| Definition | Bradyrhizobium sp. ORS278 chromosome, complete genome. |
|---|---|
| Accession | NC_009445 |
| Length | 7,456,587 |
Click here to switch to the map view.
The map label for this gene is 146343143
Identifier: 146343143
GI number: 146343143
Start: 6595145
End: 6596221
Strand: Reverse
Name: 146343143
Synonym: BRADO6341
Alternate gene names: NA
Gene position: 6596221-6595145 (Counterclockwise)
Preceding gene: 146343144
Following gene: 146343142
Centisome position: 88.46
GC content: 66.67
Gene sequence:
>1077_bases ATGAAGCTCACCGAGAGCATTGAACACGGGCTGACGGCGTGGACCGCGTCGGCTGCGACTGCGATCGAGTCGGCGGCCGA CCGACAGCTCAGACGGCCGCTCGTCATCATTCGATATGATGCGCCGGACAACGTCGTCCTGACGGTGCAGGCGCCGCCGA AAGGCAAGCCGTCGCTGCCGCCAGCGACGATCAGTCTCGCAGGGCAGGATGCACGCGGCCAGCTCTCGGCCGAGTGGCTG CGCCTGCTGCGCGGCTGCGCGATGGAAGTTCGTCTGGCCGCCGCGACGGTCCTGGTGCGGCCACTCGATTTTCCCAAGCA GGCGGAGCCATTTCTCGAGGGCATGATCCGCACCCAGATCGGCAGGTTCACGCCCTGGACCCTCGATCAGGTACTTTACG GCTACAGTCCTCCGCGCGCGGCTGCGGGTGACCGGATTTCGCTCATGCTCGCGGCGACGCCGCGCGCGTTGGTCCAGCCA CTGCTGGCGTTTGCCGACGCGGCGGGCGCGGCGAAGGTCGTCGTACTTGTAGCCGACGGAGCCCCGGATGGAGTGCCAAT TCAGGTCTTCAAGGCATCACTGCGGTCGTCCCTTGCGGGTGGGCGCGATCTCGGGCGCGTTCTCAAGCTCGGCTGGATTT CGGTGGCTGCGATCACGGCCGTGATGCTGGTGGTGTCGACGCTGATCGGCGGCTATCTCGATCGTGAGATCGATGATACG CAGGCCGAGGTCGCGCGGCTGCGCGCCGCGCTGCGGCCGGTGATCGGTGCCGCTGTGGCCGCTGACGGGCTTCTTGCCAA GCGCAAACAGACCAGCCCGGCCAGCGTCATCGTTCTCGACACGCTGTCGAAGGTCCTGCCGGATGGCACCTATGTGACCG AGCTGCACATCGAGAATGATCGCCTCCAGATCTCCGGCCTCACGCAGGACGCGCCGGCGCTGATCCGTCTGATCGAGCAA TCGCCGCAGTTCAGCCGCGCTACCTTCTACGCGCCGACCACGCGGTCGGCCGGCGAAGCGGGCGAGCGCTTCCACATCGA GGCGCGGATCAACGCCTATTTTGGAGACCGGGCATGA
Upstream 100 bases:
>100_bases CGGTGATCGTCCCTGGCGGCGGCGAGCAACCCTATCGGCTGCTGGCGCGGCAGGATGAGGGACCGCAACCGAGGGGCGCG CGACAGGCGCGATGGGTGCC
Downstream 100 bases:
>100_bases GCTTCATGGCATCGCTGCGCCGGATCTTCGTCGGCACGCCGGCCGTGGCGGCGCTCATCTACGCCTTGACCACGGTTGCG TTGATCTGGCTCGGCGCATC
Product: putative general secretion pathway protein L, GspL
Products: NA
Alternate protein names: General Secretion Pathway Protein L GspL; General Secretion Pathway Protein L; Fimbrial Assembly
Number of amino acids: Translated: 358; Mature: 358
Protein sequence:
>358_residues MKLTESIEHGLTAWTASAATAIESAADRQLRRPLVIIRYDAPDNVVLTVQAPPKGKPSLPPATISLAGQDARGQLSAEWL RLLRGCAMEVRLAAATVLVRPLDFPKQAEPFLEGMIRTQIGRFTPWTLDQVLYGYSPPRAAAGDRISLMLAATPRALVQP LLAFADAAGAAKVVVLVADGAPDGVPIQVFKASLRSSLAGGRDLGRVLKLGWISVAAITAVMLVVSTLIGGYLDREIDDT QAEVARLRAALRPVIGAAVAADGLLAKRKQTSPASVIVLDTLSKVLPDGTYVTELHIENDRLQISGLTQDAPALIRLIEQ SPQFSRATFYAPTTRSAGEAGERFHIEARINAYFGDRA
Sequences:
>Translated_358_residues MKLTESIEHGLTAWTASAATAIESAADRQLRRPLVIIRYDAPDNVVLTVQAPPKGKPSLPPATISLAGQDARGQLSAEWL RLLRGCAMEVRLAAATVLVRPLDFPKQAEPFLEGMIRTQIGRFTPWTLDQVLYGYSPPRAAAGDRISLMLAATPRALVQP LLAFADAAGAAKVVVLVADGAPDGVPIQVFKASLRSSLAGGRDLGRVLKLGWISVAAITAVMLVVSTLIGGYLDREIDDT QAEVARLRAALRPVIGAAVAADGLLAKRKQTSPASVIVLDTLSKVLPDGTYVTELHIENDRLQISGLTQDAPALIRLIEQ SPQFSRATFYAPTTRSAGEAGERFHIEARINAYFGDRA >Mature_358_residues MKLTESIEHGLTAWTASAATAIESAADRQLRRPLVIIRYDAPDNVVLTVQAPPKGKPSLPPATISLAGQDARGQLSAEWL RLLRGCAMEVRLAAATVLVRPLDFPKQAEPFLEGMIRTQIGRFTPWTLDQVLYGYSPPRAAAGDRISLMLAATPRALVQP LLAFADAAGAAKVVVLVADGAPDGVPIQVFKASLRSSLAGGRDLGRVLKLGWISVAAITAVMLVVSTLIGGYLDREIDDT QAEVARLRAALRPVIGAAVAADGLLAKRKQTSPASVIVLDTLSKVLPDGTYVTELHIENDRLQISGLTQDAPALIRLIEQ SPQFSRATFYAPTTRSAGEAGERFHIEARINAYFGDRA
Specific function: Unknown
COG id: COG3166
COG function: function code NU; Tfp pilus assembly protein PilN
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 38240; Mature: 38240
Theoretical pI: Translated: 9.57; Mature: 9.57
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 1.7 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 1.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKLTESIEHGLTAWTASAATAIESAADRQLRRPLVIIRYDAPDNVVLTVQAPPKGKPSLP CCCHHHHHHCHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCEEEEEECCCCCCCCCC PATISLAGQDARGQLSAEWLRLLRGCAMEVRLAAATVLVRPLDFPKQAEPFLEGMIRTQI CCEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCCCCHHHHHHHHHHH GRFTPWTLDQVLYGYSPPRAAAGDRISLMLAATPRALVQPLLAFADAAGAAKVVVLVADG CCCCCCCHHHHHHCCCCCCCCCCCCEEEEEECCCHHHHHHHHHHHCCCCCEEEEEEEECC APDGVPIQVFKASLRSSLAGGRDLGRVLKLGWISVAAITAVMLVVSTLIGGYLDREIDDT CCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHH QAEVARLRAALRPVIGAAVAADGLLAKRKQTSPASVIVLDTLSKVLPDGTYVTELHIEND HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEHHHHHHHHCCCCCEEEEEEEECC RLQISGLTQDAPALIRLIEQSPQFSRATFYAPTTRSAGEAGERFHIEARINAYFGDRA EEEEECCCCCHHHHHHHHHCCCCCCCEEEECCCCCCCCCCCCEEEEEEEEEEECCCCC >Mature Secondary Structure MKLTESIEHGLTAWTASAATAIESAADRQLRRPLVIIRYDAPDNVVLTVQAPPKGKPSLP CCCHHHHHHCHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCEEEEEECCCCCCCCCC PATISLAGQDARGQLSAEWLRLLRGCAMEVRLAAATVLVRPLDFPKQAEPFLEGMIRTQI CCEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCCCCHHHHHHHHHHH GRFTPWTLDQVLYGYSPPRAAAGDRISLMLAATPRALVQPLLAFADAAGAAKVVVLVADG CCCCCCCHHHHHHCCCCCCCCCCCCEEEEEECCCHHHHHHHHHHHCCCCCEEEEEEEECC APDGVPIQVFKASLRSSLAGGRDLGRVLKLGWISVAAITAVMLVVSTLIGGYLDREIDDT CCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHH QAEVARLRAALRPVIGAAVAADGLLAKRKQTSPASVIVLDTLSKVLPDGTYVTELHIEND HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEHHHHHHHHCCCCCEEEEEEEECC RLQISGLTQDAPALIRLIEQSPQFSRATFYAPTTRSAGEAGERFHIEARINAYFGDRA EEEEECCCCCHHHHHHHHHCCCCCCCEEEECCCCCCCCCCCCEEEEEEEEEEECCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA