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The map label for this gene is petC [H]

Identifier: 147673543

GI number: 147673543

Start: 96859

End: 97596

Strand: Direct

Name: petC [H]

Synonym: VC0395_A0107

Alternate gene names: 147673543

Gene position: 96859-97596 (Clockwise)

Preceding gene: 147674128

Following gene: 147675668

Centisome position: 3.2

GC content: 44.44

Gene sequence:

>738_bases
ATGAAAAAATGGATTGTAGTTTTGTTTGCTATGCTGCCTTCACTGGCGATGGCGGCTGGAGCAAATGTGCATTTAGATAA
AGCGAATAACGATTTGACGGATCAGGCTTCGCTACAAAATGGTGCCAAGCTGTTTATGAATTACTGCTTTGGTTGCCATT
CTACTCAATATCAACGTTATGAACGGGTTGCCAATGATCTTGGCATCCCAGCTGATTTAATGAAGGAAAACCTGATTTTT
GATCCTGAGACCAAAATTGGTCAATTGATGGAAAATGCGATTCCCGATAAATCGGCAGCGAAATGGTTTGGTGCGCCACC
ACCAGATTTGACACTGGTTGCTCGTGTGCGTGGAACCGATTGGTTGTATACCTATTTGCGCTCATTTTACACGGATCCTT
CACGTCCTTTTGGCGTGAATAACATTGTGTTTCCAAGCGTAGGTATGCCCCATGTTCTTGAAGAGCTTCAAGGTACTCCT
GAGCCTATTTTTGAAACCAAAGTCGTCGATGGCAATGAGGTTCAACATGTGGTTGGCGTGAAGTCACGTGGAAACGGTGA
ATTGAGTGAAGGGGAATATAACCAAGCAGTACGTGACTTGGTGAATTTCTTGGAATATTCCGGTGAGCCGATGAAGCTTG
AGCGCCAAAACTTAGGCTGGTGGACAATGGGTTTCTTAGTGATCTTCACCATTGTCGTTGTCGCACTCAAGAAAGAGTAT
TGGCGTGATGTGCACTAA

Upstream 100 bases:

>100_bases
CTCAGATATTTAGCTTGTGTTACTTCATGTTCTTTGTGTTGCTGTTCTTCTACAGCAAAAACGAAGCCACTAAGCCATTA
CCAACAAGGGTGACATACAA

Downstream 100 bases:

>100_bases
TTGTGCTATTATGCTGCGCTAATTCCCGATTGTTAACTCATCAGTGGAGGCTCTAGCCTCCATTGATTTTTTGTACCCGC
ATCTGTACTGGAGGGCTCCA

Product: ubiquinol--cytochrome c reductase, cytochrome c1

Products: Q; ferrocytochrome c

Alternate protein names: NA

Number of amino acids: Translated: 245; Mature: 245

Protein sequence:

>245_residues
MKKWIVVLFAMLPSLAMAAGANVHLDKANNDLTDQASLQNGAKLFMNYCFGCHSTQYQRYERVANDLGIPADLMKENLIF
DPETKIGQLMENAIPDKSAAKWFGAPPPDLTLVARVRGTDWLYTYLRSFYTDPSRPFGVNNIVFPSVGMPHVLEELQGTP
EPIFETKVVDGNEVQHVVGVKSRGNGELSEGEYNQAVRDLVNFLEYSGEPMKLERQNLGWWTMGFLVIFTIVVVALKKEY
WRDVH

Sequences:

>Translated_245_residues
MKKWIVVLFAMLPSLAMAAGANVHLDKANNDLTDQASLQNGAKLFMNYCFGCHSTQYQRYERVANDLGIPADLMKENLIF
DPETKIGQLMENAIPDKSAAKWFGAPPPDLTLVARVRGTDWLYTYLRSFYTDPSRPFGVNNIVFPSVGMPHVLEELQGTP
EPIFETKVVDGNEVQHVVGVKSRGNGELSEGEYNQAVRDLVNFLEYSGEPMKLERQNLGWWTMGFLVIFTIVVVALKKEY
WRDVH
>Mature_245_residues
MKKWIVVLFAMLPSLAMAAGANVHLDKANNDLTDQASLQNGAKLFMNYCFGCHSTQYQRYERVANDLGIPADLMKENLIF
DPETKIGQLMENAIPDKSAAKWFGAPPPDLTLVARVRGTDWLYTYLRSFYTDPSRPFGVNNIVFPSVGMPHVLEELQGTP
EPIFETKVVDGNEVQHVVGVKSRGNGELSEGEYNQAVRDLVNFLEYSGEPMKLERQNLGWWTMGFLVIFTIVVVALKKEY
WRDVH

Specific function: Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis. c1 functions as an electron donor to cytochrome c [H]

COG id: COG2857

COG function: function code C; Cytochrome c1

Gene ontology:

Cell location: Cell membrane; Single-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002326
- InterPro:   IPR021157
- InterPro:   IPR009056 [H]

Pfam domain/function: PF02167 Cytochrom_C1 [H]

EC number: 1.10.2.2

Molecular weight: Translated: 27690; Mature: 27690

Theoretical pI: Translated: 5.34; Mature: 5.34

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
3.7 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
3.7 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKWIVVLFAMLPSLAMAAGANVHLDKANNDLTDQASLQNGAKLFMNYCFGCHSTQYQRY
CCHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHH
ERVANDLGIPADLMKENLIFDPETKIGQLMENAIPDKSAAKWFGAPPPDLTLVARVRGTD
HHHHHHCCCCHHHHHCCCCCCCCHHHHHHHHHHCCCCHHHHCCCCCCCCCEEEEEECCCH
WLYTYLRSFYTDPSRPFGVNNIVFPSVGMPHVLEELQGTPEPIFETKVVDGNEVQHVVGV
HHHHHHHHHHCCCCCCCCCCCEECCCCCCHHHHHHHCCCCCCCCEEECCCCCCHHHHHCC
KSRGNGELSEGEYNQAVRDLVNFLEYSGEPMKLERQNLGWWTMGFLVIFTIVVVALKKEY
CCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCEEHHCCCCHHHHHHHHHHHHHHHHHHHHH
WRDVH
HCCCC
>Mature Secondary Structure
MKKWIVVLFAMLPSLAMAAGANVHLDKANNDLTDQASLQNGAKLFMNYCFGCHSTQYQRY
CCHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHH
ERVANDLGIPADLMKENLIFDPETKIGQLMENAIPDKSAAKWFGAPPPDLTLVARVRGTD
HHHHHHCCCCHHHHHCCCCCCCCHHHHHHHHHHCCCCHHHHCCCCCCCCCEEEEEECCCH
WLYTYLRSFYTDPSRPFGVNNIVFPSVGMPHVLEELQGTPEPIFETKVVDGNEVQHVVGV
HHHHHHHHHHCCCCCCCCCCCEECCCCCCHHHHHHHCCCCCCCCEEECCCCCCHHHHHCC
KSRGNGELSEGEYNQAVRDLVNFLEYSGEPMKLERQNLGWWTMGFLVIFTIVVVALKKEY
CCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCEEHHCCCCHHHHHHHHHHHHHHHHHHHHH
WRDVH
HCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: QH2; ferricytochrome c

Specific reaction: QH2 + 2 ferricytochrome c = Q + 2 ferrocytochrome c

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA