| Definition | Bradyrhizobium sp. ORS278 chromosome, complete genome. |
|---|---|
| Accession | NC_009445 |
| Length | 7,456,587 |
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The map label for this gene is 146343720
Identifier: 146343720
GI number: 146343720
Start: 7253023
End: 7253979
Strand: Reverse
Name: 146343720
Synonym: BRADO6967
Alternate gene names: NA
Gene position: 7253979-7253023 (Counterclockwise)
Preceding gene: 146343721
Following gene: 146343719
Centisome position: 97.28
GC content: 65.41
Gene sequence:
>957_bases ATGGCGAAGGGTTTCGCATCCACCACCGACATGGCCGAGAAGAAGGTCACCTTCTCCGAGATCGGCCCCGATCTCTATGC GTTCACCGCGGAGGGCGATCCGAACTCTGCTGTCATCGTCGGCGACGACGGCTGCATCGTGTTCGACGCGCAGGCGACGC CGGCGATGGCCGGCAAGGTGATCGAGCGGGTCAGGACCGTCACCGACAAGCCGATCAAATATGTCGTGCTGTCGCATTAT CATGCCGTGCGCGTGCTCGGCGCCTCGGCCTATCAGGCGCAAGGCATCGTCGCTTCGCAGGAGACGCACCGGCTGATCGT CGAGCGCGGCCAGCAGGATTGGGACTCCGAGTATGGCCGCTTCCCGCGGCTGTTTCAGGACGCGCAGAGCATTCCCGGCC TGACCTGGCCGACGCTGACCTTCGAAGGCGAGATGACGATCCATCTCGGCAAGCGCGAGGTGCAATTGATCCAGCTCGGC GCTGGCCACACCTCCGGCGACATCGTCGCCTGGGTGCCGGACGCCGAGGTGATGTTCTCCGGCGACCTCATCGAGTACCA CTCGGCCTGCTATTGCGGCGACGCCTATTTGCGCGAATGGCCGTCGACCCTCAACGAGATTCGCGACTTCAATCCCAAGG CGATCGCGCCCGGCCGCGGCGACGCGCTGAAGGGCGAGGCCACCGTGCGCGAGGCGATCGCCATGACGCGCGACTTCGTC TCGTCGCTGTATGGCGCCGCCGAGCTGTCGGTGGCCAGGGGACGTAGCCTCAAGGAGTCGATGGCGGCGACCCGCGAGGT CATGGACCCGAAGTTCTCGAGCTTCGCGATCTACGAGCACTGTCTGCCGTTCAACGTGTCCCGCGCCTATGACGAAGCCA GCGGCATCGACGATCCCGTGATCTGGACCGCCGAGCGCGACCGCGAGATGTGGGCCCGCCTGCAGGGAGAAGGATGA
Upstream 100 bases:
>100_bases GTTGCGCGAGGCGATCACGCTCGCCAAGCGGCGCATGATCGATGCCAGCCAGCAACAGCAACAACAGCAGCAATAGCTGC CCGACACGAGGAATGAACTG
Downstream 100 bases:
>100_bases TGAACATCAACACATCGCCTGACCGGCTAAGCCGTGCGACTGGGCAGGTCACGCCCGGCTACATGTCCGGCTTCGGCAAT TCGTTCGAGACCGAGGCGCT
Product: putative metallo-beta-lactamase family protein
Products: NA
Alternate protein names: Beta-Lactamase Domain Protein; Metallo-Beta-Lactamase Family Protein; Beta-Lactamase-Like; Beta Lactamase; Cyclase; Beta-Lactamase-Like Protein; Beta-Lactamase; Metallo-Beta-Lactamase Superfamily Protein; Beta-Lactamase Class B; Metallo-Beta-Lactamase; Zn-Dependent Hydrolase; Hydrolase; Dehydrase; Metallo-Beta-Lactamase Superfamily; Alkyl Sulfatase Or Beta-Lactamase; Secreted Hydrolase; Beta Lactamase SoxH-Like Protein; Zn-Dependent Hydrolase Glyoxylase; Zinc-Dependent Hydrolase; Glyoxylase-Like Zinc-Dependent Hydrolase; SoxH Protein-Like; Metallo-Beta-Lactamase Domain-Containing Protein; Zn-Dependent Hydrolase Family Protein; Metallo-Beta-Lactamase Domain Protein; Zn-Dependent Hydrolase Glyoxylase Family Protein; Cyclase/Dehydrase; Bifunctional HHDD Isomerase/Cyclase/Dehydrase; Beta-Lactamase Domain Containing Protein; Rhodanese Domain Protein
