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The map label for this gene is chaC [H]

Identifier: 146343246

GI number: 146343246

Start: 6719634

End: 6720230

Strand: Direct

Name: chaC [H]

Synonym: BRADO6466

Alternate gene names: 146343246

Gene position: 6719634-6720230 (Clockwise)

Preceding gene: 146343244

Following gene: 146343251

Centisome position: 90.12

GC content: 67.0

Gene sequence:

>597_bases
ATGTCCGCAATGTCTCTCTCCTCTCGCGAACGTCCTCAAGGCGACCTCTGGGTCTTCGGCTACGGCTCGCTGATGTGGCG
CCCCGGCTTCGACTTCATCGAGCAGGTGCCGGCGCGGCTGATCGGCGAGCATCGCGCGCTGTGTGTCTACTCCTTCGTCC
ATCGCGGCACACCGGAGAAGCCGGGCCTCGTCCTCGGCTTGGATCGTGGCGGAGCGTGTCGCGGGATTGCGTTCCGCGTT
GCAGCTGACAAACGCGACGACACGATCGCGTATCTGCGCGCGCGCGAGCAGGTGACCTCGGTGTATCGCGAAGTCATACG
CGCGGTGTGGCTCGAGAACGACGCGCGCGAGCGGGTGAGCGCGCTGGTCTACGTGGTCGATCGCGGCCATGTGCAATATG
CCGGCCGGCTGTCGCTGCAGGAGCAGCTGCGCCATGTGCGCCAGGGGCACGGCCAGTCGGGCGCCAATCGCGACTACGTG
ATCTCGACCGTGAAGGCGATCGAAGCCCAGGGCTTTCGCGACACGCAGCTGCATCGGCTGGCGACGATGCTGCACGACGA
CGGCCACTCGCTGCATACGCCGGGCGACGCGGCCTAG

Upstream 100 bases:

>100_bases
TGCAGGACACCCTTTGGCCAGCAATTTTGGCGATTCCACGATCACGGATTGTGTACATAAATTAACAATTCGCGAGCACC
ACACTTAGGCTTCCGCTGTC

Downstream 100 bases:

>100_bases
CGTGCCTCAAGCCTTCACCTCTTCCGCCACGCGCCCGAACAGCTGTGCCTGCTCGGCCTGGCCCGCGCCGACGAGCCGCC
CCGTCGCCTCTTCGATGATA

Product: putative cation transport protein chaC

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 198; Mature: 197

Protein sequence:

>198_residues
MSAMSLSSRERPQGDLWVFGYGSLMWRPGFDFIEQVPARLIGEHRALCVYSFVHRGTPEKPGLVLGLDRGGACRGIAFRV
AADKRDDTIAYLRAREQVTSVYREVIRAVWLENDARERVSALVYVVDRGHVQYAGRLSLQEQLRHVRQGHGQSGANRDYV
ISTVKAIEAQGFRDTQLHRLATMLHDDGHSLHTPGDAA

Sequences:

>Translated_198_residues
MSAMSLSSRERPQGDLWVFGYGSLMWRPGFDFIEQVPARLIGEHRALCVYSFVHRGTPEKPGLVLGLDRGGACRGIAFRV
AADKRDDTIAYLRAREQVTSVYREVIRAVWLENDARERVSALVYVVDRGHVQYAGRLSLQEQLRHVRQGHGQSGANRDYV
ISTVKAIEAQGFRDTQLHRLATMLHDDGHSLHTPGDAA
>Mature_197_residues
SAMSLSSRERPQGDLWVFGYGSLMWRPGFDFIEQVPARLIGEHRALCVYSFVHRGTPEKPGLVLGLDRGGACRGIAFRVA
ADKRDDTIAYLRAREQVTSVYREVIRAVWLENDARERVSALVYVVDRGHVQYAGRLSLQEQLRHVRQGHGQSGANRDYVI
STVKAIEAQGFRDTQLHRLATMLHDDGHSLHTPGDAA

Specific function: Unknown

COG id: COG3703

COG function: function code P; Uncharacterized protein involved in cation transport

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the chaC family [H]

Homologues:

Organism=Homo sapiens, GI56790287, Length=154, Percent_Identity=29.8701298701299, Blast_Score=78, Evalue=4e-15,
Organism=Homo sapiens, GI218563698, Length=148, Percent_Identity=29.0540540540541, Blast_Score=68, Evalue=5e-12,
Organism=Escherichia coli, GI145693119, Length=173, Percent_Identity=32.9479768786127, Blast_Score=102, Evalue=2e-23,
Organism=Caenorhabditis elegans, GI17560078, Length=168, Percent_Identity=32.7380952380952, Blast_Score=68, Evalue=3e-12,
Organism=Drosophila melanogaster, GI24641578, Length=160, Percent_Identity=30, Blast_Score=79, Evalue=2e-15,
Organism=Drosophila melanogaster, GI45553467, Length=169, Percent_Identity=30.1775147928994, Blast_Score=71, Evalue=5e-13,
Organism=Drosophila melanogaster, GI24649389, Length=169, Percent_Identity=30.1775147928994, Blast_Score=71, Evalue=5e-13,
Organism=Drosophila melanogaster, GI24649391, Length=169, Percent_Identity=30.1775147928994, Blast_Score=71, Evalue=5e-13,
Organism=Drosophila melanogaster, GI24649393, Length=169, Percent_Identity=30.1775147928994, Blast_Score=71, Evalue=5e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013024
- InterPro:   IPR006840 [H]

Pfam domain/function: PF04752 ChaC [H]

EC number: NA

Molecular weight: Translated: 22224; Mature: 22093

Theoretical pI: Translated: 9.09; Mature: 9.09

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSAMSLSSRERPQGDLWVFGYGSLMWRPGFDFIEQVPARLIGEHRALCVYSFVHRGTPEK
CCCCCCCCCCCCCCCEEEEECCCEEECCCHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCC
PGLVLGLDRGGACRGIAFRVAADKRDDTIAYLRAREQVTSVYREVIRAVWLENDARERVS
CCEEEEECCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHH
ALVYVVDRGHVQYAGRLSLQEQLRHVRQGHGQSGANRDYVISTVKAIEAQGFRDTQLHRL
HHHHEEECCCEEEHHCCCHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHCCCCHHHHHHH
ATMLHDDGHSLHTPGDAA
HHHHHCCCCCCCCCCCCC
>Mature Secondary Structure 
SAMSLSSRERPQGDLWVFGYGSLMWRPGFDFIEQVPARLIGEHRALCVYSFVHRGTPEK
CCCCCCCCCCCCCCEEEEECCCEEECCCHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCC
PGLVLGLDRGGACRGIAFRVAADKRDDTIAYLRAREQVTSVYREVIRAVWLENDARERVS
CCEEEEECCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHH
ALVYVVDRGHVQYAGRLSLQEQLRHVRQGHGQSGANRDYVISTVKAIEAQGFRDTQLHRL
HHHHEEECCCEEEHHCCCHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHCCCCHHHHHHH
ATMLHDDGHSLHTPGDAA
HHHHHCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8905232; 9278503 [H]