| Definition | Bradyrhizobium sp. ORS278 chromosome, complete genome. |
|---|---|
| Accession | NC_009445 |
| Length | 7,456,587 |
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The map label for this gene is 146343142
Identifier: 146343142
GI number: 146343142
Start: 6594591
End: 6595148
Strand: Reverse
Name: 146343142
Synonym: BRADO6340
Alternate gene names: NA
Gene position: 6595148-6594591 (Counterclockwise)
Preceding gene: 146343143
Following gene: 146343141
Centisome position: 88.45
GC content: 67.74
Gene sequence:
>558_bases ATGAGCTTCATGGCATCGCTGCGCCGGATCTTCGTCGGCACGCCGGCCGTGGCGGCGCTCATCTACGCCTTGACCACGGT TGCGTTGATCTGGCTCGGCGCATCGGCCGTGATCGATCTCGCGGCGAAACGTGACCAGCTCGGCGATAGCAGCGCGCAAC TGGCGCAGTTCTCGGGGCGCAAGCGGCCGGGTGCAGCGGGTGGCAGTCTCGCGACGCCGGGAGGATCCGTCTTCGTCGAA GGCCGGACGGTGACGATTGCGGGCGCGACGCTGGTCCAGCGTCTCACCGAGGCGGTCGCCAAGGTCGGCGGCAATGTGTT GTCGACCCAGGTCGATCTGCCCGCGGCGCGCGCGACGAGCAACATGATCAGCGTGGTCGCCAGTTGCGAGCTCGAGCAGC CGGCCCTGCAGCAGCTGCTCTATGATCTCGAGGCCGGGCTGCCGTTCCTGTTCGTCGATCAGCTTCATGTGCAGCAGTCG CTGGCGGAGGCGGCGAGCGGGGCAGGGCGGCTGCGCGTGCTGGTCACCGTGTCGGGACAATGGCAAGGACAGATGTGA
Upstream 100 bases:
>100_bases GCCGCGCTACCTTCTACGCGCCGACCACGCGGTCGGCCGGCGAAGCGGGCGAGCGCTTCCACATCGAGGCGCGGATCAAC GCCTATTTTGGAGACCGGGC
Downstream 100 bases:
>100_bases TGCGGTCATTCGTCGGATCACGCCTCGTGGCGCTGGTGCTCGCCTCCGTTCTCGGCAGCTCCGTCGACCTCGCCTGGTCG GAGGACGGCGATGCGCCCGA
Product: putative general secretion pathway protein M, GspM
Products: NA
Alternate protein names: General Secretion Pathway Protein M GspM
Number of amino acids: Translated: 185; Mature: 184
Protein sequence:
>185_residues MSFMASLRRIFVGTPAVAALIYALTTVALIWLGASAVIDLAAKRDQLGDSSAQLAQFSGRKRPGAAGGSLATPGGSVFVE GRTVTIAGATLVQRLTEAVAKVGGNVLSTQVDLPAARATSNMISVVASCELEQPALQQLLYDLEAGLPFLFVDQLHVQQS LAEAASGAGRLRVLVTVSGQWQGQM
Sequences:
>Translated_185_residues MSFMASLRRIFVGTPAVAALIYALTTVALIWLGASAVIDLAAKRDQLGDSSAQLAQFSGRKRPGAAGGSLATPGGSVFVE GRTVTIAGATLVQRLTEAVAKVGGNVLSTQVDLPAARATSNMISVVASCELEQPALQQLLYDLEAGLPFLFVDQLHVQQS LAEAASGAGRLRVLVTVSGQWQGQM >Mature_184_residues SFMASLRRIFVGTPAVAALIYALTTVALIWLGASAVIDLAAKRDQLGDSSAQLAQFSGRKRPGAAGGSLATPGGSVFVEG RTVTIAGATLVQRLTEAVAKVGGNVLSTQVDLPAARATSNMISVVASCELEQPALQQLLYDLEAGLPFLFVDQLHVQQSL AEAASGAGRLRVLVTVSGQWQGQM
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19166; Mature: 19035
Theoretical pI: Translated: 8.50; Mature: 8.50
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSFMASLRRIFVGTPAVAALIYALTTVALIWLGASAVIDLAAKRDQLGDSSAQLAQFSGR CCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCC KRPGAAGGSLATPGGSVFVEGRTVTIAGATLVQRLTEAVAKVGGNVLSTQVDLPAARATS CCCCCCCCCCCCCCCCEEECCCEEEEHHHHHHHHHHHHHHHHCCCEEEEECCCCHHHHHH NMISVVASCELEQPALQQLLYDLEAGLPFLFVDQLHVQQSLAEAASGAGRLRVLVTVSGQ HHHHHHHHCCCCHHHHHHHHHHHHCCCCEEHHHHHHHHHHHHHHHCCCCEEEEEEEECCC WQGQM CCCCC >Mature Secondary Structure SFMASLRRIFVGTPAVAALIYALTTVALIWLGASAVIDLAAKRDQLGDSSAQLAQFSGR CHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCC KRPGAAGGSLATPGGSVFVEGRTVTIAGATLVQRLTEAVAKVGGNVLSTQVDLPAARATS CCCCCCCCCCCCCCCCEEECCCEEEEHHHHHHHHHHHHHHHHCCCEEEEECCCCHHHHHH NMISVVASCELEQPALQQLLYDLEAGLPFLFVDQLHVQQSLAEAASGAGRLRVLVTVSGQ HHHHHHHHCCCCHHHHHHHHHHHHCCCCEEHHHHHHHHHHHHHHHCCCCEEEEEEEECCC WQGQM CCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA