| Definition | Bradyrhizobium sp. ORS278 chromosome, complete genome. |
|---|---|
| Accession | NC_009445 |
| Length | 7,456,587 |
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The map label for this gene is tyrC [H]
Identifier: 146343244
GI number: 146343244
Start: 6717412
End: 6718347
Strand: Direct
Name: tyrC [H]
Synonym: BRADO6464
Alternate gene names: 146343244
Gene position: 6717412-6718347 (Clockwise)
Preceding gene: 146343243
Following gene: 146343246
Centisome position: 90.09
GC content: 68.16
Gene sequence:
>936_bases GTGAGCGTCTCTGGACGGTTCGAACGCATCGCGCTGATCGGCTTCGGCCTGATCGGCGGCTCGATCGCACGTGCGGCACG TCTGCAGGGCGTGGCCGGCGAGATCGTCACGACGGCGCGCTCGGAGAAGACGCGCGCCCGCGTCGCCGAGCTCGGCATCG TTGACCATGTCGTCGCGAGCAATGCGGAAGCCGTCAGGGATGCCGATCTCGTCATCCTCTGCATTCCCGTCGGCGCCTGC GGCCCGGTCGCCGCCGAGATCGCTCCGCATCTAAAGCCGGGCGCCGTCGTCTCCGATGTCGGCTCGGTGAAGGGCGCGAT CGTCCGCGACATGGCCCCGCATCTGCCGGCGAACGTCCACTTCGTCCCGGCGCATCCGGTGGCCGGCACCGAGAACTCCG GTCCGGACTCCGGCTTCGCCGAGCTGTTCATCAACCGCTGGTGCATCCTGACGCCGCCGGAGGGCGTCAACGCCGGCGCG ATCGATCGTCTGCGCGCGTTCTGGGCGGCGCTCGGCGCCAAGGTCGAGATCATGACGCCGGATCATCACGACCGCGTGCT CGCGATCACCAGCCATCTGCCGCATCTGATCGCCTACACCATCGTCGGCACCGCCGACGAGCTGGCGCAGGTGACGGAAT CCGAGGTGATCAAGTTCTCCGCAGGCGGCTTCCGCGATTTCACCCGCATCGCGGCGTCCGATCCGACGATGTGGCGCGAC ATCTTCTTGAGCAACAAGGATGCCGTGCTCGACATGCTCGGCACCTTCACCGAGGACCTCTCGAAGCTGACGCGTGCGAT CCGGCGCGGCGACGGCGAGGCGCTGTTCGACCATTTCACGCGCACGCGCGCGATCCGCCGCGGCATCGTCGACATCGGCC AGGATTCGGCAGCGCCGGATTTCGGCCGGCCGCTGCCGCAGCTCAAGAAGCCCTGA
Upstream 100 bases:
>100_bases TGGCCAACTACAAGCTGCCGAACGCGCTGCGCCTGACCATCGGCACCGAGGAAGCCAACCGCCTGGTGGTCGAGGCGCTC AGCGAATTCATGAGGGCCAA
Downstream 100 bases:
>100_bases GTTCAGAACAGCGGAGGGACGCGGGCGACCTTGAACGGACCGAGCACCACGGCACCATCGGAGAAGCGCAAGGGAAACGT TCGCGCCTTGCGTCCCTCAA
Product: cyclohexadienyl dehydrogenase
Products: NA
Alternate protein names: Arogenate dehydrogenase; ADH; Cyclohexadienyl dehydrogenase; Prephenate dehydrogenase; PDH [H]
Number of amino acids: Translated: 311; Mature: 310
Protein sequence:
>311_residues MSVSGRFERIALIGFGLIGGSIARAARLQGVAGEIVTTARSEKTRARVAELGIVDHVVASNAEAVRDADLVILCIPVGAC GPVAAEIAPHLKPGAVVSDVGSVKGAIVRDMAPHLPANVHFVPAHPVAGTENSGPDSGFAELFINRWCILTPPEGVNAGA IDRLRAFWAALGAKVEIMTPDHHDRVLAITSHLPHLIAYTIVGTADELAQVTESEVIKFSAGGFRDFTRIAASDPTMWRD IFLSNKDAVLDMLGTFTEDLSKLTRAIRRGDGEALFDHFTRTRAIRRGIVDIGQDSAAPDFGRPLPQLKKP
Sequences:
>Translated_311_residues MSVSGRFERIALIGFGLIGGSIARAARLQGVAGEIVTTARSEKTRARVAELGIVDHVVASNAEAVRDADLVILCIPVGAC GPVAAEIAPHLKPGAVVSDVGSVKGAIVRDMAPHLPANVHFVPAHPVAGTENSGPDSGFAELFINRWCILTPPEGVNAGA IDRLRAFWAALGAKVEIMTPDHHDRVLAITSHLPHLIAYTIVGTADELAQVTESEVIKFSAGGFRDFTRIAASDPTMWRD IFLSNKDAVLDMLGTFTEDLSKLTRAIRRGDGEALFDHFTRTRAIRRGIVDIGQDSAAPDFGRPLPQLKKP >Mature_310_residues SVSGRFERIALIGFGLIGGSIARAARLQGVAGEIVTTARSEKTRARVAELGIVDHVVASNAEAVRDADLVILCIPVGACG PVAAEIAPHLKPGAVVSDVGSVKGAIVRDMAPHLPANVHFVPAHPVAGTENSGPDSGFAELFINRWCILTPPEGVNAGAI DRLRAFWAALGAKVEIMTPDHHDRVLAITSHLPHLIAYTIVGTADELAQVTESEVIKFSAGGFRDFTRIAASDPTMWRDI FLSNKDAVLDMLGTFTEDLSKLTRAIRRGDGEALFDHFTRTRAIRRGIVDIGQDSAAPDFGRPLPQLKKP
Specific function: Is competent to function as either prephenate dehydrogenase or as arogenate dehydrogenase [H]
COG id: COG0287
COG function: function code E; Prephenate dehydrogenase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 1 prephenate/arogenate dehydrogenase domain [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR008927 - InterPro: IPR016040 - InterPro: IPR003099 [H]
Pfam domain/function: PF02153 PDH [H]
EC number: =1.3.1.43; =1.3.1.12 [H]
Molecular weight: Translated: 33141; Mature: 33010
Theoretical pI: Translated: 6.86; Mature: 6.86
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSVSGRFERIALIGFGLIGGSIARAARLQGVAGEIVTTARSEKTRARVAELGIVDHVVAS CCCCCCHHEEEEEHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHC NAEAVRDADLVILCIPVGACGPVAAEIAPHLKPGAVVSDVGSVKGAIVRDMAPHLPANVH CCHHHCCCCEEEEEEECCCCCHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCEE FVPAHPVAGTENSGPDSGFAELFINRWCILTPPEGVNAGAIDRLRAFWAALGAKVEIMTP EEECCCCCCCCCCCCCCHHHHHHHCCEEEECCCCCCCCCHHHHHHHHHHHHCCEEEEECC DHHDRVLAITSHLPHLIAYTIVGTADELAQVTESEVIKFSAGGFRDFTRIAASDPTMWRD CCCCCEEEEHHHHHHHHHHHHHCCHHHHHHHHHHHEEEECCCCHHHHHHHHCCCCCHHHH IFLSNKDAVLDMLGTFTEDLSKLTRAIRRGDGEALFDHFTRTRAIRRGIVDIGQDSAAPD HHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCC FGRPLPQLKKP CCCCCCCCCCC >Mature Secondary Structure SVSGRFERIALIGFGLIGGSIARAARLQGVAGEIVTTARSEKTRARVAELGIVDHVVAS CCCCCHHEEEEEHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHC NAEAVRDADLVILCIPVGACGPVAAEIAPHLKPGAVVSDVGSVKGAIVRDMAPHLPANVH CCHHHCCCCEEEEEEECCCCCHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCEE FVPAHPVAGTENSGPDSGFAELFINRWCILTPPEGVNAGAIDRLRAFWAALGAKVEIMTP EEECCCCCCCCCCCCCCHHHHHHHCCEEEECCCCCCCCCHHHHHHHHHHHHCCEEEEECC DHHDRVLAITSHLPHLIAYTIVGTADELAQVTESEVIKFSAGGFRDFTRIAASDPTMWRD CCCCCEEEEHHHHHHHHHHHHHCCHHHHHHHHHHHEEEECCCCHHHHHHHHCCCCCHHHH IFLSNKDAVLDMLGTFTEDLSKLTRAIRRGDGEALFDHFTRTRAIRRGIVDIGQDSAAPD HHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCC FGRPLPQLKKP CCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 7916685 [H]