| Definition | Bradyrhizobium sp. ORS278 chromosome, complete genome. |
|---|---|
| Accession | NC_009445 |
| Length | 7,456,587 |
Click here to switch to the map view.
The map label for this gene is eutR [H]
Identifier: 146343304
GI number: 146343304
Start: 6780037
End: 6781053
Strand: Direct
Name: eutR [H]
Synonym: BRADO6528
Alternate gene names: 146343304
Gene position: 6780037-6781053 (Clockwise)
Preceding gene: 146343301
Following gene: 146343305
Centisome position: 90.93
GC content: 67.65
Gene sequence:
>1017_bases TTGACCAGGACGCCGCCAAACCCGGCCGACCGCCCGGCCCTCGTGCAGACGCACAGCACCGACGTCGACGAGCACTGCGC GCAGCTCGGCGGCTGGCAGCTGGCCTATGACCAGATCAGCGCCGGCGCCTTCCGCGGCAGCTTCACCCAGGTCTCGCTGT CGCGGCTCGACGTGTTTCGCGAGGTCACTAGCCAGCAGGTGCGGCAGTACGGCCAGCTCGGACGGGACTGCTTCGGCCTG GCCGTGCCCTGCGGCGGCGAAGGGCCGGTTAACGTCAATGGCACAAGCATCACCCAGGATGCGCTGATCATCTCCTTCGA CGCCGATGTCGACATCTGCACGCCGCGCCGCTTCCAGCTCCGCGGCGTCACGCTGCCGACAGCGGTGATCGAGGACATCG CATGCCAGCTCGGGATCGAGCTGCCGCGCGGGCTGAAGCACCGGATGAGCGCGCTGTCGGCGTCGCCATCCTTGCTCGCG CGCTTGCGCGCCGCGCTCGCCGCCATCGATGCCGCCCTCGGCGACGGGACGCCGCTGGCCGATGACCCTGCAGGAGCCGA GGCGCTGCAGGACAGCCTGCTGCTCGAAATCGCGGACCTGCTGCCGAACCTCGCTCCTGCCAAGGACACGCGCAGTGCGG CTGACCGCAAACGCATCGTCGACCAAGCCTGTGCGATGATGCTCGCCGACGCGGAGACGCCGGTGTCGATGCTCGACATC TGCAAGGCGGTCGGCGCGAGCCGCCGCAAGCTCAGCTACTGTTTCCAGGACGTGCTCGGCACCAGTCCGATCCCCTATTG GCGCGCGGTCCGTCTCAACCGCGTCCGGCGCGACCTGAAGTCCAATCAAGATCCGCGCGACGGAATTTACGACGTGGCCG TGCGCCACGGCTTCTGGCACTTCAGTCAGTTCTCGCTCGACTACAAGCGTCATTTCGCAGAACTGCCGTCTGAAACCCTG CGCCGTGCGCGTATGGACGCCTCCATCGCGTTGAGGCACAACTCCCCTCGGCACTGA
Upstream 100 bases:
>100_bases CGTGGGTATGCTTCCGGCGCGCGCCGCCCTGGCGTGCATCTTGCAGCGCGGACCGGAGGGAATTCCGCCGTGATGTCATT GGTTTGACCAGGACGCTGAT
Downstream 100 bases:
>100_bases TCCCGGCGGCACAAGCTGTTGGACCAAAAACGGCGCGCACAAGCGCCTGACGATGCGGAGGACATGATGCTGATCCCACT CGCGGACGTGCCGCGTTGGT
Product: AraC family transcriptional regulator
Products: NA
Alternate protein names: Ethanolamine operon regulatory protein [H]
Number of amino acids: Translated: 338; Mature: 337
Protein sequence:
>338_residues MTRTPPNPADRPALVQTHSTDVDEHCAQLGGWQLAYDQISAGAFRGSFTQVSLSRLDVFREVTSQQVRQYGQLGRDCFGL AVPCGGEGPVNVNGTSITQDALIISFDADVDICTPRRFQLRGVTLPTAVIEDIACQLGIELPRGLKHRMSALSASPSLLA RLRAALAAIDAALGDGTPLADDPAGAEALQDSLLLEIADLLPNLAPAKDTRSAADRKRIVDQACAMMLADAETPVSMLDI CKAVGASRRKLSYCFQDVLGTSPIPYWRAVRLNRVRRDLKSNQDPRDGIYDVAVRHGFWHFSQFSLDYKRHFAELPSETL RRARMDASIALRHNSPRH
Sequences:
>Translated_338_residues MTRTPPNPADRPALVQTHSTDVDEHCAQLGGWQLAYDQISAGAFRGSFTQVSLSRLDVFREVTSQQVRQYGQLGRDCFGL AVPCGGEGPVNVNGTSITQDALIISFDADVDICTPRRFQLRGVTLPTAVIEDIACQLGIELPRGLKHRMSALSASPSLLA RLRAALAAIDAALGDGTPLADDPAGAEALQDSLLLEIADLLPNLAPAKDTRSAADRKRIVDQACAMMLADAETPVSMLDI CKAVGASRRKLSYCFQDVLGTSPIPYWRAVRLNRVRRDLKSNQDPRDGIYDVAVRHGFWHFSQFSLDYKRHFAELPSETL RRARMDASIALRHNSPRH >Mature_337_residues TRTPPNPADRPALVQTHSTDVDEHCAQLGGWQLAYDQISAGAFRGSFTQVSLSRLDVFREVTSQQVRQYGQLGRDCFGLA VPCGGEGPVNVNGTSITQDALIISFDADVDICTPRRFQLRGVTLPTAVIEDIACQLGIELPRGLKHRMSALSASPSLLAR LRAALAAIDAALGDGTPLADDPAGAEALQDSLLLEIADLLPNLAPAKDTRSAADRKRIVDQACAMMLADAETPVSMLDIC KAVGASRRKLSYCFQDVLGTSPIPYWRAVRLNRVRRDLKSNQDPRDGIYDVAVRHGFWHFSQFSLDYKRHFAELPSETLR RARMDASIALRHNSPRH
Specific function: Activates the transcription of the eut operon. Also positively regulates its own transcription. Probably binds ethanolamine and vitamin B12 as effectors [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 HTH araC/xylS-type DNA-binding domain [H]
Homologues:
Organism=Escherichia coli, GI1788778, Length=316, Percent_Identity=30.6962025316456, Blast_Score=141, Evalue=8e-35,
Paralogues:
None
Copy number: 10-20 Molecules/Cell [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR009057 - InterPro: IPR012287 - InterPro: IPR018062 - InterPro: IPR018060 [H]
Pfam domain/function: PF00165 HTH_AraC [H]
EC number: NA
Molecular weight: Translated: 37014; Mature: 36883
Theoretical pI: Translated: 7.48; Mature: 7.48
Prosite motif: PS00041 HTH_ARAC_FAMILY_1 ; PS01124 HTH_ARAC_FAMILY_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.4 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 2.4 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTRTPPNPADRPALVQTHSTDVDEHCAQLGGWQLAYDQISAGAFRGSFTQVSLSRLDVFR CCCCCCCCCCCCCEEEECCCCHHHHHHHHCCCEEHHHHHHHHHHCCCHHHHHHHHHHHHH EVTSQQVRQYGQLGRDCFGLAVPCGGEGPVNVNGTSITQDALIISFDADVDICTPRRFQL HHHHHHHHHHHHHCHHHHCEEECCCCCCCCCCCCCCEECCEEEEEECCCCCCCCCCCEEE RGVTLPTAVIEDIACQLGIELPRGLKHRMSALSASPSLLARLRAALAAIDAALGDGTPLA ECCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCC DDPAGAEALQDSLLLEIADLLPNLAPAKDTRSAADRKRIVDQACAMMLADAETPVSMLDI CCCCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHH CKAVGASRRKLSYCFQDVLGTSPIPYWRAVRLNRVRRDLKSNQDPRDGIYDVAVRHGFWH HHHHCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCHH FSQFSLDYKRHFAELPSETLRRARMDASIALRHNSPRH HHHHHHHHHHHHHHCCHHHHHHHHCCCCEEECCCCCCC >Mature Secondary Structure TRTPPNPADRPALVQTHSTDVDEHCAQLGGWQLAYDQISAGAFRGSFTQVSLSRLDVFR CCCCCCCCCCCCEEEECCCCHHHHHHHHCCCEEHHHHHHHHHHCCCHHHHHHHHHHHHH EVTSQQVRQYGQLGRDCFGLAVPCGGEGPVNVNGTSITQDALIISFDADVDICTPRRFQL HHHHHHHHHHHHHCHHHHCEEECCCCCCCCCCCCCCEECCEEEEEECCCCCCCCCCCEEE RGVTLPTAVIEDIACQLGIELPRGLKHRMSALSASPSLLARLRAALAAIDAALGDGTPLA ECCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCC DDPAGAEALQDSLLLEIADLLPNLAPAKDTRSAADRKRIVDQACAMMLADAETPVSMLDI CCCCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHH CKAVGASRRKLSYCFQDVLGTSPIPYWRAVRLNRVRRDLKSNQDPRDGIYDVAVRHGFWH HHHHCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCHH FSQFSLDYKRHFAELPSETLRRARMDASIALRHNSPRH HHHHHHHHHHHHHHCCHHHHHHHHCCCCEEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: DNA [C]
Specific reaction: Protein + DNA = Protein-DNA [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8300522; 9205837; 9278503 [H]