homologues:

Organism=Escherichia coli, GI1788234, Length=117, Percent_Identity=35.8974358974359, Blast_Score=75, Evalue=2e-15,

Paralogues:

None

Copy number: 10-20 (rich media) [C]

Swissprot (AC and ID): FLIS_VIBCH (Q9KQ65)

Other databases:

- EMBL:   AE003852
- PIR:   E82111
- RefSeq:   NP_231769.1
- ProteinModelPortal:   Q9KQ65
- SMR:   Q9KQ65
- GeneID:   2613274
- GenomeReviews:   AE003852_GR
- KEGG:   vch:VC2138
- TIGR:   VC_2138
- HOGENOM:   HBG692036
- OMA:   AQSRYAI
- ProtClustDB:   PRK05685
- GO:   GO:0005829
- InterPro:   IPR003713
- Gene3D:   G3DSA:1.20.120.340
- TIGRFAMs:   TIGR00208

Pfam domain/function: PF02561 FliS; SSF101116 FliS

EC number: NA

Molecular weight: Translated: 15016; Mature: 15016

Theoretical pI: Translated: 5.65; Mature: 5.65

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
5.1 %Met     (Translated Protein)
5.9 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
5.1 %Met     (Mature Protein)
5.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRGSLQAYKKVSVDSQLSAASPHKIVQMLMAGAIERLIQGKAAMQQGNIPVKGERLGKAL
CCCHHHHHHHHCCCCHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHH
DIIISLRSCLSMEDGGDIAKNLDQLYDFMVNQITQANHKNDPQMLDDVIEIIREIKSAWD
HHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHH
QIPPEYHNLTAAEVGI
HCCCHHHCCCHHHHCC
>Mature Secondary Structure
MRGSLQAYKKVSVDSQLSAASPHKIVQMLMAGAIERLIQGKAAMQQGNIPVKGERLGKAL
CCCHHHHHHHHCCCCHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHH
DIIISLRSCLSMEDGGDIAKNLDQLYDFMVNQITQANHKNDPQMLDDVIEIIREIKSAWD
HHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHH
QIPPEYHNLTAAEVGI
HCCCHHHCCCHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 10952301