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The map label for this gene is alpA [C]

Identifier: 147673587

GI number: 147673587

Start: 1488904

End: 1489110

Strand: Reverse

Name: alpA [C]

Synonym: VC0395_A1382

Alternate gene names: 147673587

Gene position: 1489110-1488904 (Counterclockwise)

Preceding gene: 147673665

Following gene: 147673037

Centisome position: 49.24

GC content: 44.44

Gene sequence:

>207_bases
ATGGGACAACAAGACATAGGAGAACATCCCATGAGATTTCTGAAACTAAAAGAAGTAATGGAAAAGACCGCACTAAGCCG
TTCAGCAATTTACCGAAAAATGAATGATGGCGAGTTTCCACAGTCGGTGAGCTTGGGAGAAAGGGCTATTGCCTGGGTGG
AAAGCGAAGTGGATGAGTGGATGGACTTTTGTCTTAAACAGCGATGA

Upstream 100 bases:

>100_bases
ACAATAGTGGGAAGGTTCACAGTGATGACATATATCTAAATTGGCTTTGAATATAGGTAAGGGACTGATTTAACTATTTT
TTACAGAGTCAGTTCATCCC

Downstream 100 bases:

>100_bases
TGGCGTGATTATACATGCGTCATGTACTATAGCTGAGAGTGTAAGGTGCCTGATTTGTCAATTTGAGTACTGGTTTGAAA
CGGTGACGAGAAATAAGCTG

Product: transcriptional regulator

Products: NA

Alternate protein names: Prophage Protein

Number of amino acids: Translated: 68; Mature: 67

Protein sequence:

>68_residues
MGQQDIGEHPMRFLKLKEVMEKTALSRSAIYRKMNDGEFPQSVSLGERAIAWVESEVDEWMDFCLKQR

Sequences:

>Translated_68_residues
MGQQDIGEHPMRFLKLKEVMEKTALSRSAIYRKMNDGEFPQSVSLGERAIAWVESEVDEWMDFCLKQR
>Mature_67_residues
GQQDIGEHPMRFLKLKEVMEKTALSRSAIYRKMNDGEFPQSVSLGERAIAWVESEVDEWMDFCLKQR

Specific function: Positive Regulator Of The Expression Of The Slpa Gene. [C]

COG id: COG3311

COG function: function code K; Predicted transcriptional regulator

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 7978; Mature: 7847

Theoretical pI: Translated: 5.08; Mature: 5.08

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
7.4 %Met     (Translated Protein)
8.8 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
6.0 %Met     (Mature Protein)
7.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGQQDIGEHPMRFLKLKEVMEKTALSRSAIYRKMNDGEFPQSVSLGERAIAWVESEVDEW
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHH
MDFCLKQR
HHHHHCCC
>Mature Secondary Structure 
GQQDIGEHPMRFLKLKEVMEKTALSRSAIYRKMNDGEFPQSVSLGERAIAWVESEVDEW
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHH
MDFCLKQR
HHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA