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The map label for this gene is yfcB [C]

Identifier: 147673603

GI number: 147673603

Start: 1826628

End: 1827572

Strand: Reverse

Name: yfcB [C]

Synonym: VC0395_A1700

Alternate gene names: 147673603

Gene position: 1827572-1826628 (Counterclockwise)

Preceding gene: 147674451

Following gene: 147675123

Centisome position: 60.43

GC content: 49.31

Gene sequence:

>945_bases
TTGGAGGCAATTTTGGATAAGATTTTCGTTGAGGAAGCGGTTTCTGAACTGCATACCTTGCAAGACATGATTCGTTGGAC
TGTGAGTCGATTTAACGCTGCGAACCTGTTTTATGGTCAAGGCACGGACAACGCTTGGGATGAAGCGGTACAACTCATTC
TGCCAACGCTCTATCTGCCGATTGATGTGCCTCCGCATGTGCTGAGTTCGCGCTTAACCAGCAGCGAGCGTTTACGTGTG
GTAGAACGCGTGATCAAACGCATTAACGATCGTACCCCCGTGGCGTATCTGACCAACAAAGCGTGGTTTTGTGGCCTTGA
GTTTTTCGTTGACTCGCGAGTACTGGTTCCGCGTTCGCCGATCGGAGAGCTGATCCAAAACCGCTTTGAACCTTGGTTGA
CAGAAGAGCCAACCCGCATCATGGATCTGTGTACCGGCAGCGGTTGTATCGCGATTGCTTGTGCCAATGCTTTCCCAGAA
GCAGAAGTCGATGCGATTGATATTTCAGTCGATGCGCTGAACGTCGCCGAGCAAAACATTCAAGATCACGGTCTAGAACA
GCAAGTTTTCCCTATCCGTTCCGATCTTTTCCGTGATTTGCCACAAGAGCAGTATGACCTGATTGTGACCAATCCACCTT
ATGTGGATCAGGAAGATATGGATAGCTTACCAAGTGAGTTCCGTCATGAACCTGAGCTCGGTCTTGCTGCGGGCAGTGAT
GGCTTGAAACTGGCTCGCCGTATTCTGGCTAATGCCCCACTGTATCTAAAAGAGAACGGGATTTTGGTGTGTGAGGTTGG
TAACTCCATGGTGCATATGATGGAACAGTACCCGCACATCCCATTTACGTGGTTAGAGTTTGAAAATGGCGGTCACGGCG
TATTTTTGCTGACTCGTGAACAGCTTATCGACTGTGCGGCGGATTTTGCGCTGTACAAAGATTAA

Upstream 100 bases:

>100_bases
CTTTATCGCTCTTGTTATGGGTAATTCGGTGATCGTTTTTGCTCATTAGGGTGACGTGTTTTTGTTACTGTAAATGGATG
ACGCGGTATTGTAGCGCTTT

Downstream 100 bases:

>100_bases
TGATGACACGCTGAATGGATGCCAACGCCGACCTTTGAGTCGGCGTTTTTTATGGCATATAAACAGCCGAAAGACCTTGG
ACAAGGTGGTGAATAGCACC

Product: N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 314; Mature: 314

Protein sequence:

>314_residues
MEAILDKIFVEEAVSELHTLQDMIRWTVSRFNAANLFYGQGTDNAWDEAVQLILPTLYLPIDVPPHVLSSRLTSSERLRV
VERVIKRINDRTPVAYLTNKAWFCGLEFFVDSRVLVPRSPIGELIQNRFEPWLTEEPTRIMDLCTGSGCIAIACANAFPE
AEVDAIDISVDALNVAEQNIQDHGLEQQVFPIRSDLFRDLPQEQYDLIVTNPPYVDQEDMDSLPSEFRHEPELGLAAGSD
GLKLARRILANAPLYLKENGILVCEVGNSMVHMMEQYPHIPFTWLEFENGGHGVFLLTREQLIDCAADFALYKD

Sequences:

>Translated_314_residues
MEAILDKIFVEEAVSELHTLQDMIRWTVSRFNAANLFYGQGTDNAWDEAVQLILPTLYLPIDVPPHVLSSRLTSSERLRV
VERVIKRINDRTPVAYLTNKAWFCGLEFFVDSRVLVPRSPIGELIQNRFEPWLTEEPTRIMDLCTGSGCIAIACANAFPE
AEVDAIDISVDALNVAEQNIQDHGLEQQVFPIRSDLFRDLPQEQYDLIVTNPPYVDQEDMDSLPSEFRHEPELGLAAGSD
GLKLARRILANAPLYLKENGILVCEVGNSMVHMMEQYPHIPFTWLEFENGGHGVFLLTREQLIDCAADFALYKD
>Mature_314_residues
MEAILDKIFVEEAVSELHTLQDMIRWTVSRFNAANLFYGQGTDNAWDEAVQLILPTLYLPIDVPPHVLSSRLTSSERLRV
VERVIKRINDRTPVAYLTNKAWFCGLEFFVDSRVLVPRSPIGELIQNRFEPWLTEEPTRIMDLCTGSGCIAIACANAFPE
AEVDAIDISVDALNVAEQNIQDHGLEQQVFPIRSDLFRDLPQEQYDLIVTNPPYVDQEDMDSLPSEFRHEPELGLAAGSD
GLKLARRILANAPLYLKENGILVCEVGNSMVHMMEQYPHIPFTWLEFENGGHGVFLLTREQLIDCAADFALYKD

Specific function: Unknown

COG id: COG2890

COG function: function code J; Methylase of polypeptide chain release factors

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the N(4)/N(6)-methyltransferase family

Homologues:

Organism=Homo sapiens, GI7705409, Length=226, Percent_Identity=28.3185840707965, Blast_Score=83, Evalue=3e-16,
Organism=Escherichia coli, GI87082085, Length=310, Percent_Identity=71.9354838709677, Blast_Score=488, Evalue=1e-139,
Organism=Escherichia coli, GI1787463, Length=194, Percent_Identity=33.5051546391753, Blast_Score=105, Evalue=3e-24,
Organism=Drosophila melanogaster, GI24582226, Length=199, Percent_Identity=25.6281407035176, Blast_Score=70, Evalue=2e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y2118_VIBCH (Q9KQ83)

Other databases:

- EMBL:   AE003852
- PIR:   H82115
- RefSeq:   NP_231749.1
- ProteinModelPortal:   Q9KQ83
- SMR:   Q9KQ83
- GeneID:   2613374
- GenomeReviews:   AE003852_GR
- KEGG:   vch:VC2118
- TIGR:   VC_2118
- HOGENOM:   HBG732041
- OMA:   VGNSQVH
- ProtClustDB:   PRK11805
- BRENDA:   2.1.1.72
- GO:   GO:0005622
- InterPro:   IPR002052
- InterPro:   IPR004556
- InterPro:   IPR017127
- InterPro:   IPR007848
- PIRSF:   PIRSF037167
- TIGRFAMs:   TIGR00536
- TIGRFAMs:   TIGR03533

Pfam domain/function: PF05175 MTS

EC number: =2.1.1.72

Molecular weight: Translated: 35579; Mature: 35579

Theoretical pI: Translated: 4.25; Mature: 4.25

Prosite motif: PS00092 N6_MTASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEAILDKIFVEEAVSELHTLQDMIRWTVSRFNAANLFYGQGTDNAWDEAVQLILPTLYLP
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHHHHHHEEC
IDVPPHVLSSRLTSSERLRVVERVIKRINDRTPVAYLTNKAWFCGLEFFVDSRVLVPRSP
CCCCHHHHHHHCCCHHHHHHHHHHHHHHCCCCCEEEEECCHHEEHHHHHHCCEEECCCCC
IGELIQNRFEPWLTEEPTRIMDLCTGSGCIAIACANAFPEAEVDAIDISVDALNVAEQNI
HHHHHHHHCCCCCCCCCHHHHHHHCCCCEEEEEECCCCCCCCCEEEEEEHHHHHHHHHHH
QDHGLEQQVFPIRSDLFRDLPQEQYDLIVTNPPYVDQEDMDSLPSEFRHEPELGLAAGSD
HHCCCCHHHHHHHHHHHHHCCCCCCCEEECCCCCCCHHHHHHCHHHHCCCCCCCEECCCH
GLKLARRILANAPLYLKENGILVCEVGNSMVHMMEQYPHIPFTWLEFENGGHGVFLLTRE
HHHHHHHHHHCCCEEEECCCEEEEECCCHHHHHHHHCCCCCEEEEEEECCCCEEEEEEHH
QLIDCAADFALYKD
HHHHHHHHHHHCCC
>Mature Secondary Structure
MEAILDKIFVEEAVSELHTLQDMIRWTVSRFNAANLFYGQGTDNAWDEAVQLILPTLYLP
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHHHHHHEEC
IDVPPHVLSSRLTSSERLRVVERVIKRINDRTPVAYLTNKAWFCGLEFFVDSRVLVPRSP
CCCCHHHHHHHCCCHHHHHHHHHHHHHHCCCCCEEEEECCHHEEHHHHHHCCEEECCCCC
IGELIQNRFEPWLTEEPTRIMDLCTGSGCIAIACANAFPEAEVDAIDISVDALNVAEQNI
HHHHHHHHCCCCCCCCCHHHHHHHCCCCEEEEEECCCCCCCCCEEEEEEHHHHHHHHHHH
QDHGLEQQVFPIRSDLFRDLPQEQYDLIVTNPPYVDQEDMDSLPSEFRHEPELGLAAGSD
HHCCCCHHHHHHHHHHHHHCCCCCCCEEECCCCCCCHHHHHHCHHHHCCCCCCCEECCCH
GLKLARRILANAPLYLKENGILVCEVGNSMVHMMEQYPHIPFTWLEFENGGHGVFLLTRE
HHHHHHHHHHCCCEEEECCCEEEEECCCHHHHHHHHCCCCCEEEEEEECCCCEEEEEEHH
QLIDCAADFALYKD
HHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 10952301