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The map label for this gene is ymaE [H]

Identifier: 146343123

GI number: 146343123

Start: 6572961

End: 6573764

Strand: Direct

Name: ymaE [H]

Synonym: BRADO6320

Alternate gene names: 146343123

Gene position: 6572961-6573764 (Clockwise)

Preceding gene: 146343115

Following gene: 146343124

Centisome position: 88.15

GC content: 65.92

Gene sequence:

>804_bases
ATGCCTCTCTGGACCTGCTTTCAATGCGGCGCGCAGTTTCCCGACACGCCCGCGCCGCCTGCCCATTGCGTCGTCTGCGA
GGACGAGCGGCAATATGTGAACTGGAGCGGCCAGCGCTTTCTCAGCCGCGAGGAACTGGCGGAGCGGCATCCGGTGGTCT
GGCGCGAGGATCTCGGCCTTATTGGTCTCGCGCTCGAGCCCTCCTTCGCAATCGGTCAGCGCGCGCTGCTGATTCCCGTG
CCGGACGGCTGCGTGATGTGGGATTGCATCCCCTTGGCGACGGAGGCAGCGATTGCTCATGTCCGCGCGCTCGGCGGGCT
CAAGGCGATCTCCGTGTCACATCCTCATTACTATGGCGCGGTGGCCGATTGGAGCGCGGCCTTCGGCGACGCTCCGATCT
ATCTGCATGGCGATGACGCCGCCTTCGTCACCCGGCCGCATTCCGCCGTCGTGCCCTGGAGCGGCGATCGTCTCGCCATT
TCGGACGACGTTGTGCTGCTGCGGACCGGCGGACATTTCGCCGGCGCGACCATCCTGCACTGGCGCAAGGGCGTCGACGG
CAAGGGCGCGCTGTTCACCGGTGATATCGCGATGGTCGCCATGGACCGCCGCCATGTCAGCTTCATGTATTCCTATCCGA
ACTACATCCCGCTCGGCTCCGCCGCGGTGCGCCGCATCGCCGATGTCGTCGCGCCGCTGGCGTTCGATCGCATCTACGGC
GCGTGGTGGCAGAAGAACATCGCCGAGGATGCGAAGCGCGCATTCGACCGCTCCGTGACGCGCTATCTCGCCGCCATCGC
ATAA

Upstream 100 bases:

>100_bases
TGCCACCCTAGGCGATCACGACGCTCTGCGCGACGCTGCCGCCAGCCGCACGGCGTGTTATCGTCCAGCCTTGTCGTCTC
GTGAATTCACCCGGTGCCCC

Downstream 100 bases:

>100_bases
GCTCGACGGGCCGTTGCATGTCCTCCCGGTGGTAACGCTGTCGCTGAGCCGCGCGCAGCGTCGAGTCCGGCTCTTGACCC
TCATGGTAAGGAGCGTCGCC

Product: putative hydrolase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 267; Mature: 266

Protein sequence:

>267_residues
MPLWTCFQCGAQFPDTPAPPAHCVVCEDERQYVNWSGQRFLSREELAERHPVVWREDLGLIGLALEPSFAIGQRALLIPV
PDGCVMWDCIPLATEAAIAHVRALGGLKAISVSHPHYYGAVADWSAAFGDAPIYLHGDDAAFVTRPHSAVVPWSGDRLAI
SDDVVLLRTGGHFAGATILHWRKGVDGKGALFTGDIAMVAMDRRHVSFMYSYPNYIPLGSAAVRRIADVVAPLAFDRIYG
AWWQKNIAEDAKRAFDRSVTRYLAAIA

Sequences:

>Translated_267_residues
MPLWTCFQCGAQFPDTPAPPAHCVVCEDERQYVNWSGQRFLSREELAERHPVVWREDLGLIGLALEPSFAIGQRALLIPV
PDGCVMWDCIPLATEAAIAHVRALGGLKAISVSHPHYYGAVADWSAAFGDAPIYLHGDDAAFVTRPHSAVVPWSGDRLAI
SDDVVLLRTGGHFAGATILHWRKGVDGKGALFTGDIAMVAMDRRHVSFMYSYPNYIPLGSAAVRRIADVVAPLAFDRIYG
AWWQKNIAEDAKRAFDRSVTRYLAAIA
>Mature_266_residues
PLWTCFQCGAQFPDTPAPPAHCVVCEDERQYVNWSGQRFLSREELAERHPVVWREDLGLIGLALEPSFAIGQRALLIPVP
DGCVMWDCIPLATEAAIAHVRALGGLKAISVSHPHYYGAVADWSAAFGDAPIYLHGDDAAFVTRPHSAVVPWSGDRLAIS
DDVVLLRTGGHFAGATILHWRKGVDGKGALFTGDIAMVAMDRRHVSFMYSYPNYIPLGSAAVRRIADVVAPLAFDRIYGA
WWQKNIAEDAKRAFDRSVTRYLAAIA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001279 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 29313; Mature: 29182

Theoretical pI: Translated: 6.67; Mature: 6.67

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.2 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
2.3 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPLWTCFQCGAQFPDTPAPPAHCVVCEDERQYVNWSGQRFLSREELAERHPVVWREDLGL
CCCCHHHHCCCCCCCCCCCCCEEEEECCCCCEECCCCHHHHCHHHHHHHCCCEEECCCCE
IGLALEPSFAIGQRALLIPVPDGCVMWDCIPLATEAAIAHVRALGGLKAISVSHPHYYGA
EEEEECCCHHCCCEEEEEECCCCCEEEEEHHHHHHHHHHHHHHHCCEEEEEECCCCEECC
VADWSAAFGDAPIYLHGDDAAFVTRPHSAVVPWSGDRLAISDDVVLLRTGGHFAGATILH
CCCCHHHCCCCCEEEECCCEEEEECCCCEECCCCCCEEEEECCEEEEEECCCCCCEEEEE
WRKGVDGKGALFTGDIAMVAMDRRHVSFMYSYPNYIPLGSAAVRRIADVVAPLAFDRIYG
ECCCCCCCCCEEECCEEEEEECCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHH
AWWQKNIAEDAKRAFDRSVTRYLAAIA
HHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
PLWTCFQCGAQFPDTPAPPAHCVVCEDERQYVNWSGQRFLSREELAERHPVVWREDLGL
CCCHHHHCCCCCCCCCCCCCEEEEECCCCCEECCCCHHHHCHHHHHHHCCCEEECCCCE
IGLALEPSFAIGQRALLIPVPDGCVMWDCIPLATEAAIAHVRALGGLKAISVSHPHYYGA
EEEEECCCHHCCCEEEEEECCCCCEEEEEHHHHHHHHHHHHHHHCCEEEEEECCCCEECC
VADWSAAFGDAPIYLHGDDAAFVTRPHSAVVPWSGDRLAISDDVVLLRTGGHFAGATILH
CCCCHHHCCCCCEEEECCCEEEEECCCCEECCCCCCEEEEECCEEEEEECCCCCCEEEEE
WRKGVDGKGALFTGDIAMVAMDRRHVSFMYSYPNYIPLGSAAVRRIADVVAPLAFDRIYG
ECCCCCCCCCEEECCEEEEEECCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHH
AWWQKNIAEDAKRAFDRSVTRYLAAIA
HHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]