| Definition | Bradyrhizobium sp. ORS278 chromosome, complete genome. |
|---|---|
| Accession | NC_009445 |
| Length | 7,456,587 |
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The map label for this gene is 146343446
Identifier: 146343446
GI number: 146343446
Start: 6938223
End: 6938771
Strand: Direct
Name: 146343446
Synonym: BRADO6675
Alternate gene names: NA
Gene position: 6938223-6938771 (Clockwise)
Preceding gene: 146343444
Following gene: 146343448
Centisome position: 93.05
GC content: 69.4
Gene sequence:
>549_bases ATGCCCCGCATTGCTCTCGTCGACACCGCCCGCGCCGCGCCTGGCGTTCTCGCCACCCTTTCCGCCGTGAAGGCCAAGAT CGGCATGACGCCGAACCTGTTCTCGACCTTCGCCCAGTCCGCGGCCGTGCTGAACGGCTATGTCGCCTTCTCGGACGCGC TGGCCAACGGCGCGCTCAGCGCCCGGCAGCGCGAGATCGTCGCGCTGGCCGTCGCCCAGGCCAATGGCTGCGAATATTGC CTCGCGGCGCATTCGCTGATGGGCAAGGGCGCCGGCCTGAGCCCGGATGGCCTGCGCAAGGCCCGGCAGGGTACTGCTGA CGACGCCGTCGACGCGGCGGTCGCCCGCTTCGCGCGCCGCGTGCTCGACAGCAAGGGTCAGGTCGCGGATTCCGATCTTG CGGCGGCGCGTGCGGCCGGTCTCGACGACGGCCGACTGCTCGAGATCATCGCCAATGTCGCGATCAACGTGCTCACCAAC TACACCAACAACGCGGCGCAGACCGTCGTCGACTTCCCCAAGGTCGAGCTGACGCTGCAGCCGGCCTGA
Upstream 100 bases:
>100_bases AAACGGATCCATGGGACGATCTGCAATGTTTCTGGCACCTGCTGTGACTCATAGTCCTGCATAGAGGGGGCGTGCAACTC CTCAACGAAGGATCCCCTCC
Downstream 100 bases:
>100_bases TCAATCAGACACGCGGCCGCCCGCCGGAGTTCTCTCCTCCTGGCGGGCGGCAAGTCCTCGGTCTACGCGTCTTTCTTCAC ATTCATCCGCTCGACCAGAT
Product: putative antioxydant protein
Products: NA
Alternate protein names: Alkylhydroperoxidase Like Protein AhpD Family; Alkylhydroperoxidase AhpD Core; Peroxidase-Related; Carboxymuconolactone Decarboxylase; Alkylhydroperoxidase AhpD Family Core Domain Protein; Alkylhydroperoxidase-Like Protein AhpD Family; Alpha/Beta Hydrolase; 24 KDa Macrophage-Induced Protein; Carboxymuconolactone Decarboxylase Family; Mip Protein; Carboxymuconolactone Decarboxylase Family Protein; MIP-(Macrophage Infectivity Potentiator)-Like Protein; Alkylhydroperoxidase AhpD; Macrophage Infectivity Potentiator-Related Protein; Antioxydant Protein; Peroxidase; Peroxidase-Like Protein
Number of amino acids: Translated: 182; Mature: 181
Protein sequence:
>182_residues MPRIALVDTARAAPGVLATLSAVKAKIGMTPNLFSTFAQSAAVLNGYVAFSDALANGALSARQREIVALAVAQANGCEYC LAAHSLMGKGAGLSPDGLRKARQGTADDAVDAAVARFARRVLDSKGQVADSDLAAARAAGLDDGRLLEIIANVAINVLTN YTNNAAQTVVDFPKVELTLQPA
Sequences:
>Translated_182_residues MPRIALVDTARAAPGVLATLSAVKAKIGMTPNLFSTFAQSAAVLNGYVAFSDALANGALSARQREIVALAVAQANGCEYC LAAHSLMGKGAGLSPDGLRKARQGTADDAVDAAVARFARRVLDSKGQVADSDLAAARAAGLDDGRLLEIIANVAINVLTN YTNNAAQTVVDFPKVELTLQPA >Mature_181_residues PRIALVDTARAAPGVLATLSAVKAKIGMTPNLFSTFAQSAAVLNGYVAFSDALANGALSARQREIVALAVAQANGCEYCL AAHSLMGKGAGLSPDGLRKARQGTADDAVDAAVARFARRVLDSKGQVADSDLAAARAAGLDDGRLLEIIANVAINVLTNY TNNAAQTVVDFPKVELTLQPA
Specific function: Unknown
COG id: COG2128
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18678; Mature: 18547
Theoretical pI: Translated: 8.21; Mature: 8.21
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPRIALVDTARAAPGVLATLSAVKAKIGMTPNLFSTFAQSAAVLNGYVAFSDALANGALS CCCEEEEECCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ARQREIVALAVAQANGCEYCLAAHSLMGKGAGLSPDGLRKARQGTADDAVDAAVARFARR HHHHHHHHEEEECCCCCHHHHHHHHHHCCCCCCCHHHHHHHHCCCCHHHHHHHHHHHHHH VLDSKGQVADSDLAAARAAGLDDGRLLEIIANVAINVLTNYTNNAAQTVVDFPKVELTLQ HHCCCCCCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHCCCCEEEEEE PA CC >Mature Secondary Structure PRIALVDTARAAPGVLATLSAVKAKIGMTPNLFSTFAQSAAVLNGYVAFSDALANGALS CCEEEEECCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ARQREIVALAVAQANGCEYCLAAHSLMGKGAGLSPDGLRKARQGTADDAVDAAVARFARR HHHHHHHHEEEECCCCCHHHHHHHHHHCCCCCCCHHHHHHHHCCCCHHHHHHHHHHHHHH VLDSKGQVADSDLAAARAAGLDDGRLLEIIANVAINVLTNYTNNAAQTVVDFPKVELTLQ HHCCCCCCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHCCCCEEEEEE PA CC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA