| Definition | Bradyrhizobium sp. ORS278 chromosome, complete genome. |
|---|---|
| Accession | NC_009445 |
| Length | 7,456,587 |
Click here to switch to the map view.
The map label for this gene is accA1 [H]
Identifier: 146343635
GI number: 146343635
Start: 7140487
End: 7142442
Strand: Reverse
Name: accA1 [H]
Synonym: BRADO6875
Alternate gene names: 146343635
Gene position: 7142442-7140487 (Counterclockwise)
Preceding gene: 146343636
Following gene: 146343629
Centisome position: 95.79
GC content: 67.74
Gene sequence:
>1956_bases ATGTCGCGCAGGCCCTTCCACAAGGTGCTGATCGCCAACCGCGGCGAGATTGCGCTGCGTGTGATGCGGACCGCGCGCCG ACTCGGCTACCGCGTCGTCGCCGTCTACTCGGATGTCGACGCTGATGCCCCGCATGTCCGGCTTGCCGACCAGGCCGTTC GCATCGGCGCGCCGCCGCCGGCGCAGTCCTATCTGAATATTGCCGCGATCATCGCCGCGGCCAAGGCGACCGGCGCGGAC GCCGTGCATCCCGGCTACGGCTTTCTCGCCGAGAATGAGGATTTTGCTCAGGCCTGCAAGGACGCGGGTCTGGTCTTCGT CGGCCCGTCACCGGATGCGATTGCGGCGATGGGCAACAAGGCCGGCGCGAAGACGATCATGCAGCGCGCCGGCGTACCCT GCGTGCCCGGCTATCAGGGCGAGGATGGGGGTGACGAGGCGATGCTCCGCGAAGCGAAGCGCATCGGCTTCCCGGTGATG ATCAAGGCCGTCGCCGGCGGCGGCGGTCGCGGTATGCGGCTCGTGAACGAGGCGTATGCATTCCCGGATCTGCTGCGCAG CGCGCGCTCGGAGGCTGCTGCGGCGTTCGGCGACGGCACCGTCATCCTGGAGAAGGCGATCGCCAACCCGCGTCACATCG AGATCCAGGTGTTCGGAGACAGCCATGGCAACGCCGTGCATCTCGGCGAGCGCGACTGCTCGGTGCAACGGCGGCACCAG AAGCTGATCGAAGAGGCGCCGTCGCCGGCCGTCGGCCCGGAGCTACGCGCACGCATGGGTGCGGTCGCGGTGCAGGCGGT CAAGGCGCTTGGCTATGAGGGAGCTGGGACGCTCGAATTCCTGCTCGATGGCGACGGCCGGTTCTACTTCATGGAAATGA ATACGCGGCTGCAGGTCGAGCATCCCGTGACCGAGGCGTTGACGGGGCTCGATCTCGTCGAGTGGCAACTTCGCGTCGCC GCCGGCGAGCCGCTACCGCTGCGTCAGGAGCAGATCAGCTTCGTTGGCCACGCCATTGAGGTCCGGCTGTGCTCGGAGGA TGCGGCGCAGGATTTCATGCCACGATCCGGGCGCATGGCGCTGTGGCAGATGCCGGAGACGGTCCGCGTCGAGCATGCGC TGGAATCGGGAACGGAGATTCCGCCGGACTACGATTCGATGATCGCCAAGCTGATCAGCCACGGCGCAACCCGTGAGGAG GCGCGGGCCCGTCTGATCGTGGGTCTGGAGCAGGCGGTCGCGCTGGGCGTCGTGACCAACCAGTGGTTTCTGCTGTCCTG TCTGCGGCACCCGGCGTTCGCGGCGGGCAAGGCGACCACAGCCTTCATCGCAACACATCGCGACGAGCTGAGGGCGCCCT TGATCGCTGCGGAGGATATGGCGCTGCTCGCCGTGCTGCTCTCCGTCAGTCACCCGCTGGCGCATCCCGTCCGCCGGGGG CGTTCGCTCGCCGCCACCTTTGCGACGCCGCTCCGTTTCGAGCTTGGCGGCGAGTTGAGGGAGTGCGAGCTGTCGCGCGA TCGTGACGGCAGCTATTGTGTGACGCACAATGGCGCGGAGCAGCGCAGCGAGATCGTCACGCTCGATGCCGATACGATTC GAATCCGCCGGGGCGACGTCGTCGACGTCGTCCGCTTCGCGCGCGACGGTGATCGGCTGTTCGTACAGTCGCGTGGTCGG ACGCTGGTGCTGCGCGACCTCACGCTGGGGGCGCCGCAGTCCACCGCGGCGGCCGGCGGTGATGGCAAGGTGCGCGCCGC GTTGAACGGCCGCGTCGTCGCCATGCTCGTCAAGGCCGGCGATCAGGTGGCCGCGGGACAGCCGGTGCTGACTCTGGAAG CGATGAAGATGGAGCACGTCCACACGGCCGGCTTGGCCGGGACTGTGAGTGCGATCGCGGTCGCTGAGGGCGATCAGGTG ACGACGGGACAGATCGTGATCGAGATCAAGCGGTGA
Upstream 100 bases:
>100_bases AGGTGCTGGCGATCTGCCGCGAGGCCGAAGCGCGCGCGCCGCAGCGGATGCAGTTCTCGGTGGCCCGGCCATGACAAGGG ACATCAGCGGAGAGAAGACG
Downstream 100 bases:
>100_bases TTGCCGGGCCGTGGTTTCGCTGTCTGATCGGGTGAGGAGTTAAGCTGCGTCTCATCGCGGCAGTTGGCGCCGCAACGTTG CGACCAGGCGCGACGTCTGG
Product: putative biotin carboxylase
Products: NA
Alternate protein names: Biotin carboxylase; Biotin carboxyl carrier protein; BCCP [H]
Number of amino acids: Translated: 651; Mature: 650
Protein sequence:
>651_residues MSRRPFHKVLIANRGEIALRVMRTARRLGYRVVAVYSDVDADAPHVRLADQAVRIGAPPPAQSYLNIAAIIAAAKATGAD AVHPGYGFLAENEDFAQACKDAGLVFVGPSPDAIAAMGNKAGAKTIMQRAGVPCVPGYQGEDGGDEAMLREAKRIGFPVM IKAVAGGGGRGMRLVNEAYAFPDLLRSARSEAAAAFGDGTVILEKAIANPRHIEIQVFGDSHGNAVHLGERDCSVQRRHQ KLIEEAPSPAVGPELRARMGAVAVQAVKALGYEGAGTLEFLLDGDGRFYFMEMNTRLQVEHPVTEALTGLDLVEWQLRVA AGEPLPLRQEQISFVGHAIEVRLCSEDAAQDFMPRSGRMALWQMPETVRVEHALESGTEIPPDYDSMIAKLISHGATREE ARARLIVGLEQAVALGVVTNQWFLLSCLRHPAFAAGKATTAFIATHRDELRAPLIAAEDMALLAVLLSVSHPLAHPVRRG RSLAATFATPLRFELGGELRECELSRDRDGSYCVTHNGAEQRSEIVTLDADTIRIRRGDVVDVVRFARDGDRLFVQSRGR TLVLRDLTLGAPQSTAAAGGDGKVRAALNGRVVAMLVKAGDQVAAGQPVLTLEAMKMEHVHTAGLAGTVSAIAVAEGDQV TTGQIVIEIKR
Sequences:
>Translated_651_residues MSRRPFHKVLIANRGEIALRVMRTARRLGYRVVAVYSDVDADAPHVRLADQAVRIGAPPPAQSYLNIAAIIAAAKATGAD AVHPGYGFLAENEDFAQACKDAGLVFVGPSPDAIAAMGNKAGAKTIMQRAGVPCVPGYQGEDGGDEAMLREAKRIGFPVM IKAVAGGGGRGMRLVNEAYAFPDLLRSARSEAAAAFGDGTVILEKAIANPRHIEIQVFGDSHGNAVHLGERDCSVQRRHQ KLIEEAPSPAVGPELRARMGAVAVQAVKALGYEGAGTLEFLLDGDGRFYFMEMNTRLQVEHPVTEALTGLDLVEWQLRVA AGEPLPLRQEQISFVGHAIEVRLCSEDAAQDFMPRSGRMALWQMPETVRVEHALESGTEIPPDYDSMIAKLISHGATREE ARARLIVGLEQAVALGVVTNQWFLLSCLRHPAFAAGKATTAFIATHRDELRAPLIAAEDMALLAVLLSVSHPLAHPVRRG RSLAATFATPLRFELGGELRECELSRDRDGSYCVTHNGAEQRSEIVTLDADTIRIRRGDVVDVVRFARDGDRLFVQSRGR TLVLRDLTLGAPQSTAAAGGDGKVRAALNGRVVAMLVKAGDQVAAGQPVLTLEAMKMEHVHTAGLAGTVSAIAVAEGDQV TTGQIVIEIKR >Mature_650_residues SRRPFHKVLIANRGEIALRVMRTARRLGYRVVAVYSDVDADAPHVRLADQAVRIGAPPPAQSYLNIAAIIAAAKATGADA VHPGYGFLAENEDFAQACKDAGLVFVGPSPDAIAAMGNKAGAKTIMQRAGVPCVPGYQGEDGGDEAMLREAKRIGFPVMI KAVAGGGGRGMRLVNEAYAFPDLLRSARSEAAAAFGDGTVILEKAIANPRHIEIQVFGDSHGNAVHLGERDCSVQRRHQK LIEEAPSPAVGPELRARMGAVAVQAVKALGYEGAGTLEFLLDGDGRFYFMEMNTRLQVEHPVTEALTGLDLVEWQLRVAA GEPLPLRQEQISFVGHAIEVRLCSEDAAQDFMPRSGRMALWQMPETVRVEHALESGTEIPPDYDSMIAKLISHGATREEA RARLIVGLEQAVALGVVTNQWFLLSCLRHPAFAAGKATTAFIATHRDELRAPLIAAEDMALLAVLLSVSHPLAHPVRRGR SLAATFATPLRFELGGELRECELSRDRDGSYCVTHNGAEQRSEIVTLDADTIRIRRGDVVDVVRFARDGDRLFVQSRGRT LVLRDLTLGAPQSTAAAGGDGKVRAALNGRVVAMLVKAGDQVAAGQPVLTLEAMKMEHVHTAGLAGTVSAIAVAEGDQVT TGQIVIEIKR
Specific function: This protein carries two functions:biotin carboxyl carrier protein and biotin carboxyltransferase [H]
COG id: COG4770
COG function: function code I; Acetyl/propionyl-CoA carboxylase, alpha subunit
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 biotinyl-binding domain [H]
Homologues:
Organism=Homo sapiens, GI116805327, Length=681, Percent_Identity=42.2907488986784, Blast_Score=520, Evalue=1e-147, Organism=Homo sapiens, GI189095269, Length=674, Percent_Identity=40.0593471810089, Blast_Score=441, Evalue=1e-123, Organism=Homo sapiens, GI65506442, Length=676, Percent_Identity=39.9408284023669, Blast_Score=440, Evalue=1e-123, Organism=Homo sapiens, GI295821183, Length=662, Percent_Identity=39.4259818731118, Blast_Score=429, Evalue=1e-120, Organism=Homo sapiens, GI106049528, Length=450, Percent_Identity=46.4444444444444, Blast_Score=379, Evalue=1e-105, Organism=Homo sapiens, GI106049295, Length=450, Percent_Identity=46.4444444444444, Blast_Score=379, Evalue=1e-105, Organism=Homo sapiens, GI106049292, Length=450, Percent_Identity=46.4444444444444, Blast_Score=379, Evalue=1e-105, Organism=Homo sapiens, GI38679974, Length=700, Percent_Identity=29.7142857142857, Blast_Score=273, Evalue=3e-73, Organism=Homo sapiens, GI38679977, Length=700, Percent_Identity=29.7142857142857, Blast_Score=273, Evalue=3e-73, Organism=Homo sapiens, GI38679967, Length=700, Percent_Identity=29.7142857142857, Blast_Score=273, Evalue=3e-73, Organism=Homo sapiens, GI38679971, Length=700, Percent_Identity=29.7142857142857, Blast_Score=273, Evalue=3e-73, Organism=Homo sapiens, GI38679960, Length=700, Percent_Identity=29.7142857142857, Blast_Score=273, Evalue=3e-73, Organism=Homo sapiens, GI134142062, Length=693, Percent_Identity=28.8600288600289, Blast_Score=248, Evalue=1e-65, Organism=Escherichia coli, GI1789654, Length=439, Percent_Identity=48.9749430523918, Blast_Score=406, Evalue=1e-114, Organism=Escherichia coli, GI1786280, Length=201, Percent_Identity=27.363184079602, Blast_Score=63, Evalue=8e-11, Organism=Caenorhabditis elegans, GI71987519, Length=665, Percent_Identity=42.7067669172932, Blast_Score=484, Evalue=1e-137, Organism=Caenorhabditis elegans, GI17567343, Length=685, Percent_Identity=39.1240875912409, Blast_Score=434, Evalue=1e-122, Organism=Caenorhabditis elegans, GI17562816, Length=450, Percent_Identity=46, Blast_Score=374, Evalue=1e-103, Organism=Caenorhabditis elegans, GI133931226, Length=713, Percent_Identity=25.5259467040673, Blast_Score=213, Evalue=4e-55, Organism=Caenorhabditis elegans, GI71997168, Length=706, Percent_Identity=24.3626062322946, Blast_Score=193, Evalue=2e-49, Organism=Caenorhabditis elegans, GI71997163, Length=467, Percent_Identity=28.4796573875803, Blast_Score=191, Evalue=1e-48, Organism=Saccharomyces cerevisiae, GI6319685, Length=445, Percent_Identity=43.3707865168539, Blast_Score=374, Evalue=1e-104, Organism=Saccharomyces cerevisiae, GI6319695, Length=446, Percent_Identity=42.6008968609865, Blast_Score=330, Evalue=4e-91, Organism=Saccharomyces cerevisiae, GI6321376, Length=446, Percent_Identity=43.4977578475336, Blast_Score=328, Evalue=1e-90, Organism=Saccharomyces cerevisiae, GI6324343, Length=698, Percent_Identity=28.6532951289398, Blast_Score=241, Evalue=3e-64, Organism=Saccharomyces cerevisiae, GI6323863, Length=704, Percent_Identity=26.9886363636364, Blast_Score=239, Evalue=8e-64, Organism=Drosophila melanogaster, GI24651757, Length=670, Percent_Identity=43.134328358209, Blast_Score=506, Evalue=1e-143, Organism=Drosophila melanogaster, GI24651759, Length=629, Percent_Identity=41.81240063593, Blast_Score=454, Evalue=1e-128, Organism=Drosophila melanogaster, GI24652212, Length=450, Percent_Identity=47.1111111111111, Blast_Score=375, Evalue=1e-104, Organism=Drosophila melanogaster, GI24652210, Length=450, Percent_Identity=47.1111111111111, Blast_Score=375, Evalue=1e-104, Organism=Drosophila melanogaster, GI24652214, Length=450, Percent_Identity=47.1111111111111, Blast_Score=375, Evalue=1e-104, Organism=Drosophila melanogaster, GI19921944, Length=450, Percent_Identity=47.1111111111111, Blast_Score=375, Evalue=1e-104, Organism=Drosophila melanogaster, GI24652216, Length=450, Percent_Identity=47.1111111111111, Blast_Score=375, Evalue=1e-104, Organism=Drosophila melanogaster, GI281363050, Length=450, Percent_Identity=47.1111111111111, Blast_Score=374, Evalue=1e-104, Organism=Drosophila melanogaster, GI24652224, Length=450, Percent_Identity=47.1111111111111, Blast_Score=374, Evalue=1e-104, Organism=Drosophila melanogaster, GI24652222, Length=450, Percent_Identity=47.1111111111111, Blast_Score=374, Evalue=1e-104, Organism=Drosophila melanogaster, GI24652220, Length=450, Percent_Identity=47.1111111111111, Blast_Score=374, Evalue=1e-104, Organism=Drosophila melanogaster, GI24652218, Length=450, Percent_Identity=47.1111111111111, Blast_Score=374, Evalue=1e-104, Organism=Drosophila melanogaster, GI161076409, Length=702, Percent_Identity=28.7749287749288, Blast_Score=256, Evalue=3e-68, Organism=Drosophila melanogaster, GI161076407, Length=702, Percent_Identity=28.7749287749288, Blast_Score=256, Evalue=3e-68, Organism=Drosophila melanogaster, GI24586460, Length=702, Percent_Identity=28.7749287749288, Blast_Score=256, Evalue=3e-68, Organism=Drosophila melanogaster, GI24586458, Length=702, Percent_Identity=28.7749287749288, Blast_Score=256, Evalue=4e-68,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011761 - InterPro: IPR013815 - InterPro: IPR013816 - InterPro: IPR001882 - InterPro: IPR011764 - InterPro: IPR005482 - InterPro: IPR000089 - InterPro: IPR005479 - InterPro: IPR005481 - InterPro: IPR013817 - InterPro: IPR016185 - InterPro: IPR011054 - InterPro: IPR011053 [H]
Pfam domain/function: PF02785 Biotin_carb_C; PF00364 Biotin_lipoyl; PF00289 CPSase_L_chain; PF02786 CPSase_L_D2 [H]
EC number: =6.3.4.14 [H]
Molecular weight: Translated: 69757; Mature: 69626
Theoretical pI: Translated: 6.90; Mature: 6.90
Prosite motif: PS50975 ATP_GRASP ; PS00867 CPSASE_2 ; PS50979 BC ; PS50968 BIOTINYL_LIPOYL
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSRRPFHKVLIANRGEIALRVMRTARRLGYRVVAVYSDVDADAPHVRLADQAVRIGAPPP CCCCCCCCEEEECCCHHHHHHHHHHHHCCEEEEEEEECCCCCCCCEEECCCEEECCCCCC AQSYLNIAAIIAAAKATGADAVHPGYGFLAENEDFAQACKDAGLVFVGPSPDAIAAMGNK HHHHHHHHHHHHHHHCCCCCCCCCCCCEEECCHHHHHHHHHCCEEEECCCCCHHHHCCCC AGAKTIMQRAGVPCVPGYQGEDGGDEAMLREAKRIGFPVMIKAVAGGGGRGMRLVNEAYA HHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHCCCCEEEEEEECCCCCCHHHHHHHHH FPDLLRSARSEAAAAFGDGTVILEKAIANPRHIEIQVFGDSHGNAVHLGERDCSVQRRHQ HHHHHHHHHHHHHHHCCCCEEEEEHHCCCCCEEEEEEEECCCCCEEEECCCCHHHHHHHH KLIEEAPSPAVGPELRARMGAVAVQAVKALGYEGAGTLEFLLDGDGRFYFMEMNTRLQVE HHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCEEEEEEECCEEEEC HPVTEALTGLDLVEWQLRVAAGEPLPLRQEQISFVGHAIEVRLCSEDAAQDFMPRSGRMA CCHHHHHHCCHHEEEEEEEECCCCCCCCHHHHHHHCCEEEEEECCCHHHHHCCCCCCCEE LWQMPETVRVEHALESGTEIPPDYDSMIAKLISHGATREEARARLIVGLEQAVALGVVTN EECCCCHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCHHHHHHHHEEEHHHHHEEHHHHC QWFLLSCLRHPAFAAGKATTAFIATHRDELRAPLIAAEDMALLAVLLSVSHPLAHPVRRG HHHHHHHHHCCCCCCCCCEEEEEEECHHHHCCCEEEHHHHHHHHHHHHHCCHHHHHHHCC RSLAATFATPLRFELGGELRECELSRDRDGSYCVTHNGAEQRSEIVTLDADTIRIRRGDV CCEEEHHCCCEEEECCCCCEECCCCCCCCCCEEEECCCHHHCCCEEEEECCEEEEECCCH VDVVRFARDGDRLFVQSRGRTLVLRDLTLGAPQSTAAAGGDGKVRAALNGRVVAMLVKAG HHHHHHHCCCCEEEEECCCCEEEEEEEECCCCCCCCCCCCCCEEEEEECCEEEEEEEECC DQVAAGQPVLTLEAMKMEHVHTAGLAGTVSAIAVAEGDQVTTGQIVIEIKR CCCCCCCCEEEEEHHHHHHHHHCCCHHHHHEEEEECCCCEEECEEEEEEEC >Mature Secondary Structure SRRPFHKVLIANRGEIALRVMRTARRLGYRVVAVYSDVDADAPHVRLADQAVRIGAPPP CCCCCCCEEEECCCHHHHHHHHHHHHCCEEEEEEEECCCCCCCCEEECCCEEECCCCCC AQSYLNIAAIIAAAKATGADAVHPGYGFLAENEDFAQACKDAGLVFVGPSPDAIAAMGNK HHHHHHHHHHHHHHHCCCCCCCCCCCCEEECCHHHHHHHHHCCEEEECCCCCHHHHCCCC AGAKTIMQRAGVPCVPGYQGEDGGDEAMLREAKRIGFPVMIKAVAGGGGRGMRLVNEAYA HHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHCCCCEEEEEEECCCCCCHHHHHHHHH FPDLLRSARSEAAAAFGDGTVILEKAIANPRHIEIQVFGDSHGNAVHLGERDCSVQRRHQ HHHHHHHHHHHHHHHCCCCEEEEEHHCCCCCEEEEEEEECCCCCEEEECCCCHHHHHHHH KLIEEAPSPAVGPELRARMGAVAVQAVKALGYEGAGTLEFLLDGDGRFYFMEMNTRLQVE HHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCEEEEEEECCEEEEC HPVTEALTGLDLVEWQLRVAAGEPLPLRQEQISFVGHAIEVRLCSEDAAQDFMPRSGRMA CCHHHHHHCCHHEEEEEEEECCCCCCCCHHHHHHHCCEEEEEECCCHHHHHCCCCCCCEE LWQMPETVRVEHALESGTEIPPDYDSMIAKLISHGATREEARARLIVGLEQAVALGVVTN EECCCCHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCHHHHHHHHEEEHHHHHEEHHHHC QWFLLSCLRHPAFAAGKATTAFIATHRDELRAPLIAAEDMALLAVLLSVSHPLAHPVRRG HHHHHHHHHCCCCCCCCCEEEEEEECHHHHCCCEEEHHHHHHHHHHHHHCCHHHHHHHCC RSLAATFATPLRFELGGELRECELSRDRDGSYCVTHNGAEQRSEIVTLDADTIRIRRGDV CCEEEHHCCCEEEECCCCCEECCCCCCCCCCEEEECCCHHHCCCEEEEECCEEEEECCCH VDVVRFARDGDRLFVQSRGRTLVLRDLTLGAPQSTAAAGGDGKVRAALNGRVVAMLVKAG HHHHHHHCCCCEEEEECCCCEEEEEEEECCCCCCCCCCCCCCEEEEEECCEEEEEEEECC DQVAAGQPVLTLEAMKMEHVHTAGLAGTVSAIAVAEGDQVTTGQIVIEIKR CCCCCCCCEEEEEHHHHHHHHHCCCHHHHHEEEEECCCCEEECEEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 12788972 [H]