| Definition | Vibrio cholerae O395 chromosome 2, complete sequence. |
|---|---|
| Accession | NC_009457 |
| Length | 3,024,069 |
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The map label for this gene is tas [H]
Identifier: 147673112
GI number: 147673112
Start: 205374
End: 206432
Strand: Reverse
Name: tas [H]
Synonym: VC0395_A0199
Alternate gene names: 147673112
Gene position: 206432-205374 (Counterclockwise)
Preceding gene: 147673814
Following gene: 147675421
Centisome position: 6.83
GC content: 46.84
Gene sequence:
>1059_bases TTGGCTCTAAGACAAGGAAGTGTTATGCAATATACCAAGCTGCCTCATTCCAGCCTCGAAATCAGCAAGATCTGTTTAGG TACCATGACGTTTGGTGAACAGAATTCGCAAGCTGATGCCTTTCAACAGCTCGATTATGCTCTTGAGCGTGGAGTGAATT TTATCGATACGGCGGAGATGTATCCGGTTCCGCCAACGGCACAAATACAAGGTAAAACCGAAGAGTTTATTGGCAATTGG CTGACTAAATCCGGTAAGCGAGAGAAAATCGTGCTCGCCACCAAAGTCGCTGGTCCACGCAATGTGCCTTACATTCGCGA CAAAATGGCGCTCGATCATCGCAATATCCATCAAGCGGTCGATGATAGCCTACGTCGTCTGCAAACGGATTATATCGACC TGTATCAACTTCACTGGCCGCAGCGCCAAACCAATACTTTCGGTCAGCTCAACTACCCTTATCCAGACAAGCAAGAAGAA GTAACGCTGATTGAAACACTGGAAGCGCTCAATGATTTGGTGCGCATGGGTAAAGTGCGTTATATCGGAGTTTCTAATGA AACGCCGTGGGGAGTGATGAGCTACCTGCGTCTTGCAGAAAAACATGAACTGCCAAGAATTGTCTCGATCCAGAACCCTT ATAATCTGCTCAACCGCAGTTTTGAGGTGGGACTTGCCGAAATAAGTCATCTGGAGGGCGTTAAGCTACTCGCTTACTCG CCACTCGCCTTCGGTGCTTTAAGTGGTAAATATCTCAATGGTGCTCGTCCTGCGGGTGCGCGTTGTACACTGCATCAACG CTTCTCACGCTACTTTACAGAACAAGGCATTCTTGCAACAGAAGCCTATGTCGCATTAGCCCAGCAATTTGGGCTCGATC CTGCGCAAATGGCACTAGCGTTTGTTAATCAGCGCCCATTTGTGGCCTCGAATATTATCGGAGCCACAACGATGGAGCAG TTAAAATCGAATTTGGATAGTTTGGATATTTCATTAAATGCAGAACTTCTGCAAAAAATTCAGGAGATTGGAACCACTTA TTCCAATCCCTGTCCTTAG
Upstream 100 bases:
>100_bases CGACAGCGCAAACCTCTGTGATTTTTCTTATTCCGAATGTAACGAAGTCGCCGCCATCACTCGGCTTCAACTTCCAATAC AAGGGAATATCATTCGTTCT
Downstream 100 bases:
>100_bases TGATGTGGGGGCTGGTGCACAGACCAGCCCCTTAGCATTACGTCGGTATTCGCGCAGCTAGCACTCGGCGAATATGTCTC ACACGGCGTTCCGCGACAAC
Product: aldo/keto reductase family oxidoreductase TAS
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 352; Mature: 351
Protein sequence:
>352_residues MALRQGSVMQYTKLPHSSLEISKICLGTMTFGEQNSQADAFQQLDYALERGVNFIDTAEMYPVPPTAQIQGKTEEFIGNW LTKSGKREKIVLATKVAGPRNVPYIRDKMALDHRNIHQAVDDSLRRLQTDYIDLYQLHWPQRQTNTFGQLNYPYPDKQEE VTLIETLEALNDLVRMGKVRYIGVSNETPWGVMSYLRLAEKHELPRIVSIQNPYNLLNRSFEVGLAEISHLEGVKLLAYS PLAFGALSGKYLNGARPAGARCTLHQRFSRYFTEQGILATEAYVALAQQFGLDPAQMALAFVNQRPFVASNIIGATTMEQ LKSNLDSLDISLNAELLQKIQEIGTTYSNPCP
Sequences:
>Translated_352_residues MALRQGSVMQYTKLPHSSLEISKICLGTMTFGEQNSQADAFQQLDYALERGVNFIDTAEMYPVPPTAQIQGKTEEFIGNW LTKSGKREKIVLATKVAGPRNVPYIRDKMALDHRNIHQAVDDSLRRLQTDYIDLYQLHWPQRQTNTFGQLNYPYPDKQEE VTLIETLEALNDLVRMGKVRYIGVSNETPWGVMSYLRLAEKHELPRIVSIQNPYNLLNRSFEVGLAEISHLEGVKLLAYS PLAFGALSGKYLNGARPAGARCTLHQRFSRYFTEQGILATEAYVALAQQFGLDPAQMALAFVNQRPFVASNIIGATTMEQ LKSNLDSLDISLNAELLQKIQEIGTTYSNPCP >Mature_351_residues ALRQGSVMQYTKLPHSSLEISKICLGTMTFGEQNSQADAFQQLDYALERGVNFIDTAEMYPVPPTAQIQGKTEEFIGNWL TKSGKREKIVLATKVAGPRNVPYIRDKMALDHRNIHQAVDDSLRRLQTDYIDLYQLHWPQRQTNTFGQLNYPYPDKQEEV TLIETLEALNDLVRMGKVRYIGVSNETPWGVMSYLRLAEKHELPRIVSIQNPYNLLNRSFEVGLAEISHLEGVKLLAYSP LAFGALSGKYLNGARPAGARCTLHQRFSRYFTEQGILATEAYVALAQQFGLDPAQMALAFVNQRPFVASNIIGATTMEQL KSNLDSLDISLNAELLQKIQEIGTTYSNPCP
Specific function: Unknown
COG id: COG0667
COG function: function code C; Predicted oxidoreductases (related to aryl-alcohol dehydrogenases)
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the aldo/keto reductase 2 family [H]
Homologues:
Organism=Homo sapiens, GI27436969, Length=356, Percent_Identity=29.7752808988764, Blast_Score=116, Evalue=3e-26, Organism=Homo sapiens, GI27436964, Length=346, Percent_Identity=29.4797687861272, Blast_Score=115, Evalue=7e-26, Organism=Homo sapiens, GI4504825, Length=344, Percent_Identity=29.0697674418605, Blast_Score=114, Evalue=1e-25, Organism=Homo sapiens, GI27436962, Length=351, Percent_Identity=29.3447293447293, Blast_Score=114, Evalue=1e-25, Organism=Homo sapiens, GI27436966, Length=331, Percent_Identity=29.9093655589124, Blast_Score=112, Evalue=5e-25, Organism=Homo sapiens, GI27436971, Length=338, Percent_Identity=28.9940828402367, Blast_Score=102, Evalue=6e-22, Organism=Homo sapiens, GI223718702, Length=347, Percent_Identity=25.0720461095101, Blast_Score=74, Evalue=1e-13, Organism=Homo sapiens, GI41327764, Length=347, Percent_Identity=25.6484149855908, Blast_Score=69, Evalue=7e-12, Organism=Homo sapiens, GI41152114, Length=347, Percent_Identity=25.0720461095101, Blast_Score=69, Evalue=9e-12, Organism=Escherichia coli, GI1789199, Length=346, Percent_Identity=61.849710982659, Blast_Score=452, Evalue=1e-128, Organism=Escherichia coli, GI87081735, Length=361, Percent_Identity=34.0720221606648, Blast_Score=164, Evalue=6e-42, Organism=Escherichia coli, GI1789375, Length=337, Percent_Identity=28.7833827893175, Blast_Score=107, Evalue=1e-24, Organism=Escherichia coli, GI1788070, Length=351, Percent_Identity=28.7749287749288, Blast_Score=98, Evalue=8e-22, Organism=Escherichia coli, GI1788081, Length=315, Percent_Identity=30.1587301587302, Blast_Score=84, Evalue=1e-17, Organism=Caenorhabditis elegans, GI17537077, Length=349, Percent_Identity=26.647564469914, Blast_Score=67, Evalue=1e-11, Organism=Caenorhabditis elegans, GI17537075, Length=356, Percent_Identity=26.4044943820225, Blast_Score=67, Evalue=2e-11, Organism=Saccharomyces cerevisiae, GI6323998, Length=344, Percent_Identity=27.6162790697674, Blast_Score=117, Evalue=2e-27, Organism=Saccharomyces cerevisiae, GI6319958, Length=314, Percent_Identity=27.7070063694268, Blast_Score=113, Evalue=5e-26, Organism=Saccharomyces cerevisiae, GI6319951, Length=343, Percent_Identity=26.2390670553936, Blast_Score=100, Evalue=3e-22, Organism=Saccharomyces cerevisiae, GI6322615, Length=236, Percent_Identity=27.1186440677966, Blast_Score=90, Evalue=5e-19, Organism=Saccharomyces cerevisiae, GI6325169, Length=264, Percent_Identity=28.030303030303, Blast_Score=85, Evalue=2e-17, Organism=Saccharomyces cerevisiae, GI6321052, Length=139, Percent_Identity=33.8129496402878, Blast_Score=75, Evalue=1e-14, Organism=Saccharomyces cerevisiae, GI6324694, Length=182, Percent_Identity=29.6703296703297, Blast_Score=69, Evalue=2e-12, Organism=Drosophila melanogaster, GI45553081, Length=329, Percent_Identity=27.0516717325228, Blast_Score=76, Evalue=4e-14, Organism=Drosophila melanogaster, GI24646159, Length=348, Percent_Identity=27.0114942528736, Blast_Score=72, Evalue=6e-13, Organism=Drosophila melanogaster, GI24646155, Length=341, Percent_Identity=25.2199413489736, Blast_Score=69, Evalue=5e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001395 - InterPro: IPR020471 - InterPro: IPR023210 [H]
Pfam domain/function: PF00248 Aldo_ket_red [H]
EC number: NA
Molecular weight: Translated: 39620; Mature: 39489
Theoretical pI: Translated: 6.88; Mature: 6.88
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MALRQGSVMQYTKLPHSSLEISKICLGTMTFGEQNSQADAFQQLDYALERGVNFIDTAEM CCCCCCCCHHHHCCCCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCEEECCCC YPVPPTAQIQGKTEEFIGNWLTKSGKREKIVLATKVAGPRNVPYIRDKMALDHRNIHQAV CCCCCCCCCCCCHHHHHHHHHHCCCCCCEEEEEEECCCCCCCCCHHHHHHHHHHHHHHHH DDSLRRLQTDYIDLYQLHWPQRQTNTFGQLNYPYPDKQEEVTLIETLEALNDLVRMGKVR HHHHHHHHHHHHHHHHHCCCCHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCEE YIGVSNETPWGVMSYLRLAEKHELPRIVSIQNPYNLLNRSFEVGLAEISHLEGVKLLAYS EEECCCCCCHHHHHHHHHHHHHCCCCEEEECCCHHHHHHHHHHHHHHHHHCCCCEEEEEC PLAFGALSGKYLNGARPAGARCTLHQRFSRYFTEQGILATEAYVALAQQFGLDPAQMALA CHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCHHHHHHH FVNQRPFVASNIIGATTMEQLKSNLDSLDISLNAELLQKIQEIGTTYSNPCP HHCCCCCHHHHHHHHHHHHHHHHCCCCEEEEECHHHHHHHHHHCCCCCCCCC >Mature Secondary Structure ALRQGSVMQYTKLPHSSLEISKICLGTMTFGEQNSQADAFQQLDYALERGVNFIDTAEM CCCCCCCHHHHCCCCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCEEECCCC YPVPPTAQIQGKTEEFIGNWLTKSGKREKIVLATKVAGPRNVPYIRDKMALDHRNIHQAV CCCCCCCCCCCCHHHHHHHHHHCCCCCCEEEEEEECCCCCCCCCHHHHHHHHHHHHHHHH DDSLRRLQTDYIDLYQLHWPQRQTNTFGQLNYPYPDKQEEVTLIETLEALNDLVRMGKVR HHHHHHHHHHHHHHHHHCCCCHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCEE YIGVSNETPWGVMSYLRLAEKHELPRIVSIQNPYNLLNRSFEVGLAEISHLEGVKLLAYS EEECCCCCCHHHHHHHHHHHHHCCCCEEEECCCHHHHHHHHHHHHHHHHHCCCCEEEEEC PLAFGALSGKYLNGARPAGARCTLHQRFSRYFTEQGILATEAYVALAQQFGLDPAQMALA CHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCHHHHHHH FVNQRPFVASNIIGATTMEQLKSNLDSLDISLNAELLQKIQEIGTTYSNPCP HHCCCCCHHHHHHHHHHHHHHHHCCCCEEEEECHHHHHHHHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9560382; 9278503 [H]