| Definition | Bradyrhizobium sp. ORS278 chromosome, complete genome. |
|---|---|
| Accession | NC_009445 |
| Length | 7,456,587 |
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The map label for this gene is 146343348
Identifier: 146343348
GI number: 146343348
Start: 6823893
End: 6825383
Strand: Direct
Name: 146343348
Synonym: BRADO6575
Alternate gene names: NA
Gene position: 6823893-6825383 (Clockwise)
Preceding gene: 146343347
Following gene: 146343354
Centisome position: 91.51
GC content: 67.4
Gene sequence:
>1491_bases GTGCGTAATCTTGCGAGCCGGGTTGGGCCGATCGTGGGAGCAGCATCCGCCTGTCAGGCGATCGACCAGGGCCGCGTTCA GGCCATTGTCGACAAGTTTCGCGAGGTGATCCGGGAGGCCTCCACGGGCGGCTCGGATCGCGACGAGCTGACGCGCGTGT TCAACGGCTACGTGGCCGACGGGCGCAACCGCGTCGGTGCGGCACAGACCGACTGCAACACGGCGGGTCGCCAGCTCGCC GAACTGGAGCGCTCGCTCGGTCAGACCGCACCCAGCCAGGCGGCCACCAGCCTCGCCGGCGTGATCGCGCCGTCCGCGGC CGTTGCCGCGACGGCGCCGACCGTGACGCTGCCGCCGCCCACCGCGAGCAACGTCCAGGGCGTCACCCAGAACGAGATCC GCTTCGGCATTGCCGGTCCGTTCTCGGGCGCGTCCAAGGAGCTCGGACGGCAGATGAAGATGGGCATCGAGGCCGCCTTC AACCGCGCCAACGACAGCGGCGGCATCAATGGACGCTCGCTGCGCCTGTTCTCGGCCGACGACGGCTACGAGCCGTCGCG TACGCTCGACGCGATGAAGCAGCTCTACGAGAAGGACAAGGTGTTCGGCTTCGTCGGCAATGTCGGCACGCCGACCTCGG CGGTGGCGATGCCCTACGCGCTGCAGCGCCGGGTGCTGTTCTACGGCGCCTTCACCGGCGCCAACATCCTGCGCAACGAT CCGCCGGATCGCTACGTCTTCAACTACCGCGCCAGCTACGCGGAAGAAACCGACACGGTCGTGCGCTATCTCGTGAAGCT GCGTCGCCTGCAGCCGCGCGACATCGCCGTGTTCGCCCAGCAGGACTCCTATGGCGATGCCGGCTTCTCCGGCGTGGCCA AGGCGTTCCGCTCGCTTGGGCTGGCCGACACCTCGATCGTCCGCTTCAACTACAAGCGCAACACTGTCGACGTGGACGAG GCTGTCAACCAGCTGCGCGCCATGAAGAACCCGCCGAAGGCGATCGTCATGGTGGCGACCTACCGGGCGGCCGCGAAGTT CATCGAGAAGACGCGCGACCTGTACCCGAACATGATCTACACCAACGTGTCCTTCGTGGGCTCGACAGAGCTGTCGGACG AGCTGATGCTGCTCGGCCCGCGCTACGCCAACGGCGTGATCGTCACCCAGGTGGTGCCGGCGGTCGGCGGCTATTCGAGC GCCGTGCTCGAGTACAAGAGCGCGCTGGAGAAGTACTTCCCCGGCGAGGCACCGTCCTACGTCTCGTTCGAGGGCTACGT CTCGGCCAACGTGCTCGTCCAGGCGCTCCGCAAGGTCGGCCCGCAGCTCGACACCGAGGCGCTGATCGACACGCTGGAGA ACATGCAGAGCGTCGATCTCGGCCTTGGCGCCAAGCTCGGCTTCGGCCGCGCCGAGCACCAGGCCTCGCACAAGATCTGG GGCACCGCGCTCGACGAGCGCGGCAAGTTCCAGGCGATCGAGCTGGAATAG
Upstream 100 bases:
>100_bases CCATAGTGGGATAGTGGCAATGAGCTTTCGTTCTAGCGTGTTCTTGGTTGCGGCATTGCTCGCAACGCCCGCCAGCGCGG CGGGCACCAATGCGGATGTG
Downstream 100 bases:
>100_bases CTTTCCACCCGACTTGATTGTTCGACCGATGGACGCGGCAGCCTGAGGCTGCCGCGTCTTTCATTTCGGCCGGGATGCTC ACATCGAATTGCAGCGTCGA
Product: putative ABC-type branched-chain amino acid transport system, periplasmic component
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 496; Mature: 496
Protein sequence:
>496_residues MRNLASRVGPIVGAASACQAIDQGRVQAIVDKFREVIREASTGGSDRDELTRVFNGYVADGRNRVGAAQTDCNTAGRQLA ELERSLGQTAPSQAATSLAGVIAPSAAVAATAPTVTLPPPTASNVQGVTQNEIRFGIAGPFSGASKELGRQMKMGIEAAF NRANDSGGINGRSLRLFSADDGYEPSRTLDAMKQLYEKDKVFGFVGNVGTPTSAVAMPYALQRRVLFYGAFTGANILRND PPDRYVFNYRASYAEETDTVVRYLVKLRRLQPRDIAVFAQQDSYGDAGFSGVAKAFRSLGLADTSIVRFNYKRNTVDVDE AVNQLRAMKNPPKAIVMVATYRAAAKFIEKTRDLYPNMIYTNVSFVGSTELSDELMLLGPRYANGVIVTQVVPAVGGYSS AVLEYKSALEKYFPGEAPSYVSFEGYVSANVLVQALRKVGPQLDTEALIDTLENMQSVDLGLGAKLGFGRAEHQASHKIW GTALDERGKFQAIELE
Sequences:
>Translated_496_residues MRNLASRVGPIVGAASACQAIDQGRVQAIVDKFREVIREASTGGSDRDELTRVFNGYVADGRNRVGAAQTDCNTAGRQLA ELERSLGQTAPSQAATSLAGVIAPSAAVAATAPTVTLPPPTASNVQGVTQNEIRFGIAGPFSGASKELGRQMKMGIEAAF NRANDSGGINGRSLRLFSADDGYEPSRTLDAMKQLYEKDKVFGFVGNVGTPTSAVAMPYALQRRVLFYGAFTGANILRND PPDRYVFNYRASYAEETDTVVRYLVKLRRLQPRDIAVFAQQDSYGDAGFSGVAKAFRSLGLADTSIVRFNYKRNTVDVDE AVNQLRAMKNPPKAIVMVATYRAAAKFIEKTRDLYPNMIYTNVSFVGSTELSDELMLLGPRYANGVIVTQVVPAVGGYSS AVLEYKSALEKYFPGEAPSYVSFEGYVSANVLVQALRKVGPQLDTEALIDTLENMQSVDLGLGAKLGFGRAEHQASHKIW GTALDERGKFQAIELE >Mature_496_residues MRNLASRVGPIVGAASACQAIDQGRVQAIVDKFREVIREASTGGSDRDELTRVFNGYVADGRNRVGAAQTDCNTAGRQLA ELERSLGQTAPSQAATSLAGVIAPSAAVAATAPTVTLPPPTASNVQGVTQNEIRFGIAGPFSGASKELGRQMKMGIEAAF NRANDSGGINGRSLRLFSADDGYEPSRTLDAMKQLYEKDKVFGFVGNVGTPTSAVAMPYALQRRVLFYGAFTGANILRND PPDRYVFNYRASYAEETDTVVRYLVKLRRLQPRDIAVFAQQDSYGDAGFSGVAKAFRSLGLADTSIVRFNYKRNTVDVDE AVNQLRAMKNPPKAIVMVATYRAAAKFIEKTRDLYPNMIYTNVSFVGSTELSDELMLLGPRYANGVIVTQVVPAVGGYSS AVLEYKSALEKYFPGEAPSYVSFEGYVSANVLVQALRKVGPQLDTEALIDTLENMQSVDLGLGAKLGFGRAEHQASHKIW GTALDERGKFQAIELE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 53541; Mature: 53541
Theoretical pI: Translated: 8.78; Mature: 8.78
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRNLASRVGPIVGAASACQAIDQGRVQAIVDKFREVIREASTGGSDRDELTRVFNGYVAD CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCC GRNRVGAAQTDCNTAGRQLAELERSLGQTAPSQAATSLAGVIAPSAAVAATAPTVTLPPP CCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCHHHHHCCCEEECCCC TASNVQGVTQNEIRFGIAGPFSGASKELGRQMKMGIEAAFNRANDSGGINGRSLRLFSAD CCCCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEECC DGYEPSRTLDAMKQLYEKDKVFGFVGNVGTPTSAVAMPYALQRRVLFYGAFTGANILRND CCCCHHHHHHHHHHHHHHHHHEEEECCCCCCHHHHHHHHHHHHHHHEEECCCCCHHHCCC PPDRYVFNYRASYAEETDTVVRYLVKLRRLQPRDIAVFAQQDSYGDAGFSGVAKAFRSLG CCCCEEEEEHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCHHHHHHHHHHCC LADTSIVRFNYKRNTVDVDEAVNQLRAMKNPPKAIVMVATYRAAAKFIEKTRDLYPNMIY CCCCEEEEEECCCCCCCHHHHHHHHHHHCCCCCEEEEEEHHHHHHHHHHHHHHHCCCEEE TNVSFVGSTELSDELMLLGPRYANGVIVTQVVPAVGGYSSAVLEYKSALEKYFPGEAPSY EEEEEEECCCCCCCEEEECCCCCCCEEEEEHHHHHCCHHHHHHHHHHHHHHHCCCCCCCC VSFEGYVSANVLVQALRKVGPQLDTEALIDTLENMQSVDLGLGAKLGFGRAEHQASHKIW EEECCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHH GTALDERGKFQAIELE CCHHCCCCCEEEEECC >Mature Secondary Structure MRNLASRVGPIVGAASACQAIDQGRVQAIVDKFREVIREASTGGSDRDELTRVFNGYVAD CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCC GRNRVGAAQTDCNTAGRQLAELERSLGQTAPSQAATSLAGVIAPSAAVAATAPTVTLPPP CCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCHHHHHCCCEEECCCC TASNVQGVTQNEIRFGIAGPFSGASKELGRQMKMGIEAAFNRANDSGGINGRSLRLFSAD CCCCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEECC DGYEPSRTLDAMKQLYEKDKVFGFVGNVGTPTSAVAMPYALQRRVLFYGAFTGANILRND CCCCHHHHHHHHHHHHHHHHHEEEECCCCCCHHHHHHHHHHHHHHHEEECCCCCHHHCCC PPDRYVFNYRASYAEETDTVVRYLVKLRRLQPRDIAVFAQQDSYGDAGFSGVAKAFRSLG CCCCEEEEEHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCHHHHHHHHHHCC LADTSIVRFNYKRNTVDVDEAVNQLRAMKNPPKAIVMVATYRAAAKFIEKTRDLYPNMIY CCCCEEEEEECCCCCCCHHHHHHHHHHHCCCCCEEEEEEHHHHHHHHHHHHHHHCCCEEE TNVSFVGSTELSDELMLLGPRYANGVIVTQVVPAVGGYSSAVLEYKSALEKYFPGEAPSY EEEEEEECCCCCCCEEEECCCCCCCEEEEEHHHHHCCHHHHHHHHHHHHHHHCCCCCCCC VSFEGYVSANVLVQALRKVGPQLDTEALIDTLENMQSVDLGLGAKLGFGRAEHQASHKIW EEECCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHH GTALDERGKFQAIELE CCHHCCCCCEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA