| Definition | Bradyrhizobium sp. ORS278 chromosome, complete genome. |
|---|---|
| Accession | NC_009445 |
| Length | 7,456,587 |
Click here to switch to the map view.
The map label for this gene is fahA
Identifier: 146343718
GI number: 146343718
Start: 7250286
End: 7251554
Strand: Reverse
Name: fahA
Synonym: BRADO6964
Alternate gene names: NA
Gene position: 7251554-7250286 (Counterclockwise)
Preceding gene: 146343719
Following gene: 146343715
Centisome position: 97.25
GC content: 67.14
Gene sequence:
>1269_bases TTGCCCCACTCTAACGATCCCTCGCTCCGCTCCTTCATCCCGGTCGATCCGACCTCCGATTTTCCGATCCAGAACCTGCC CTATGGCGTGTTCTCGGCGGCGGACTCGCCGAAGTCCCGCGTCGGCGTCGCCATCGGCGACTACGTGCTCGACCTCGCGG TGCTCGAGGACGAAGGCCTGCTCGACCTGTCGCCGGCCTACGAGGTGTTCGCGCAACCCTCGCTCAATGCCTTCATGGCG CTCGGCCCCGCCGTGTGGTCGAGGACGCGCGCGGCGATCAGCGCGTTGTTGCGCGAGGATACTCCGCGGCTGCGCGACGA CAGGCCGCTGCGCAGCCGCGCGCTGCTGCCGCGCCAGGACGTGACGTTGCATCTGCCGTTCCGCGTCGCCGGCTACACCG ACTTCTACTCATCGAGGGAGCACGCCACCAATGTCGGAGTGATGTTCCGCGGCAAGGACAACGCGCTGCAGCCGAACTGG CTGCACATGCCGATCGGCTACAACGGCCGCGCCTCCACGGTTGTCGTGTCCGGCACGAAGGTGCGCCGGCCGCGCGGCCA GCTCAAGCCGCCGAGCGCCGACGTGCCGAGCTTCGGTCCCTGTAAGCGGCTCGATTTCGAGCTGGAGATGGGCGTCGTCA TCGGCCAGTCCTCGCGCCTCGGCGAGATGCTGACCGAGGCGCAGGCGGAAGCGATGATCTTCGGCTTCGTGCTGCTCAAC GACTGGAGCGCGCGCGACATCCAGCAATGGGAATACGTCCCGCTCGGCCCGTTCCAGGCCAAGGCGTTCGCGACCTCGAT CAGCCCGTGGGTCGTGACGCGGGAGGCGCTGGAACCGTTCCGTATCGCGGGGCCGGCGCAGCAGCCGGTGCCGTTGCCCT ATCTGCAGCAGAAGAACGCGCAGAACTACGATCTCGCGCTCGAGGTTTCGCTGAGCGCGGGCGCCGCCGCGCGGACCATT GCGCAAACCAACTTCAAATACATGTACTGGTCGAGCGTCCAGCAACTGATACACCACGCCTCGTCGGGCTGCGCGATGAG CGTTGGCGACCTCCTTGGCAGCGGCACCATCTCCGGCCCGGACAAGCACCAGCGCGGCAGCCTGTTGGAGATCAGTTGGA ACGGCACCGAGCCGGTCGAACTCGCAGGCGGCGTGAAGCGCACCTTCCTGGAAGACGGCGACTCGCTCGTCATGCGCGGC TGGTGCCAGGGCCAAGGCTATCGCGTCGGCTTCGGCGATGTGGAGGGCACGATCGTTGCTGCCGAGTAG
Upstream 100 bases:
>100_bases ATGGCCGGGCTTGACCCGGCCATCCACGTCTATCAGCCCGCCGGGTGGATATGGATGCCCGGGTCAAGCCCGGGCATGAC GATCCGTTTGGAGAAGCAGT
Downstream 100 bases:
>100_bases GCGTCATTGCGAGCGCAGCGAAGCAATCCAGAGTCGCGCGTGCAGTCCTGGATTGCTTCGCTGCGCTCGCAATGACGGCA AATGCAGTCAGCGGTTCACC
Product: fumarylacetoacetase
Products: acetoacetate; fumarate
Alternate protein names: Fumarylacetoacetate Hydrolase; Hydroxylase; Fumarylacetoacetate Hydrolase Family Protein; Fumarylacetoacetase Hydrolase; LOW QUALITY PROTEIN Fumarylacetoacetase
Number of amino acids: Translated: 422; Mature: 421
Protein sequence:
>422_residues MPHSNDPSLRSFIPVDPTSDFPIQNLPYGVFSAADSPKSRVGVAIGDYVLDLAVLEDEGLLDLSPAYEVFAQPSLNAFMA LGPAVWSRTRAAISALLREDTPRLRDDRPLRSRALLPRQDVTLHLPFRVAGYTDFYSSREHATNVGVMFRGKDNALQPNW LHMPIGYNGRASTVVVSGTKVRRPRGQLKPPSADVPSFGPCKRLDFELEMGVVIGQSSRLGEMLTEAQAEAMIFGFVLLN DWSARDIQQWEYVPLGPFQAKAFATSISPWVVTREALEPFRIAGPAQQPVPLPYLQQKNAQNYDLALEVSLSAGAAARTI AQTNFKYMYWSSVQQLIHHASSGCAMSVGDLLGSGTISGPDKHQRGSLLEISWNGTEPVELAGGVKRTFLEDGDSLVMRG WCQGQGYRVGFGDVEGTIVAAE
Sequences:
>Translated_422_residues MPHSNDPSLRSFIPVDPTSDFPIQNLPYGVFSAADSPKSRVGVAIGDYVLDLAVLEDEGLLDLSPAYEVFAQPSLNAFMA LGPAVWSRTRAAISALLREDTPRLRDDRPLRSRALLPRQDVTLHLPFRVAGYTDFYSSREHATNVGVMFRGKDNALQPNW LHMPIGYNGRASTVVVSGTKVRRPRGQLKPPSADVPSFGPCKRLDFELEMGVVIGQSSRLGEMLTEAQAEAMIFGFVLLN DWSARDIQQWEYVPLGPFQAKAFATSISPWVVTREALEPFRIAGPAQQPVPLPYLQQKNAQNYDLALEVSLSAGAAARTI AQTNFKYMYWSSVQQLIHHASSGCAMSVGDLLGSGTISGPDKHQRGSLLEISWNGTEPVELAGGVKRTFLEDGDSLVMRG WCQGQGYRVGFGDVEGTIVAAE >Mature_421_residues PHSNDPSLRSFIPVDPTSDFPIQNLPYGVFSAADSPKSRVGVAIGDYVLDLAVLEDEGLLDLSPAYEVFAQPSLNAFMAL GPAVWSRTRAAISALLREDTPRLRDDRPLRSRALLPRQDVTLHLPFRVAGYTDFYSSREHATNVGVMFRGKDNALQPNWL HMPIGYNGRASTVVVSGTKVRRPRGQLKPPSADVPSFGPCKRLDFELEMGVVIGQSSRLGEMLTEAQAEAMIFGFVLLND WSARDIQQWEYVPLGPFQAKAFATSISPWVVTREALEPFRIAGPAQQPVPLPYLQQKNAQNYDLALEVSLSAGAAARTIA QTNFKYMYWSSVQQLIHHASSGCAMSVGDLLGSGTISGPDKHQRGSLLEISWNGTEPVELAGGVKRTFLEDGDSLVMRGW CQGQGYRVGFGDVEGTIVAAE
Specific function: Unknown
COG id: COG0179
COG function: function code Q; 2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1,7-dioic acid hydratase (catechol pathway)
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Homo sapiens, GI4557587, Length=415, Percent_Identity=54.2168674698795, Blast_Score=474, Evalue=1e-134, Organism=Caenorhabditis elegans, GI17568863, Length=420, Percent_Identity=52.3809523809524, Blast_Score=439, Evalue=1e-123, Organism=Drosophila melanogaster, GI24657182, Length=415, Percent_Identity=48.1927710843374, Blast_Score=406, Evalue=1e-113,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: 3.7.1.2
Molecular weight: Translated: 46152; Mature: 46021
Theoretical pI: Translated: 5.94; Mature: 5.94
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPHSNDPSLRSFIPVDPTSDFPIQNLPYGVFSAADSPKSRVGVAIGDYVLDLAVLEDEGL CCCCCCCCHHEEECCCCCCCCCCCCCCCHHEECCCCCCHHCCEEEHHEEEEEEEECCCCC LDLSPAYEVFAQPSLNAFMALGPAVWSRTRAAISALLREDTPRLRDDRPLRSRALLPRQD EECCCHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHCCCCCCC VTLHLPFRVAGYTDFYSSREHATNVGVMFRGKDNALQPNWLHMPIGYNGRASTVVVSGTK CEEEECEEEECCHHHHCCCCCCCCEEEEEECCCCCCCCCEEEECCCCCCCCCEEEEECCE VRRPRGQLKPPSADVPSFGPCKRLDFELEMGVVIGQSSRLGEMLTEAQAEAMIFGFVLLN EECCCCCCCCCCCCCCCCCCCCCCCEEEEEEEEECCCHHHHHHHHHHHHHHEEEEEEEEC DWSARDIQQWEYVPLGPFQAKAFATSISPWVVTREALEPFRIAGPAQQPVPLPYLQQKNA CCCCCCCCCCCEECCCCCCHHHHHCCCCCCEEEHHHCCCEEECCCCCCCCCCCHHHHCCC QNYDLALEVSLSAGAAARTIAQTNFKYMYWSSVQQLIHHASSGCAMSVGDLLGSGTISGP CCCEEEEEEEECCCCHHHHHHHCCCEEEEHHHHHHHHHHCCCCCEEEHHHHHCCCCCCCC DKHQRGSLLEISWNGTEPVELAGGVKRTFLEDGDSLVMRGWCQGQGYRVGFGDVEGTIVA CCCCCCCEEEEEECCCCCHHHCCCHHHHHHHCCCCEEEEEEECCCCEEEECCCCCCEEEE AE EC >Mature Secondary Structure PHSNDPSLRSFIPVDPTSDFPIQNLPYGVFSAADSPKSRVGVAIGDYVLDLAVLEDEGL CCCCCCCHHEEECCCCCCCCCCCCCCCHHEECCCCCCHHCCEEEHHEEEEEEEECCCCC LDLSPAYEVFAQPSLNAFMALGPAVWSRTRAAISALLREDTPRLRDDRPLRSRALLPRQD EECCCHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHCCCCCCC VTLHLPFRVAGYTDFYSSREHATNVGVMFRGKDNALQPNWLHMPIGYNGRASTVVVSGTK CEEEECEEEECCHHHHCCCCCCCCEEEEEECCCCCCCCCEEEECCCCCCCCCEEEEECCE VRRPRGQLKPPSADVPSFGPCKRLDFELEMGVVIGQSSRLGEMLTEAQAEAMIFGFVLLN EECCCCCCCCCCCCCCCCCCCCCCCEEEEEEEEECCCHHHHHHHHHHHHHHEEEEEEEEC DWSARDIQQWEYVPLGPFQAKAFATSISPWVVTREALEPFRIAGPAQQPVPLPYLQQKNA CCCCCCCCCCCEECCCCCCHHHHHCCCCCCEEEHHHCCCEEECCCCCCCCCCCHHHHCCC QNYDLALEVSLSAGAAARTIAQTNFKYMYWSSVQQLIHHASSGCAMSVGDLLGSGTISGP CCCEEEEEEEECCCCHHHHHHHCCCEEEEHHHHHHHHHHCCCCCEEEHHHHHCCCCCCCC DKHQRGSLLEISWNGTEPVELAGGVKRTFLEDGDSLVMRGWCQGQGYRVGFGDVEGTIVA CCCCCCCEEEEEECCCCCHHHCCCHHHHHHHCCCCEEEEEEECCCCEEEECCCCCCEEEE AE EC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: 4-fumarylacetoacetate; H2O
Specific reaction: 4-fumarylacetoacetate + H2O = acetoacetate + fumarate
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA