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The map label for this gene is yrbA [H]

Identifier: 147673378

GI number: 147673378

Start: 2256824

End: 2257078

Strand: Reverse

Name: yrbA [H]

Synonym: VC0395_A2097

Alternate gene names: 147673378

Gene position: 2257078-2256824 (Counterclockwise)

Preceding gene: 147675756

Following gene: 147674274

Centisome position: 74.64

GC content: 43.92

Gene sequence:

>255_bases
GTGGATAGCGCACAAGTCCAACAAATTTTACAACAAGCTCTTAATCTCGAAGAAATTCATGTCAAAGGAGAGGGCAGCCA
CTACGAAGTGATCGCTGTCGATGCTTGTTTTGCCGATATGAGCCGCGTGAAGAAACAGCAGATGATTTATGCCCCTTTAA
TGGGTTACATCCAACGTAATGATATTCATGCGGTCACAATGAAGACGTTTACCCCACAAGAGTGGGCACGCAATAAGAAG
TTGATGTCCCTTTAA

Upstream 100 bases:

>100_bases
ATGCTCAGCTTCGTGCCAGAACAACTGCGCACACTGTTTCAGTTGAGCAATATTGAACATCTGATGTCTCAACACATAGC
CAAACCAGCAGAGGTGAATT

Downstream 100 bases:

>100_bases
GGTTTTTATGGAAAAGTTTCGAGTTATTGGGTCCACGCAGCCACTCCAAGGCGAAGTGACCATTTCAGGCGCAAAGAATG
CCGCCCTACCGATTTTATTT

Product: BolA family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 84; Mature: 84

Protein sequence:

>84_residues
MDSAQVQQILQQALNLEEIHVKGEGSHYEVIAVDACFADMSRVKKQQMIYAPLMGYIQRNDIHAVTMKTFTPQEWARNKK
LMSL

Sequences:

>Translated_84_residues
MDSAQVQQILQQALNLEEIHVKGEGSHYEVIAVDACFADMSRVKKQQMIYAPLMGYIQRNDIHAVTMKTFTPQEWARNKK
LMSL
>Mature_84_residues
MDSAQVQQILQQALNLEEIHVKGEGSHYEVIAVDACFADMSRVKKQQMIYAPLMGYIQRNDIHAVTMKTFTPQEWARNKK
LMSL

Specific function: Unknown

COG id: COG5007

COG function: function code K; Predicted transcriptional regulator, BolA superfamily

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the bolA/yrbA family [H]

Homologues:

Organism=Escherichia coli, GI87082226, Length=81, Percent_Identity=56.7901234567901, Blast_Score=107, Evalue=2e-25,

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002634 [H]

Pfam domain/function: PF01722 BolA [H]

EC number: NA

Molecular weight: Translated: 9667; Mature: 9667

Theoretical pI: Translated: 7.60; Mature: 7.60

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
7.1 %Met     (Translated Protein)
8.3 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
7.1 %Met     (Mature Protein)
8.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDSAQVQQILQQALNLEEIHVKGEGSHYEVIAVDACFADMSRVKKQQMIYAPLMGYIQRN
CCHHHHHHHHHHHCCCEEEEEECCCCEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHCC
DIHAVTMKTFTPQEWARNKKLMSL
CEEEEEEECCCCHHHHCCCCCCCC
>Mature Secondary Structure
MDSAQVQQILQQALNLEEIHVKGEGSHYEVIAVDACFADMSRVKKQQMIYAPLMGYIQRN
CCHHHHHHHHHHHCCCEEEEEECCCCEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHCC
DIHAVTMKTFTPQEWARNKKLMSL
CEEEEEEECCCCHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12471157 [H]