Number of amino acids: Translated: 318; Mature: 317
Protein sequence:
>318_residues MAKGFASTTDMAEKKVTFSEIGPDLYAFTAEGDPNSAVIVGDDGCIVFDAQATPAMAGKVIERVRTVTDKPIKYVVLSHY HAVRVLGASAYQAQGIVASQETHRLIVERGQQDWDSEYGRFPRLFQDAQSIPGLTWPTLTFEGEMTIHLGKREVQLIQLG AGHTSGDIVAWVPDAEVMFSGDLIEYHSACYCGDAYLREWPSTLNEIRDFNPKAIAPGRGDALKGEATVREAIAMTRDFV SSLYGAAELSVARGRSLKESMAATREVMDPKFSSFAIYEHCLPFNVSRAYDEASGIDDPVIWTAERDREMWARLQGEG
Sequences:
>Translated_318_residues MAKGFASTTDMAEKKVTFSEIGPDLYAFTAEGDPNSAVIVGDDGCIVFDAQATPAMAGKVIERVRTVTDKPIKYVVLSHY HAVRVLGASAYQAQGIVASQETHRLIVERGQQDWDSEYGRFPRLFQDAQSIPGLTWPTLTFEGEMTIHLGKREVQLIQLG AGHTSGDIVAWVPDAEVMFSGDLIEYHSACYCGDAYLREWPSTLNEIRDFNPKAIAPGRGDALKGEATVREAIAMTRDFV SSLYGAAELSVARGRSLKESMAATREVMDPKFSSFAIYEHCLPFNVSRAYDEASGIDDPVIWTAERDREMWARLQGEG >Mature_317_residues AKGFASTTDMAEKKVTFSEIGPDLYAFTAEGDPNSAVIVGDDGCIVFDAQATPAMAGKVIERVRTVTDKPIKYVVLSHYH AVRVLGASAYQAQGIVASQETHRLIVERGQQDWDSEYGRFPRLFQDAQSIPGLTWPTLTFEGEMTIHLGKREVQLIQLGA GHTSGDIVAWVPDAEVMFSGDLIEYHSACYCGDAYLREWPSTLNEIRDFNPKAIAPGRGDALKGEATVREAIAMTRDFVS SLYGAAELSVARGRSLKESMAATREVMDPKFSSFAIYEHCLPFNVSRAYDEASGIDDPVIWTAERDREMWARLQGEG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 35016; Mature: 34884
Theoretical pI: Translated: 4.69; Mature: 4.69
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAKGFASTTDMAEKKVTFSEIGPDLYAFTAEGDPNSAVIVGDDGCIVFDAQATPAMAGKV CCCCCCCCHHHHHHCCCHHHCCCCEEEEEECCCCCCEEEEECCCEEEEECCCCHHHHHHH IERVRTVTDKPIKYVVLSHYHAVRVLGASAYQAQGIVASQETHRLIVERGQQDWDSEYGR HHHHHHHCCCCEEEEEHHHHHEEHEECCCHHHHCCCEECHHHHHHHHHCCCCHHHHHHCC FPRLFQDAQSIPGLTWPTLTFEGEMTIHLGKREVQLIQLGAGHTSGDIVAWVPDAEVMFS CHHHHHHHHHCCCCCCCEEEECCCEEEEECCCEEEEEEECCCCCCCCEEEECCCCCEEEE GDLIEYHSACYCGDAYLREWPSTLNEIRDFNPKAIAPGRGDALKGEATVREAIAMTRDFV CCHHHHCCCEEECHHHHHHHHHHHHHHHCCCCCEECCCCCCCCCCHHHHHHHHHHHHHHH SSLYGAAELSVARGRSLKESMAATREVMDPKFSSFAIYEHCLPFNVSRAYDEASGIDDPV HHHHCHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCHHHHHCCCCCHHHHHHHHCCCCCCE IWTAERDREMWARLQGEG EEECCCCHHHHHHHCCCC >Mature Secondary Structure AKGFASTTDMAEKKVTFSEIGPDLYAFTAEGDPNSAVIVGDDGCIVFDAQATPAMAGKV CCCCCCCHHHHHHCCCHHHCCCCEEEEEECCCCCCEEEEECCCEEEEECCCCHHHHHHH IERVRTVTDKPIKYVVLSHYHAVRVLGASAYQAQGIVASQETHRLIVERGQQDWDSEYGR HHHHHHHCCCCEEEEEHHHHHEEHEECCCHHHHCCCEECHHHHHHHHHCCCCHHHHHHCC FPRLFQDAQSIPGLTWPTLTFEGEMTIHLGKREVQLIQLGAGHTSGDIVAWVPDAEVMFS CHHHHHHHHHCCCCCCCEEEECCCEEEEECCCEEEEEEECCCCCCCCEEEECCCCCEEEE GDLIEYHSACYCGDAYLREWPSTLNEIRDFNPKAIAPGRGDALKGEATVREAIAMTRDFV CCHHHHCCCEEECHHHHHHHHHHHHHHHCCCCCEECCCCCCCCCCHHHHHHHHHHHHHHH SSLYGAAELSVARGRSLKESMAATREVMDPKFSSFAIYEHCLPFNVSRAYDEASGIDDPV HHHHCHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCHHHHHCCCCCHHHHHHHHCCCCCCE IWTAERDREMWARLQGEG EEECCCCHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA