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The map label for this gene is recO

Identifier: 147673381

GI number: 147673381

Start: 2194916

End: 2195641

Strand: Reverse

Name: recO

Synonym: VC0395_A2037

Alternate gene names: 147673381

Gene position: 2195641-2194916 (Counterclockwise)

Preceding gene: 147674346

Following gene: 147675577

Centisome position: 72.61

GC content: 49.59

Gene sequence:

>726_bases
ATGTCAGACGGACTGCAACGCTGTTTTGTTCTGCACCGCCGCCCTTACAGTGAATCGAGCTTAATTCTCGATGTGTTCAG
TGAGGAGTACGGTCGAGTCACATTAATGGCCAAAGGTGCGCGCGGAAAACGCTCCAACCTCAAAGGTGCGCTACAACCTT
TCACTCCTTTACTGCTGAAATGGTCGGGCAATGGCTCGATGAAAACCTTACGCCAAGCCGAACCAATTAGTCTCGGTTTA
CCGCTTTCTGGCGTCTATCTCTATTCTGCTATGTACATCAACGAGCTGGTGGATCGGGTGTTAATGCCAGAAGTCGCTAG
TCCTGGGCTATTTCATGATTATCTGTTTGCGCTCACTGAACTGGCGCAAAGCACCAATCCAGAGCCAGCGCTACGCCGCT
TTGAACTCGCTTTGCTTGCTGCGATGGGCTACGGCGTCGATTTTCTGCATTGTGCGGGAACGGGCGAGCCAGTTTCACCT
GACATGACTTACCGTTATCGTGAACAAAAGGGCTTTATCGCTTCGGTACGTCGCGATAATCTCACTTTTCTTGGTAATGA
GTTGATTGCGATCAGCGAGCGGCGTTTTACCAGCAAAGAACAACTGCAAGCGGCAAAACGCTTTACACGTTTAGCCTTAA
AGCCGTATCTTGGCGGCAAACCTTTAAAGAGTCGTGAGTTGTTTCGTCAAACAACTCTACCTAGAGCACGGAGTACAGAA
GAATGA

Upstream 100 bases:

>100_bases
GCGTTCACTCGGCTATATCGACGATCTCTAAACACGAGAGGTGGCAACGGTGTTGCCACCTTTTTCATTTCTACCTTCAA
CTGCATGATAGAAAGGGAAA

Downstream 100 bases:

>100_bases
GCTCAATTTATCTTGGTGTGAATATCGATCACGTGGCGACTTTGCGTAACGCACGCGGCACACAATATCCCGATCCAGTG
CATGCAGCGGAAATTGCTGA

Product: DNA repair protein RecO

Products: NA

Alternate protein names: Recombination protein O

Number of amino acids: Translated: 241; Mature: 240

Protein sequence:

>241_residues
MSDGLQRCFVLHRRPYSESSLILDVFSEEYGRVTLMAKGARGKRSNLKGALQPFTPLLLKWSGNGSMKTLRQAEPISLGL
PLSGVYLYSAMYINELVDRVLMPEVASPGLFHDYLFALTELAQSTNPEPALRRFELALLAAMGYGVDFLHCAGTGEPVSP
DMTYRYREQKGFIASVRRDNLTFLGNELIAISERRFTSKEQLQAAKRFTRLALKPYLGGKPLKSRELFRQTTLPRARSTE
E

Sequences:

>Translated_241_residues
MSDGLQRCFVLHRRPYSESSLILDVFSEEYGRVTLMAKGARGKRSNLKGALQPFTPLLLKWSGNGSMKTLRQAEPISLGL
PLSGVYLYSAMYINELVDRVLMPEVASPGLFHDYLFALTELAQSTNPEPALRRFELALLAAMGYGVDFLHCAGTGEPVSP
DMTYRYREQKGFIASVRRDNLTFLGNELIAISERRFTSKEQLQAAKRFTRLALKPYLGGKPLKSRELFRQTTLPRARSTE
E
>Mature_240_residues
SDGLQRCFVLHRRPYSESSLILDVFSEEYGRVTLMAKGARGKRSNLKGALQPFTPLLLKWSGNGSMKTLRQAEPISLGLP
LSGVYLYSAMYINELVDRVLMPEVASPGLFHDYLFALTELAQSTNPEPALRRFELALLAAMGYGVDFLHCAGTGEPVSPD
MTYRYREQKGFIASVRRDNLTFLGNELIAISERRFTSKEQLQAAKRFTRLALKPYLGGKPLKSRELFRQTTLPRARSTEE

Specific function: Involved in DNA repair and recF pathway recombination

COG id: COG1381

COG function: function code L; Recombinational DNA repair protein (RecF pathway)

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the recO family

Homologues:

Organism=Escherichia coli, GI2367140, Length=229, Percent_Identity=67.6855895196507, Blast_Score=306, Evalue=9e-85,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): RECO_VIBC3 (A5F5H6)

Other databases:

- EMBL:   CP000627
- EMBL:   CP001235
- ProteinModelPortal:   A5F5H6
- STRING:   A5F5H6
- GenomeReviews:   CP000627_GR
- GenomeReviews:   CP001235_GR
- KEGG:   vco:VC0395_A2037
- eggNOG:   COG1381
- HOGENOM:   HBG645116
- OMA:   SILQPFQ
- ProtClustDB:   PRK00085
- BioCyc:   VCHO345073:VC0395_A2037-MONOMER
- HAMAP:   MF_00201
- InterPro:   IPR001164
- InterPro:   IPR022572
- InterPro:   IPR016027
- InterPro:   IPR003717
- TIGRFAMs:   TIGR00613

Pfam domain/function: PF02565 RecO; PF11967 RecO_N; SSF57863 ArfGAP; SSF50249 Nucleic_acid_OB

EC number: NA

Molecular weight: Translated: 27145; Mature: 27014

Theoretical pI: Translated: 10.01; Mature: 10.01

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSDGLQRCFVLHRRPYSESSLILDVFSEEYGRVTLMAKGARGKRSNLKGALQPFTPLLLK
CCCHHHHHHHHHCCCCCCCHHHHEEHHHCCCEEEEEECCCCCCCCCCCCCCCCCCEEEEE
WSGNGSMKTLRQAEPISLGLPLSGVYLYSAMYINELVDRVLMPEVASPGLFHDYLFALTE
ECCCCCHHHHHCCCCCEECCCCHHHHHHHHHHHHHHHHHHHCCHHCCCCHHHHHHHHHHH
LAQSTNPEPALRRFELALLAAMGYGVDFLHCAGTGEPVSPDMTYRYREQKGFIASVRRDN
HHHCCCCCHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCEEEHHHCCCEEHHCCCC
LTFLGNELIAISERRFTSKEQLQAAKRFTRLALKPYLGGKPLKSRELFRQTTLPRARSTE
EEEECCCEEEEHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCCCCCC
E
C
>Mature Secondary Structure 
SDGLQRCFVLHRRPYSESSLILDVFSEEYGRVTLMAKGARGKRSNLKGALQPFTPLLLK
CCHHHHHHHHHCCCCCCCHHHHEEHHHCCCEEEEEECCCCCCCCCCCCCCCCCCEEEEE
WSGNGSMKTLRQAEPISLGLPLSGVYLYSAMYINELVDRVLMPEVASPGLFHDYLFALTE
ECCCCCHHHHHCCCCCEECCCCHHHHHHHHHHHHHHHHHHHCCHHCCCCHHHHHHHHHHH
LAQSTNPEPALRRFELALLAAMGYGVDFLHCAGTGEPVSPDMTYRYREQKGFIASVRRDN
HHHCCCCCHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCEEEHHHCCCEEHHCCCC
LTFLGNELIAISERRFTSKEQLQAAKRFTRLALKPYLGGKPLKSRELFRQTTLPRARSTE
EEEECCCEEEEHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCCCCCC
E
C

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA