| Definition | Bradyrhizobium sp. ORS278 chromosome, complete genome. |
|---|---|
| Accession | NC_009445 |
| Length | 7,456,587 |
Click here to switch to the map view.
The map label for this gene is 146343115
Identifier: 146343115
GI number: 146343115
Start: 6560349
End: 6562214
Strand: Direct
Name: 146343115
Synonym: BRADO6312
Alternate gene names: NA
Gene position: 6560349-6562214 (Clockwise)
Preceding gene: 146343114
Following gene: 146343123
Centisome position: 87.98
GC content: 66.99
Gene sequence:
>1866_bases TTGGAACGGGCAGGACGACAGGCAGGGAGTCTCGGACGTCGCATCGGTCGCGATGTCTTGCGGCACCAGGAGGAGTCGGT TGCCCTGACCGTGCTGCTCGTGACGCTGTTCGGGGCCGTACCGTCGCATGGCCAGACCGTCACCCAGGGCACGCAAGCGC GGGCCTACGCAGATCCCGCGACGGTTGAAGGCGGCGGGCCGGTTGTCGTCGTGCCGAATCGCCGTCGCCAGCCGGTCCGG CCGGCCGGCGGCAATGGGCCGGTCGTGATTCCGCAAGTCATCCTGGCACCGGGCGGCACTGAGCCCGAGCCGAAAGAACC GGCGCAAGTCGATGAGCGTCCGCCGCCGCGGCCGCGATCGCCCATCGATGCCGGAGCTGGCGCATTGCCTCAAGCCGCCC GTCGTGAGCCGGCGCCGCGTCTGGCTCCGGTGCGCAACGGCTTCTTCGGCGCGCCGTCCGCCGGGCTGCTCGTCGGAGGC TGCCTGTCGACGCCAGGCCGGCTGTCGATGACCAATGTTCCCAACCGCTGTCTCGACGCGCTCGCCTTCGCCGTCAGTCC GCCGCCGGCGACGCGCGGCGTGCTACCGAACAATCTGCCGCCGATCCCGCGCCAGGATGCGCAGCCGATTCCGCCGGTTC TCGCCGACAAGCCGAAGATGCGGCTGCCGCCCGTGAACAAGGGGCAGAAGCCACAGGAGCAACAGCCTCAGACGCCGCCG ATGATGGAGGAGGATCCGTACGAGCCCAAGGGCATCACGGTGGGAAACTTCATCCTGAAGCCTGCGTTCGAAATGTCCTC CGGCTTCGACAGCAATCCCGGGCGTGTGCCGAAAGGCGCGGGCTCCGGATTCGTCAGCGTTGCGCCGGTTCTGCTGGTAC GCTCTCAGTTCGAGCGGCATCTGCTCAACGCCGATGTGCGCGTCGGCTATATCGACTATGCCAAGCTCCGGCAGCTCTCG AGGCCCACCGTCGACGCGAAGGTGAATGGTCGCTACGACATCACCGATACGTTTGCGCTCAACGGCGAGGGCCACGTTGC CGTCGATGCCGATGATCCCGGTACGCCGCGCTTCACCGGCCGGTTCGCCAAGATTCCGCTGGCTTCCACCGTCGGCGGCT CGGCCGGCGTCACCAAGCGGTTCGACGATTTCGAGGTCTCGACCAAGGCTGCCATCGACCGCGTGGCGTTCCAGAACGCG CCGCTCGTCGACGGCCAGATCGTCAGCAACGCGGACCGCAACTTCGTTCAGTACGGCTCGCAGAGCCGTGTCACCTATAA TCTGACGCCGGAGATCCGTCCCTTCGTCGATGTCGCCGTCGATCGCCGCGTTCACGACATCGCGGTCGATGCCGAGGGCT TCCGCCGCGACTCCACCGGCACCGCGGTCGAGGCCGGCGTGACCCTCGGTTACACCGACAAGCTGACCGGTGACGTCGCC GTCGGCTATCTCACCCGCCGGTTTCAGGACCCCGCGCTCAAGCCGGTCAACGGCTTCATCGCCGATGCCAATCTCACTTG GCAATATGCCAAGGAGACCGCGATCATGCTGGCCGCGAAGTCGCAGGTGGTCGAGAGCACCGAGGTCGGCATCTCCGGCG TGCTCAAGCGCGACCTCACGGTCGGCGTCGAGCATCAGTTCGAACCGTGGCTGGTCGGCACCCTCCTTGCCGGCTACGGC CAGGACGCGTTCACCGGCACGACGCGGGTCGACGACCGCTATCTCGTCGAGCTCGGCATGCTCTACAAATTCTCCCGCCT GCTGCAGTTCAGGGCCAGCGTCCGGCGCGAGGAGACGCGCTCGAACTTCAAAGAGAACAACCTCTCCGCAACCGTGGTGC AGGTCGGGGCTCGGGTGCAGTACTAG
Upstream 100 bases:
>100_bases CTGGTGGTCGAGTGAGCTGATGTCCGGTCCTTGGCGGCGTGGACGGCGCCGCCGGGGCCTCATTCCGGCATGCTGCCGAA CGCGACGGAGACCGTGATTT
Downstream 100 bases:
>100_bases ACGGCGCCCCCTTCGATCGGCCATCGGGCGGCGAGTCGAGGTCTCGCCTCCTCCACCGCTGTCATGCTCCGCGAAAGCGG GGCTCCAGTACTCCGTGGCA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 621; Mature: 621
Protein sequence:
>621_residues MERAGRQAGSLGRRIGRDVLRHQEESVALTVLLVTLFGAVPSHGQTVTQGTQARAYADPATVEGGGPVVVVPNRRRQPVR PAGGNGPVVIPQVILAPGGTEPEPKEPAQVDERPPPRPRSPIDAGAGALPQAARREPAPRLAPVRNGFFGAPSAGLLVGG CLSTPGRLSMTNVPNRCLDALAFAVSPPPATRGVLPNNLPPIPRQDAQPIPPVLADKPKMRLPPVNKGQKPQEQQPQTPP MMEEDPYEPKGITVGNFILKPAFEMSSGFDSNPGRVPKGAGSGFVSVAPVLLVRSQFERHLLNADVRVGYIDYAKLRQLS RPTVDAKVNGRYDITDTFALNGEGHVAVDADDPGTPRFTGRFAKIPLASTVGGSAGVTKRFDDFEVSTKAAIDRVAFQNA PLVDGQIVSNADRNFVQYGSQSRVTYNLTPEIRPFVDVAVDRRVHDIAVDAEGFRRDSTGTAVEAGVTLGYTDKLTGDVA VGYLTRRFQDPALKPVNGFIADANLTWQYAKETAIMLAAKSQVVESTEVGISGVLKRDLTVGVEHQFEPWLVGTLLAGYG QDAFTGTTRVDDRYLVELGMLYKFSRLLQFRASVRREETRSNFKENNLSATVVQVGARVQY
Sequences:
>Translated_621_residues MERAGRQAGSLGRRIGRDVLRHQEESVALTVLLVTLFGAVPSHGQTVTQGTQARAYADPATVEGGGPVVVVPNRRRQPVR PAGGNGPVVIPQVILAPGGTEPEPKEPAQVDERPPPRPRSPIDAGAGALPQAARREPAPRLAPVRNGFFGAPSAGLLVGG CLSTPGRLSMTNVPNRCLDALAFAVSPPPATRGVLPNNLPPIPRQDAQPIPPVLADKPKMRLPPVNKGQKPQEQQPQTPP MMEEDPYEPKGITVGNFILKPAFEMSSGFDSNPGRVPKGAGSGFVSVAPVLLVRSQFERHLLNADVRVGYIDYAKLRQLS RPTVDAKVNGRYDITDTFALNGEGHVAVDADDPGTPRFTGRFAKIPLASTVGGSAGVTKRFDDFEVSTKAAIDRVAFQNA PLVDGQIVSNADRNFVQYGSQSRVTYNLTPEIRPFVDVAVDRRVHDIAVDAEGFRRDSTGTAVEAGVTLGYTDKLTGDVA VGYLTRRFQDPALKPVNGFIADANLTWQYAKETAIMLAAKSQVVESTEVGISGVLKRDLTVGVEHQFEPWLVGTLLAGYG QDAFTGTTRVDDRYLVELGMLYKFSRLLQFRASVRREETRSNFKENNLSATVVQVGARVQY >Mature_621_residues MERAGRQAGSLGRRIGRDVLRHQEESVALTVLLVTLFGAVPSHGQTVTQGTQARAYADPATVEGGGPVVVVPNRRRQPVR PAGGNGPVVIPQVILAPGGTEPEPKEPAQVDERPPPRPRSPIDAGAGALPQAARREPAPRLAPVRNGFFGAPSAGLLVGG CLSTPGRLSMTNVPNRCLDALAFAVSPPPATRGVLPNNLPPIPRQDAQPIPPVLADKPKMRLPPVNKGQKPQEQQPQTPP MMEEDPYEPKGITVGNFILKPAFEMSSGFDSNPGRVPKGAGSGFVSVAPVLLVRSQFERHLLNADVRVGYIDYAKLRQLS RPTVDAKVNGRYDITDTFALNGEGHVAVDADDPGTPRFTGRFAKIPLASTVGGSAGVTKRFDDFEVSTKAAIDRVAFQNA PLVDGQIVSNADRNFVQYGSQSRVTYNLTPEIRPFVDVAVDRRVHDIAVDAEGFRRDSTGTAVEAGVTLGYTDKLTGDVA VGYLTRRFQDPALKPVNGFIADANLTWQYAKETAIMLAAKSQVVESTEVGISGVLKRDLTVGVEHQFEPWLVGTLLAGYG QDAFTGTTRVDDRYLVELGMLYKFSRLLQFRASVRREETRSNFKENNLSATVVQVGARVQY
Specific function: Unknown
COG id: COG5338
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 66848; Mature: 66848
Theoretical pI: Translated: 9.67; Mature: 9.67
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 1.6 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 1.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MERAGRQAGSLGRRIGRDVLRHQEESVALTVLLVTLFGAVPSHGQTVTQGTQARAYADPA CCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCCEECCCCCCEECCCCC TVEGGGPVVVVPNRRRQPVRPAGGNGPVVIPQVILAPGGTEPEPKEPAQVDERPPPRPRS EECCCCCEEECCCCCCCCCCCCCCCCCEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCC PIDAGAGALPQAARREPAPRLAPVRNGFFGAPSAGLLVGGCLSTPGRLSMTNVPNRCLDA CCCCCCCCCCHHHHCCCCCCCCHHCCCCCCCCCCCEEEEHHCCCCCCEEECCCCHHHHHH LAFAVSPPPATRGVLPNNLPPIPRQDAQPIPPVLADKPKMRLPPVNKGQKPQEQQPQTPP HHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHCCCCCCCCCCCCCCCCCCCCCCCCCC MMEEDPYEPKGITVGNFILKPAFEMSSGFDSNPGRVPKGAGSGFVSVAPVLLVRSQFERH CCCCCCCCCCCEEECHHHHCCCHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHH LLNADVRVGYIDYAKLRQLSRPTVDAKVNGRYDITDTFALNGEGHVAVDADDPGTPRFTG HHCCCEEEEEECHHHHHHHCCCCCCEEECCEEECEEEEEECCCCEEEECCCCCCCCCCCC RFAKIPLASTVGGSAGVTKRFDDFEVSTKAAIDRVAFQNAPLVDGQIVSNADRNFVQYGS CEEECCCHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCHHHCCCCCHHHHCCC QSRVTYNLTPEIRPFVDVAVDRRVHDIAVDAEGFRRDSTGTAVEAGVTLGYTDKLTGDVA CCCEEEECCCCCCHHHHHHHHCCEEEEEECCCCCCCCCCCCEEECCEEECCCCCCCCHHH VGYLTRRFQDPALKPVNGFIADANLTWQYAKETAIMLAAKSQVVESTEVGISGVLKRDLT HHHHHHHHCCCCCCCCCCEEECCCCEEEEHHCEEEEEEHHHHHHHHHHCCHHHHHHHCCE VGVEHQFEPWLVGTLLAGYGQDAFTGTTRVDDRYLVELGMLYKFSRLLQFRASVRREETR ECCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH SNFKENNLSATVVQVGARVQY HHHHHCCCEEEEEEECCCCCC >Mature Secondary Structure MERAGRQAGSLGRRIGRDVLRHQEESVALTVLLVTLFGAVPSHGQTVTQGTQARAYADPA CCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCCEECCCCCCEECCCCC TVEGGGPVVVVPNRRRQPVRPAGGNGPVVIPQVILAPGGTEPEPKEPAQVDERPPPRPRS EECCCCCEEECCCCCCCCCCCCCCCCCEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCC PIDAGAGALPQAARREPAPRLAPVRNGFFGAPSAGLLVGGCLSTPGRLSMTNVPNRCLDA CCCCCCCCCCHHHHCCCCCCCCHHCCCCCCCCCCCEEEEHHCCCCCCEEECCCCHHHHHH LAFAVSPPPATRGVLPNNLPPIPRQDAQPIPPVLADKPKMRLPPVNKGQKPQEQQPQTPP HHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHCCCCCCCCCCCCCCCCCCCCCCCCCC MMEEDPYEPKGITVGNFILKPAFEMSSGFDSNPGRVPKGAGSGFVSVAPVLLVRSQFERH CCCCCCCCCCCEEECHHHHCCCHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHH LLNADVRVGYIDYAKLRQLSRPTVDAKVNGRYDITDTFALNGEGHVAVDADDPGTPRFTG HHCCCEEEEEECHHHHHHHCCCCCCEEECCEEECEEEEEECCCCEEEECCCCCCCCCCCC RFAKIPLASTVGGSAGVTKRFDDFEVSTKAAIDRVAFQNAPLVDGQIVSNADRNFVQYGS CEEECCCHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCHHHCCCCCHHHHCCC QSRVTYNLTPEIRPFVDVAVDRRVHDIAVDAEGFRRDSTGTAVEAGVTLGYTDKLTGDVA CCCEEEECCCCCCHHHHHHHHCCEEEEEECCCCCCCCCCCCEEECCEEECCCCCCCCHHH VGYLTRRFQDPALKPVNGFIADANLTWQYAKETAIMLAAKSQVVESTEVGISGVLKRDLT HHHHHHHHCCCCCCCCCCEEECCCCEEEEHHCEEEEEEHHHHHHHHHHCCHHHHHHHCCE VGVEHQFEPWLVGTLLAGYGQDAFTGTTRVDDRYLVELGMLYKFSRLLQFRASVRREETR ECCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH SNFKENNLSATVVQVGARVQY HHHHHCCCEEEEEEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA