| Definition | Bradyrhizobium sp. ORS278 chromosome, complete genome. |
|---|---|
| Accession | NC_009445 |
| Length | 7,456,587 |
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The map label for this gene is 146343347
Identifier: 146343347
GI number: 146343347
Start: 6822156
End: 6823595
Strand: Direct
Name: 146343347
Synonym: BRADO6574
Alternate gene names: NA
Gene position: 6822156-6823595 (Clockwise)
Preceding gene: 146343346
Following gene: 146343348
Centisome position: 91.49
GC content: 65.07
Gene sequence:
>1440_bases GTGAGGGAGCTCGCGGGCCGGGTTGGACCGATTGTGGGACAGGCCTCGGCCTGCCCGGACATCGCGCAAGGGCGCGTGCA GACCATCGTCGACAAATTCCGCGAGGCCATCCGCCAGTCCTCCGGCAACGACAACGAGCGCGATCAGCTGACGCGCACGT TCAACGGCTTCATTGCGGAAGGCCGTAGTCGCACGGGGTCCGCGCCGGGCAATTGCGCAGCCGCCGAGCGGCAGCTCACG GATCTGGAGAGTTCGCTCAACCCGCCGGCCGGCGCAAGCCCGGTGCCGAGGTCCGAAACGACGACCGGCGCGGCAACGAC GGGGCCTGTGCGCGGCGTGACCGATCGCGAAATCCGCTTCGGAATGGTGCTGCCGTTCTCCGGGATCCGCAAGGAGACCG GACGGCAGATGCGACAGGGCATCGAGATCGCATTCGCGCGCGCCAACGACGCGGGCGGCATCAATGGGCGCACGCTGCGG CTCGTCGCGGCTGATGACGGCTATGATCCAAGCCGGACGCTCGCGGCGATGACGCAGCTCTATGACAAGGAGCAGGTGTT CGGCTTCATCGGCAATATCGGCACGGCGAACTCCGAAGTCGCGATCCCTTACGCGCTGGAGCGCCGGACGCTGTATTTCG CTCCCAACTCCGGCGCGGCGGTCGTCCGCCGCGATCCCCCTGATCGCTACGTCTTCAACTATCGCGCCAGCTACGCCGAG GAGACGGCCGCGCTAGTGCGCTATCTCGTCAAGCTGAAGCGCATTCCGCCGAAGCAGATTGCCGTCCTCACGCAGCAGGA CGCGTTCGGCGACGACGGCTATTCCGGTGTCGCCAAGGCCTATCGTCAACTGAACATCAGCGATCCCGTGACGCGGTTCT CCTATCCGCGTGCGACCATGGACGTTGATGACGCGGTCAACCAGGTGAAGGCGCACAAGCCGGGACTGAAGGCGATCATC ATGGTGGCGACGGACCGCGCAGCCGCCAAGTTCATCGAGAAGACGCGCGATACCGTGCCGGGATTGATCTACGCCAACGT CTCCGCCGTCGGGTCGACCTCGCTTGCGACCGAGCTGAAGCTGCTCGGGCCGCGCTTCACCAACGGCGTCATCGTGACGC AAGGCGTTCCGGCCGTTTCGGGCTATTCAAGCCTCGTGCTCGACTACAAGAATGCCCTGGCGAAATATGCAGCAGGCGAG GCGCCGGACTACACATCCTTGGAAGGCTACATCGCGGCGACGATCCTGGTGCAGGCGCTGAAGCAGACCAGCCCGCTCGA CACCGAGCGACTTGTCGACACCCTGGAGTCGATGCGCAGCCTCGATCTCGGCCTCGGCACTCAGCTCGCTTTTGGACGCG CAGAGCATCAGGCATCGCACAAGATCTGGGGCACCGCGCTCGACGAGAACGGCACGTATCAGGCGATCGAACTGGAATAG
Upstream 100 bases:
>100_bases ACGGATAGATAGTACGATGACCGTTCATTGGTCCGCGTTGATCATCGGAAGCCTGTTTTCGGCTTCCATCAGCCCCGCCT TCGCGGCGGCAACCGACGCC
Downstream 100 bases:
>100_bases ACTAAAGTTTGAGGGGAAACGAACTGGTTGTAGGAGACGTCTTAGCTGGTTCTAAAGCATGATCGGAAAAAGGCGTGCCT GGTTACCGAAATGGTCATGC
Product: putative ABC-type branched-chain amino acid transport system, periplasmic component
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 479; Mature: 479
Protein sequence:
>479_residues MRELAGRVGPIVGQASACPDIAQGRVQTIVDKFREAIRQSSGNDNERDQLTRTFNGFIAEGRSRTGSAPGNCAAAERQLT DLESSLNPPAGASPVPRSETTTGAATTGPVRGVTDREIRFGMVLPFSGIRKETGRQMRQGIEIAFARANDAGGINGRTLR LVAADDGYDPSRTLAAMTQLYDKEQVFGFIGNIGTANSEVAIPYALERRTLYFAPNSGAAVVRRDPPDRYVFNYRASYAE ETAALVRYLVKLKRIPPKQIAVLTQQDAFGDDGYSGVAKAYRQLNISDPVTRFSYPRATMDVDDAVNQVKAHKPGLKAII MVATDRAAAKFIEKTRDTVPGLIYANVSAVGSTSLATELKLLGPRFTNGVIVTQGVPAVSGYSSLVLDYKNALAKYAAGE APDYTSLEGYIAATILVQALKQTSPLDTERLVDTLESMRSLDLGLGTQLAFGRAEHQASHKIWGTALDENGTYQAIELE
Sequences:
>Translated_479_residues MRELAGRVGPIVGQASACPDIAQGRVQTIVDKFREAIRQSSGNDNERDQLTRTFNGFIAEGRSRTGSAPGNCAAAERQLT DLESSLNPPAGASPVPRSETTTGAATTGPVRGVTDREIRFGMVLPFSGIRKETGRQMRQGIEIAFARANDAGGINGRTLR LVAADDGYDPSRTLAAMTQLYDKEQVFGFIGNIGTANSEVAIPYALERRTLYFAPNSGAAVVRRDPPDRYVFNYRASYAE ETAALVRYLVKLKRIPPKQIAVLTQQDAFGDDGYSGVAKAYRQLNISDPVTRFSYPRATMDVDDAVNQVKAHKPGLKAII MVATDRAAAKFIEKTRDTVPGLIYANVSAVGSTSLATELKLLGPRFTNGVIVTQGVPAVSGYSSLVLDYKNALAKYAAGE APDYTSLEGYIAATILVQALKQTSPLDTERLVDTLESMRSLDLGLGTQLAFGRAEHQASHKIWGTALDENGTYQAIELE >Mature_479_residues MRELAGRVGPIVGQASACPDIAQGRVQTIVDKFREAIRQSSGNDNERDQLTRTFNGFIAEGRSRTGSAPGNCAAAERQLT DLESSLNPPAGASPVPRSETTTGAATTGPVRGVTDREIRFGMVLPFSGIRKETGRQMRQGIEIAFARANDAGGINGRTLR LVAADDGYDPSRTLAAMTQLYDKEQVFGFIGNIGTANSEVAIPYALERRTLYFAPNSGAAVVRRDPPDRYVFNYRASYAE ETAALVRYLVKLKRIPPKQIAVLTQQDAFGDDGYSGVAKAYRQLNISDPVTRFSYPRATMDVDDAVNQVKAHKPGLKAII MVATDRAAAKFIEKTRDTVPGLIYANVSAVGSTSLATELKLLGPRFTNGVIVTQGVPAVSGYSSLVLDYKNALAKYAAGE APDYTSLEGYIAATILVQALKQTSPLDTERLVDTLESMRSLDLGLGTQLAFGRAEHQASHKIWGTALDENGTYQAIELE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 51622; Mature: 51622
Theoretical pI: Translated: 8.52; Mature: 8.52
Prosite motif: PS00228 TUBULIN_B_AUTOREG
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRELAGRVGPIVGQASACPDIAQGRVQTIVDKFREAIRQSSGNDNERDQLTRTFNGFIAE CCCHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHC GRSRTGSAPGNCAAAERQLTDLESSLNPPAGASPVPRSETTTGAATTGPVRGVTDREIRF CCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEE GMVLPFSGIRKETGRQMRQGIEIAFARANDAGGINGRTLRLVAADDGYDPSRTLAAMTQL EEEECCCHHHHHHHHHHHCCCEEEEEECCCCCCCCCCEEEEEEECCCCCHHHHHHHHHHH YDKEQVFGFIGNIGTANSEVAIPYALERRTLYFAPNSGAAVVRRDPPDRYVFNYRASYAE HHHHHHHHHHHCCCCCCCCEEEEEEECCCEEEEECCCCCEEEECCCCCCEEEEEHHHHHH ETAALVRYLVKLKRIPPKQIAVLTQQDAFGDDGYSGVAKAYRQLNISDPVTRFSYPRATM HHHHHHHHHHHHHCCCHHHEEEEECCCCCCCCCHHHHHHHHHHCCCCCCHHHCCCCCCCC DVDDAVNQVKAHKPGLKAIIMVATDRAAAKFIEKTRDTVPGLIYANVSAVGSTSLATELK CHHHHHHHHHHCCCCCEEEEEEECCHHHHHHHHHHHHCCCEEEEEEHHHCCCHHHHHHHH LLGPRFTNGVIVTQGVPAVSGYSSLVLDYKNALAKYAAGEAPDYTSLEGYIAATILVQAL HCCCCCCCCEEEECCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHH KQTSPLDTERLVDTLESMRSLDLGLGTQLAFGRAEHQASHKIWGTALDENGTYQAIELE HHCCCCCHHHHHHHHHHHHHHCCCCCCHHHHCCHHHHHCCCCCCEEECCCCCEEEEEEC >Mature Secondary Structure MRELAGRVGPIVGQASACPDIAQGRVQTIVDKFREAIRQSSGNDNERDQLTRTFNGFIAE CCCHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHC GRSRTGSAPGNCAAAERQLTDLESSLNPPAGASPVPRSETTTGAATTGPVRGVTDREIRF CCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEE GMVLPFSGIRKETGRQMRQGIEIAFARANDAGGINGRTLRLVAADDGYDPSRTLAAMTQL EEEECCCHHHHHHHHHHHCCCEEEEEECCCCCCCCCCEEEEEEECCCCCHHHHHHHHHHH YDKEQVFGFIGNIGTANSEVAIPYALERRTLYFAPNSGAAVVRRDPPDRYVFNYRASYAE HHHHHHHHHHHCCCCCCCCEEEEEEECCCEEEEECCCCCEEEECCCCCCEEEEEHHHHHH ETAALVRYLVKLKRIPPKQIAVLTQQDAFGDDGYSGVAKAYRQLNISDPVTRFSYPRATM HHHHHHHHHHHHHCCCHHHEEEEECCCCCCCCCHHHHHHHHHHCCCCCCHHHCCCCCCCC DVDDAVNQVKAHKPGLKAIIMVATDRAAAKFIEKTRDTVPGLIYANVSAVGSTSLATELK CHHHHHHHHHHCCCCCEEEEEEECCHHHHHHHHHHHHCCCEEEEEEHHHCCCHHHHHHHH LLGPRFTNGVIVTQGVPAVSGYSSLVLDYKNALAKYAAGEAPDYTSLEGYIAATILVQAL HCCCCCCCCEEEECCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHH KQTSPLDTERLVDTLESMRSLDLGLGTQLAFGRAEHQASHKIWGTALDENGTYQAIELE HHCCCCCHHHHHHHHHHHHHHCCCCCCHHHHCCHHHHHCCCCCCEEECCCCCEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA