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The map label for this gene is yfiM [H]

Identifier: 146343283

GI number: 146343283

Start: 6752103

End: 6753326

Strand: Direct

Name: yfiM [H]

Synonym: BRADO6504

Alternate gene names: 146343283

Gene position: 6752103-6753326 (Clockwise)

Preceding gene: 146343282

Following gene: 146343288

Centisome position: 90.55

GC content: 69.04

Gene sequence:

>1224_bases
ATGATCTCGATCCTGCGGGTGATGCTGCTCGCCTTGATCCGCGACCGCGGCGCGCTGGTGATGGCCTTCGTGCTGCCGCC
CGCGATCTACGTGATCTTCGCCTCGATCTTCGCCGGCACCACCGGCGATCAATTGCGGCTGCGGGTCGTCGTGCTCGACA
CGGTGCAGAGCGCGGTCACGCAGCGCCTCACCGAAGCGATCCGGGCCGAGCCGACCTTCCGGCGCCCGCAGCGCACGCCT
GTGTCGCGCGAGGAGCTCGAGACCATGGTGCGGCAGGACGAGGCCGATGTCGGCATCCTGCTGCGCGCGGATCCGGCGCA
GGACATCCCCGGCGCGCCCGCGCCGATCGTGGTCATCGGCGACAGCGCCAAGGCGGTGGGAACGCCGATCGTGGCCGGCC
AGCTGCAGCGCCTGTTCGCCGAAAAGCTGCCGGACGCGGCCTATCGCAGGACCTTCGCCGATATCGAGCGCCGCTTCGTT
GCGCTCGAGCCCGAGCAGAAGGCGCGCGTCGCCGCCATTCTCGACGCGATGGGCACCCAGGCGGCGGAGGGCAGCGCGGC
TCAGGCGAGCGCAGCGCCGCTGGTCGAGCAAATGAACGTGAAATCCGCCGCCGGCGGCATCGCGGCCGCGGTTGTGTATT
ACGCCGGCGCGGTCGGCGTGATGTTCCTGATGTTCTCCTCGATCCAGAGCAGCATGGTGCTGATCGACGAGCGACAGAAC
GGCATCTTCGATCGGCTGCTGTCGGGACAGGGGCGGCTCGGGGCGCTGCTCGGCGGCAAGTTCCTGTTCCTGCTGCTGCA
GGGCGTACTGCAGGCCAGCCTGATCTTCATCGTCGCCAAGCTCGCCTATGGCGTCGATTTCACCGCGCGATGGCCGGAGT
GGAGCGGCCTGACGCTTTCGGCCTCGGCGGCGGCGGCGAGCTTCGCGCTGCTGCTCTCCGCCACCTGCCGCACCCGCGAG
CAGGCGCAGACGCTGTCGAACTTCATCGTCCTGGTGCTGTCGGCGCTCGGCGGCAGCATGGTGCCACGCTTCCTGATGCC
GCCCTGGCTGCAAAGCATCAGCGCCGTGATGCCGAATGCGTGGGTGATCGACGGCTATCACGGCCTGCTGTGGCGCGATG
CACCGCTGTCGCAGATCGAGCTGCCGATCGCCCTGCTCGCCGGTGTCGCGGTCGCGCTGTTCGGATCGGCGTGGATGGTG
CTGCGCATGCGGCAGCGGGTTTAG

Upstream 100 bases:

>100_bases
TGCTCGCCGGCGCCGCAATCACCGTGAAGGAGCTGAGAGTGCGCGATCCCGATATCGGCAGCCTGTTCCGCCAGCTCGTC
GGCCGGAGAGCCGAGCGATG

Downstream 100 bases:

>100_bases
TCACGCCTTTCCAGGGCCCGCCGCTTGATCTCCGGCAGCCGCCACCACGGCGCATCGGGATGCAGATGATGCTCGTGATG
AAAGCCGAAGTGGAAGCAGG

Product: putative ABC transporter permease

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 407; Mature: 407

Protein sequence:

>407_residues
MISILRVMLLALIRDRGALVMAFVLPPAIYVIFASIFAGTTGDQLRLRVVVLDTVQSAVTQRLTEAIRAEPTFRRPQRTP
VSREELETMVRQDEADVGILLRADPAQDIPGAPAPIVVIGDSAKAVGTPIVAGQLQRLFAEKLPDAAYRRTFADIERRFV
ALEPEQKARVAAILDAMGTQAAEGSAAQASAAPLVEQMNVKSAAGGIAAAVVYYAGAVGVMFLMFSSIQSSMVLIDERQN
GIFDRLLSGQGRLGALLGGKFLFLLLQGVLQASLIFIVAKLAYGVDFTARWPEWSGLTLSASAAAASFALLLSATCRTRE
QAQTLSNFIVLVLSALGGSMVPRFLMPPWLQSISAVMPNAWVIDGYHGLLWRDAPLSQIELPIALLAGVAVALFGSAWMV
LRMRQRV

Sequences:

>Translated_407_residues
MISILRVMLLALIRDRGALVMAFVLPPAIYVIFASIFAGTTGDQLRLRVVVLDTVQSAVTQRLTEAIRAEPTFRRPQRTP
VSREELETMVRQDEADVGILLRADPAQDIPGAPAPIVVIGDSAKAVGTPIVAGQLQRLFAEKLPDAAYRRTFADIERRFV
ALEPEQKARVAAILDAMGTQAAEGSAAQASAAPLVEQMNVKSAAGGIAAAVVYYAGAVGVMFLMFSSIQSSMVLIDERQN
GIFDRLLSGQGRLGALLGGKFLFLLLQGVLQASLIFIVAKLAYGVDFTARWPEWSGLTLSASAAAASFALLLSATCRTRE
QAQTLSNFIVLVLSALGGSMVPRFLMPPWLQSISAVMPNAWVIDGYHGLLWRDAPLSQIELPIALLAGVAVALFGSAWMV
LRMRQRV
>Mature_407_residues
MISILRVMLLALIRDRGALVMAFVLPPAIYVIFASIFAGTTGDQLRLRVVVLDTVQSAVTQRLTEAIRAEPTFRRPQRTP
VSREELETMVRQDEADVGILLRADPAQDIPGAPAPIVVIGDSAKAVGTPIVAGQLQRLFAEKLPDAAYRRTFADIERRFV
ALEPEQKARVAAILDAMGTQAAEGSAAQASAAPLVEQMNVKSAAGGIAAAVVYYAGAVGVMFLMFSSIQSSMVLIDERQN
GIFDRLLSGQGRLGALLGGKFLFLLLQGVLQASLIFIVAKLAYGVDFTARWPEWSGLTLSASAAAASFALLLSATCRTRE
QAQTLSNFIVLVLSALGGSMVPRFLMPPWLQSISAVMPNAWVIDGYHGLLWRDAPLSQIELPIALLAGVAVALFGSAWMV
LRMRQRV

Specific function: Unknown

COG id: COG0842

COG function: function code V; ABC-type multidrug transport system, permease component

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-2 domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000412
- InterPro:   IPR013525 [H]

Pfam domain/function: PF01061 ABC2_membrane [H]

EC number: NA

Molecular weight: Translated: 43745; Mature: 43745

Theoretical pI: Translated: 9.68; Mature: 9.68

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MISILRVMLLALIRDRGALVMAFVLPPAIYVIFASIFAGTTGDQLRLRVVVLDTVQSAVT
CHHHHHHHHHHHHHCCCCEEHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEEHHHHHHHHH
QRLTEAIRAEPTFRRPQRTPVSREELETMVRQDEADVGILLRADPAQDIPGAPAPIVVIG
HHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCCEEEEC
DSAKAVGTPIVAGQLQRLFAEKLPDAAYRRTFADIERRFVALEPEQKARVAAILDAMGTQ
CCCCHHCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHEEEECCHHHHHHHHHHHHHCCC
AAEGSAAQASAAPLVEQMNVKSAAGGIAAAVVYYAGAVGVMFLMFSSIQSSMVLIDERQN
CCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCC
GIFDRLLSGQGRLGALLGGKFLFLLLQGVLQASLIFIVAKLAYGVDFTARWPEWSGLTLS
HHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEECCCCCCCCEEE
ASAAAASFALLLSATCRTREQAQTLSNFIVLVLSALGGSMVPRFLMPPWLQSISAVMPNA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHCHHHCCCHHHHHHHHHCCCC
WVIDGYHGLLWRDAPLSQIELPIALLAGVAVALFGSAWMVLRMRQRV
EEEECCCCCEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MISILRVMLLALIRDRGALVMAFVLPPAIYVIFASIFAGTTGDQLRLRVVVLDTVQSAVT
CHHHHHHHHHHHHHCCCCEEHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEEHHHHHHHHH
QRLTEAIRAEPTFRRPQRTPVSREELETMVRQDEADVGILLRADPAQDIPGAPAPIVVIG
HHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCCEEEEC
DSAKAVGTPIVAGQLQRLFAEKLPDAAYRRTFADIERRFVALEPEQKARVAAILDAMGTQ
CCCCHHCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHEEEECCHHHHHHHHHHHHHCCC
AAEGSAAQASAAPLVEQMNVKSAAGGIAAAVVYYAGAVGVMFLMFSSIQSSMVLIDERQN
CCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCC
GIFDRLLSGQGRLGALLGGKFLFLLLQGVLQASLIFIVAKLAYGVDFTARWPEWSGLTLS
HHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEECCCCCCCCEEE
ASAAAASFALLLSATCRTREQAQTLSNFIVLVLSALGGSMVPRFLMPPWLQSISAVMPNA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHCHHHCCCHHHHHHHHHCCCC
WVIDGYHGLLWRDAPLSQIELPIALLAGVAVALFGSAWMVLRMRQRV
EEEECCCCCEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 8973323; 9384377 [H]