| Definition | Bradyrhizobium sp. ORS278 chromosome, complete genome. |
|---|---|
| Accession | NC_009445 |
| Length | 7,456,587 |
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The map label for this gene is asmA [C]
Identifier: 146343725
GI number: 146343725
Start: 7260229
End: 7262328
Strand: Reverse
Name: asmA [C]
Synonym: BRADO6972
Alternate gene names: 146343725
Gene position: 7262328-7260229 (Counterclockwise)
Preceding gene: 146343728
Following gene: 146343724
Centisome position: 97.39
GC content: 69.24
Gene sequence:
>2100_bases ATGAAAGCATTGAAGATTGCAGGCGGTTTGCTCGGCGCCGTCATCGTCGTGCTCGCGCTGGCGCTGGCCTTCGGGCTGCC CGCGAGCTTCCTGACCGTGGCGATCCAGGACCGCGTGGAGCGCGACACCGGCTATCGCCTGAGCATCGCGGGGGGCGCCA CGGTCAGCCTGTGGCCCTCCCTGCAGGTCACGCTGACCGACATCACGCTGCAGGACCCGAAAGACCGCGACGGCAACAAC CGGCTGACGGTGTCCAGGCTGCAGGCCGACATGGCGCTGTCGAGCCTGTGGTCCGGCCGGCCCGACATCAGCGAGATCAG CATCGAGAAGCCGACCCTCTACCTTCCCCTGCTGCGCGAGCGGCTGCGGGACAATGCGCCGCGCAGCCGCTCGTCTGCGA AGCCGGAGAGCGTCCCAGCGGTCCGGATCGCCAGCGTCACCGTCACGGACGGCGCCGTGATCCTCTCCAACCCGCGCGAC CGCGTCGAAAACCGGCTCGAGGGCCTCAGTGCGACGGGCTCGCTGAGCGGCGACAAGATCAAGATCAAAGGCAGCGCCCG CGCCGGCGATCGTCCGGTGACGTTCGAGATCAATGCGGCCGCGCCGGCGATGCCGATCGATCGCCAGACGCTGCCGGTGG ATTTCAGGATCGGCATGGAGAGCGCGTTCCGCGGCGTCCTCGCCGGGCGTGCCGATGTCAGGCTCAATGGCGCGCTGATC ATGATCAACGGTCTCAGCGGCACGCTGGGCGATGGCGATTTCAACGGCTGGGCCTCGGTCGACCTCGCCAGCAAGCCGCT GGTGAAGATCGACTTGGACGTGCGCCGCCTGGATCTTCCGGACTCTGCCGCGCCAGCCTCGTCGCGCGCCGCGGGGTGGA GCACGGCGGCCATCGACCTGCGCGGCCTGAACTATCTCGACGCGCGCGTGAAGCTGTCGGCGACGGATATCGGCGTCTCC GGCGCGCGCCTCGGCCCGCTGGATATGGAGGCCTCGCTGGCCGGCGGCCTGCTGAAGGCCACCGTCATCAATCTCGGCGT CTACGACGGCCAGGCCGCCGGCGAGGCCGTGATCGATGCCTCGACCGGCAATCCAGCCTACGCGATGCACGGCGATATCG TCGGCGTGCGGGCGCTGCCGCTGCTGCAAAACCTCGCCGGCTTCGACAAACTCGATGCGCGCATGCAGGGCAAGCTGGCG CTGCGCTCGAGCGGCGCCAGCCAGCAGGCGATCATGAACAATCTGAGCGGCTCGACCTTCCTGCTGTTTCAGGACGGCGT GATCCGCGGCATCAACGTCGCGCAGATGATCCGCTCGCTGACGACCAATCCGCTTTCGGGCTGGCAGGATTCGAAGGAGT TGACCACCGACCTCACGCAGCTCTCGGCCTCATTCCAGATCGAGCGCGGCCAGGCGGCGACGACGGACCTCAATCTGGTC GGACCGCTGGTCAAGGTCACCGGCGCCGGCACGGTCGATCTCGGCAATCGCGCGCTGGCGATGCGGGTCGAGCCGAAGCT CGTGATGACGACCGAAGGGCAGGGCCGGACCTCCAACCCGGTCGGCCTCGGCATACCCGTGGTGATCGACGGCCCCTGGA GCCAGCCGCGCTTCTATCCCGACATGGCCGGTATCCTCGACGATCCCGAGGGCACCTATGCCAAGCTCAAGCAGATGGGG CAGGGGCTGTTCGGCAAGGATGGCGCAGGCCTCAACAACCTGCTCAACGGCATCGGCGGCCTGATCGGAAACGCGGCGCC AAGCACCGGTCCAGTCCCGAACGCACCGACAGCGGCGCCGAATGCGCAGGCGCCGGCCGCCGGCCAGTCCGACCTGCTCG GCGGCCAGCTTGGGGCCACCATCGGCAATCTGATCCAGCAGGGCCTGCAACAGGCCGCCCCGCCGCAGCCGAGGAGCCGC GGCCGCACCGTGGTCCCGCCGGCCGGCATCGCGGCTGCGCCGCAGGCCGACCAACCTCCGCCGGCCGCCCCGGCCGACGC CGGCCAGGGGGGCGCAACCGGCGAAGCGCCGGCCGGCGCGGACAGCGTCCCCGATAGCCAGCCCATGAACGACGTGCTGA AGCGGATCTTCAATCGGTAA
Upstream 100 bases:
>100_bases GGGCGATCTTCGTTCCGGGAAAAATTGAGATTGAACCGGGTCGGCGTTGCCGCATGCTAACCCGTGGAGACCGCTCGCCC GCAGCGCTTGGGACATCGAT
Downstream 100 bases:
>100_bases CATGAGGCAGGTGACGGTATTTCTGCGCCGTCCTCCTTCAAATGAGGGAGGAGATTGGTCACTGTTTGCGTCATCTTTGC GCTTCGGGGGTCAGCGCATC
Product: putative AsmA-like protein
Products: NA
Alternate protein names: AsmA Protein; AsmA Family; AsmA-Like Protein; AsmA Protein Assembly Of Outer Membrane Proteins; Outer Membrane Protein Assembly Protein AsmA; Protein Involved In Assembly Of Outer Membrane Proteins; Protein Involved In Outer Membrane Biogenesis; Assembly Protein; Outer Membrane Assembly Protein; Periplasmic Protein; Secreted Protein
Number of amino acids: Translated: 699; Mature: 699
Protein sequence:
>699_residues MKALKIAGGLLGAVIVVLALALAFGLPASFLTVAIQDRVERDTGYRLSIAGGATVSLWPSLQVTLTDITLQDPKDRDGNN RLTVSRLQADMALSSLWSGRPDISEISIEKPTLYLPLLRERLRDNAPRSRSSAKPESVPAVRIASVTVTDGAVILSNPRD RVENRLEGLSATGSLSGDKIKIKGSARAGDRPVTFEINAAAPAMPIDRQTLPVDFRIGMESAFRGVLAGRADVRLNGALI MINGLSGTLGDGDFNGWASVDLASKPLVKIDLDVRRLDLPDSAAPASSRAAGWSTAAIDLRGLNYLDARVKLSATDIGVS GARLGPLDMEASLAGGLLKATVINLGVYDGQAAGEAVIDASTGNPAYAMHGDIVGVRALPLLQNLAGFDKLDARMQGKLA LRSSGASQQAIMNNLSGSTFLLFQDGVIRGINVAQMIRSLTTNPLSGWQDSKELTTDLTQLSASFQIERGQAATTDLNLV GPLVKVTGAGTVDLGNRALAMRVEPKLVMTTEGQGRTSNPVGLGIPVVIDGPWSQPRFYPDMAGILDDPEGTYAKLKQMG QGLFGKDGAGLNNLLNGIGGLIGNAAPSTGPVPNAPTAAPNAQAPAAGQSDLLGGQLGATIGNLIQQGLQQAAPPQPRSR GRTVVPPAGIAAAPQADQPPPAAPADAGQGGATGEAPAGADSVPDSQPMNDVLKRIFNR
Sequences:
>Translated_699_residues MKALKIAGGLLGAVIVVLALALAFGLPASFLTVAIQDRVERDTGYRLSIAGGATVSLWPSLQVTLTDITLQDPKDRDGNN RLTVSRLQADMALSSLWSGRPDISEISIEKPTLYLPLLRERLRDNAPRSRSSAKPESVPAVRIASVTVTDGAVILSNPRD RVENRLEGLSATGSLSGDKIKIKGSARAGDRPVTFEINAAAPAMPIDRQTLPVDFRIGMESAFRGVLAGRADVRLNGALI MINGLSGTLGDGDFNGWASVDLASKPLVKIDLDVRRLDLPDSAAPASSRAAGWSTAAIDLRGLNYLDARVKLSATDIGVS GARLGPLDMEASLAGGLLKATVINLGVYDGQAAGEAVIDASTGNPAYAMHGDIVGVRALPLLQNLAGFDKLDARMQGKLA LRSSGASQQAIMNNLSGSTFLLFQDGVIRGINVAQMIRSLTTNPLSGWQDSKELTTDLTQLSASFQIERGQAATTDLNLV GPLVKVTGAGTVDLGNRALAMRVEPKLVMTTEGQGRTSNPVGLGIPVVIDGPWSQPRFYPDMAGILDDPEGTYAKLKQMG QGLFGKDGAGLNNLLNGIGGLIGNAAPSTGPVPNAPTAAPNAQAPAAGQSDLLGGQLGATIGNLIQQGLQQAAPPQPRSR GRTVVPPAGIAAAPQADQPPPAAPADAGQGGATGEAPAGADSVPDSQPMNDVLKRIFNR >Mature_699_residues MKALKIAGGLLGAVIVVLALALAFGLPASFLTVAIQDRVERDTGYRLSIAGGATVSLWPSLQVTLTDITLQDPKDRDGNN RLTVSRLQADMALSSLWSGRPDISEISIEKPTLYLPLLRERLRDNAPRSRSSAKPESVPAVRIASVTVTDGAVILSNPRD RVENRLEGLSATGSLSGDKIKIKGSARAGDRPVTFEINAAAPAMPIDRQTLPVDFRIGMESAFRGVLAGRADVRLNGALI MINGLSGTLGDGDFNGWASVDLASKPLVKIDLDVRRLDLPDSAAPASSRAAGWSTAAIDLRGLNYLDARVKLSATDIGVS GARLGPLDMEASLAGGLLKATVINLGVYDGQAAGEAVIDASTGNPAYAMHGDIVGVRALPLLQNLAGFDKLDARMQGKLA LRSSGASQQAIMNNLSGSTFLLFQDGVIRGINVAQMIRSLTTNPLSGWQDSKELTTDLTQLSASFQIERGQAATTDLNLV GPLVKVTGAGTVDLGNRALAMRVEPKLVMTTEGQGRTSNPVGLGIPVVIDGPWSQPRFYPDMAGILDDPEGTYAKLKQMG QGLFGKDGAGLNNLLNGIGGLIGNAAPSTGPVPNAPTAAPNAQAPAAGQSDLLGGQLGATIGNLIQQGLQQAAPPQPRSR GRTVVPPAGIAAAPQADQPPPAAPADAGQGGATGEAPAGADSVPDSQPMNDVLKRIFNR
Specific function: Involved In The Inhibition Of Assembly Of Mutant Ompf Proteins. In General, Could Be Involved In The Assembly Of Outer Membrane Proteins. [C]
COG id: COG2982
COG function: function code M; Uncharacterized protein involved in outer membrane biogenesis
Gene ontology:
Cell location: Periplasmic Protein [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 72390; Mature: 72390
Theoretical pI: Translated: 7.52; Mature: 7.52
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKALKIAGGLLGAVIVVLALALAFGLPASFLTVAIQDRVERDTGYRLSIAGGATVSLWPS CCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCEEEECCCCEEEECCC LQVTLTDITLQDPKDRDGNNRLTVSRLQADMALSSLWSGRPDISEISIEKPTLYLPLLRE EEEEEEEEEEECCCCCCCCCCEEHHHHHHHHHHHHHHCCCCCCCCEECCCCEEEHHHHHH RLRDNAPRSRSSAKPESVPAVRIASVTVTDGAVILSNPRDRVENRLEGLSATGSLSGDKI HHHCCCCCCCCCCCCCCCCEEEEEEEEEECCEEEECCCHHHHHHHHHCCCCCCCCCCCEE KIKGSARAGDRPVTFEINAAAPAMPIDRQTLPVDFRIGMESAFRGVLAGRADVRLNGALI EEEECCCCCCCCEEEEECCCCCCCCCCCCCCCEEEECCHHHHHHHHHCCCCCEEECCEEE MINGLSGTLGDGDFNGWASVDLASKPLVKIDLDVRRLDLPDSAAPASSRAAGWSTAAIDL EEECCCCCCCCCCCCCEEEEEECCCCEEEEECCEEEECCCCCCCCCCCCCCCCEEEEEEE RGLNYLDARVKLSATDIGVSGARLGPLDMEASLAGGLLKATVINLGVYDGQAAGEAVIDA CCCCEECCEEEEEEEECCCCCCCCCCCCCHHHHHCCHHEEEEEEEECCCCCCCCCEEEEC STGNPAYAMHGDIVGVRALPLLQNLAGFDKLDARMQGKLALRSSGASQQAIMNNLSGSTF CCCCCCEEECCCEEEHHHHHHHHHHCCCHHHHHHHHCEEEEECCCCHHHHHHHCCCCCEE LLFQDGVIRGINVAQMIRSLTTNPLSGWQDSKELTTDLTQLSASFQIERGQAATTDLNLV EEEECCCCCCCCHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHEEEECCCCCCCCHHHH GPLVKVTGAGTVDLGNRALAMRVEPKLVMTTEGQGRTSNPVGLGIPVVIDGPWSQPRFYP CCEEEECCCCEEECCCCEEEEEECCEEEEEECCCCCCCCCCCCCCEEEEECCCCCCCCCC DMAGILDDPEGTYAKLKQMGQGLFGKDGAGLNNLLNGIGGLIGNAAPSTGPVPNAPTAAP CHHCCCCCCCCHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCC NAQAPAAGQSDLLGGQLGATIGNLIQQGLQQAAPPQPRSRGRTVVPPAGIAAAPQADQPP CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCHHHCCCEECCCCCCCCCCCCCCCC PAAPADAGQGGATGEAPAGADSVPDSQPMNDVLKRIFNR CCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCC >Mature Secondary Structure MKALKIAGGLLGAVIVVLALALAFGLPASFLTVAIQDRVERDTGYRLSIAGGATVSLWPS CCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCEEEECCCCEEEECCC LQVTLTDITLQDPKDRDGNNRLTVSRLQADMALSSLWSGRPDISEISIEKPTLYLPLLRE EEEEEEEEEEECCCCCCCCCCEEHHHHHHHHHHHHHHCCCCCCCCEECCCCEEEHHHHHH RLRDNAPRSRSSAKPESVPAVRIASVTVTDGAVILSNPRDRVENRLEGLSATGSLSGDKI HHHCCCCCCCCCCCCCCCCEEEEEEEEEECCEEEECCCHHHHHHHHHCCCCCCCCCCCEE KIKGSARAGDRPVTFEINAAAPAMPIDRQTLPVDFRIGMESAFRGVLAGRADVRLNGALI EEEECCCCCCCCEEEEECCCCCCCCCCCCCCCEEEECCHHHHHHHHHCCCCCEEECCEEE MINGLSGTLGDGDFNGWASVDLASKPLVKIDLDVRRLDLPDSAAPASSRAAGWSTAAIDL EEECCCCCCCCCCCCCEEEEEECCCCEEEEECCEEEECCCCCCCCCCCCCCCCEEEEEEE RGLNYLDARVKLSATDIGVSGARLGPLDMEASLAGGLLKATVINLGVYDGQAAGEAVIDA CCCCEECCEEEEEEEECCCCCCCCCCCCCHHHHHCCHHEEEEEEEECCCCCCCCCEEEEC STGNPAYAMHGDIVGVRALPLLQNLAGFDKLDARMQGKLALRSSGASQQAIMNNLSGSTF CCCCCCEEECCCEEEHHHHHHHHHHCCCHHHHHHHHCEEEEECCCCHHHHHHHCCCCCEE LLFQDGVIRGINVAQMIRSLTTNPLSGWQDSKELTTDLTQLSASFQIERGQAATTDLNLV EEEECCCCCCCCHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHEEEECCCCCCCCHHHH GPLVKVTGAGTVDLGNRALAMRVEPKLVMTTEGQGRTSNPVGLGIPVVIDGPWSQPRFYP CCEEEECCCCEEECCCCEEEEEECCEEEEEECCCCCCCCCCCCCCEEEEECCCCCCCCCC DMAGILDDPEGTYAKLKQMGQGLFGKDGAGLNNLLNGIGGLIGNAAPSTGPVPNAPTAAP CHHCCCCCCCCHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCC NAQAPAAGQSDLLGGQLGATIGNLIQQGLQQAAPPQPRSRGRTVVPPAGIAAAPQADQPP CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCHHHCCCEECCCCCCCCCCCCCCCC PAAPADAGQGGATGEAPAGADSVPDSQPMNDVLKRIFNR CCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA