| Definition | Bradyrhizobium sp. ORS278 chromosome, complete genome. |
|---|---|
| Accession | NC_009445 |
| Length | 7,456,587 |
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The map label for this gene is livJ [C]
Identifier: 146342684
GI number: 146342684
Start: 6068155
End: 6069327
Strand: Reverse
Name: livJ [C]
Synonym: BRADO5851
Alternate gene names: 146342684
Gene position: 6069327-6068155 (Counterclockwise)
Preceding gene: 146342685
Following gene: 146342683
Centisome position: 81.4
GC content: 64.19
Gene sequence:
>1173_bases ATGAAGAAGCTCATCGCGGCCGCGCTCGCGGCCGGCCTGCTCACATCGGCGGGCGCGGCCCGCGCGGCCGACATCACCGT CTGCATCTGGGGCACGATCACCGGGCCGGACGCACTCGTGAACGGCATGAGCTATGGCCCGCGCGACTATTTCGAGTTCC TCAACCAGACCAAGGGCGGCATCGCCGGCAACAAGGTGAAACTGCTGCTGCTCGACGGCCGCTACAAGCTCGACGAGGAG CTGAAGATCTACCGCCGCTGCGTCGACCAGGAGCAGGCGGTGTACGTCAACGGCTGGTCGACCGGATCGGTCAAGGCGCT GCGCGACCAGATCACGCAGGACAAGGTGCCGTTCATGACCCAGAGCTACGCGAGCGAGGTGCTCGACCCGCAGAAGCTGC CCTACATCTTCATGGCCGGTCCGACCTACGAGCAGCAGATGATCATCGCGCTGCGCGATCTCGCCAAGAGCGGCGGCAAG AATCTCGTGATCATGCACCCTGACAACGAATACGGCCGCGGACCGGTCAACGTCGTGCGGCAGTCCAAGGTGATCGAGGG CAACGGCCTGACGCTGCAGGACACGATCGAATTTCCCTATGATGCCCAGGACTTGACCGCGCAGATGCTGCGCGTCAAGG CCAAGAACCCCGACATGGTCTACGTCCAGGCGTCGACCCCGCAGCTCCTCGTCGTGCTGCGCGACGCCGCCAAGGTCGGG CTTTCGGCGAAGAAGTTCGTCGGCAACATCTACAACATCTCGCCGGCGATCCCCGAGCAGCTCGGCAACAATGCCGAAGG CTTCCGCGCCATCCAGGTCTATTCGGATTTCGGCAGCGACATTCCGGCCATGGCCGATATCAAGGCGTTCGAGGCCAAGG GCAACGAGATCCAGAAGCGCGACGTCTACTACATGAAAGGCTGGTTCGAGGGGCTCGTCATGGCCAAAGCGATCGAGGCT GCGATCGCCAAGAACGGCGGCAAGGTGCCGGAGGACATCTCGGCGTTCCGCCAGAGCGTGCGCAACGAGATGGAGGGCCT GAAGGACGTCGACACCGGCGGCATCGTGCCGCCCGCGAGCTATGCCAACCACCAGGGCTCGACCCAGGCGCGCATGGCCG AGATCAAGGGCGGCAAATATGTGCCGGTCGGCGACTGGATCGACGCCCGCTGA
Upstream 100 bases:
>100_bases GGCTGATGTCCCCACGCTGGCTGCGGAAGGCAGGCCAGGTCGACCGCGACAAGCAGGGCCTGCAGTTACAGAAGATCAAA TCAACACAGGGAGGACTGGA
Downstream 100 bases:
>100_bases GCGGAGAGGATCATGCTCGCGCTGAAGCAGCTTTCCGCGAATTATGACGGCGCGATCGTGGCGCTCGACGAGGTCGACGT TAGCTGCGGTGCGGGCCAGA
Product: putative branched-chain amino acid ABC transporter substrate-binding protein
Products: ADP; phosphate; L-leucine [Cytoplasm]; ADP; L-valine [Cytoplasm]; L-iso-leucine [Cytoplasm] [C]
Alternate protein names: None
Number of amino acids: Translated: 390; Mature: 390
Protein sequence:
>390_residues MKKLIAAALAAGLLTSAGAARAADITVCIWGTITGPDALVNGMSYGPRDYFEFLNQTKGGIAGNKVKLLLLDGRYKLDEE LKIYRRCVDQEQAVYVNGWSTGSVKALRDQITQDKVPFMTQSYASEVLDPQKLPYIFMAGPTYEQQMIIALRDLAKSGGK NLVIMHPDNEYGRGPVNVVRQSKVIEGNGLTLQDTIEFPYDAQDLTAQMLRVKAKNPDMVYVQASTPQLLVVLRDAAKVG LSAKKFVGNIYNISPAIPEQLGNNAEGFRAIQVYSDFGSDIPAMADIKAFEAKGNEIQKRDVYYMKGWFEGLVMAKAIEA AIAKNGGKVPEDISAFRQSVRNEMEGLKDVDTGGIVPPASYANHQGSTQARMAEIKGGKYVPVGDWIDAR
Sequences:
>Translated_390_residues MKKLIAAALAAGLLTSAGAARAADITVCIWGTITGPDALVNGMSYGPRDYFEFLNQTKGGIAGNKVKLLLLDGRYKLDEE LKIYRRCVDQEQAVYVNGWSTGSVKALRDQITQDKVPFMTQSYASEVLDPQKLPYIFMAGPTYEQQMIIALRDLAKSGGK NLVIMHPDNEYGRGPVNVVRQSKVIEGNGLTLQDTIEFPYDAQDLTAQMLRVKAKNPDMVYVQASTPQLLVVLRDAAKVG LSAKKFVGNIYNISPAIPEQLGNNAEGFRAIQVYSDFGSDIPAMADIKAFEAKGNEIQKRDVYYMKGWFEGLVMAKAIEA AIAKNGGKVPEDISAFRQSVRNEMEGLKDVDTGGIVPPASYANHQGSTQARMAEIKGGKYVPVGDWIDAR >Mature_390_residues MKKLIAAALAAGLLTSAGAARAADITVCIWGTITGPDALVNGMSYGPRDYFEFLNQTKGGIAGNKVKLLLLDGRYKLDEE LKIYRRCVDQEQAVYVNGWSTGSVKALRDQITQDKVPFMTQSYASEVLDPQKLPYIFMAGPTYEQQMIIALRDLAKSGGK NLVIMHPDNEYGRGPVNVVRQSKVIEGNGLTLQDTIEFPYDAQDLTAQMLRVKAKNPDMVYVQASTPQLLVVLRDAAKVG LSAKKFVGNIYNISPAIPEQLGNNAEGFRAIQVYSDFGSDIPAMADIKAFEAKGNEIQKRDVYYMKGWFEGLVMAKAIEA AIAKNGGKVPEDISAFRQSVRNEMEGLKDVDTGGIVPPASYANHQGSTQARMAEIKGGKYVPVGDWIDAR
Specific function: This Protein Is A Component Of The Leucine, Isoleucine, Valine, (Threonine) Transport System, Which Is One Of The Two Periplasmic Binding Protein-Dependent Transport Systems Of The High-Affinity Transport Of The Branched-Chain Amino Acids. [C]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Periplasmic Protein [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: 10140 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 1160 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 8822 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. 8,000 Molecules/Cell In: Glucose minimal med
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 42600; Mature: 42600
Theoretical pI: Translated: 8.11; Mature: 8.11
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKLIAAALAAGLLTSAGAARAADITVCIWGTITGPDALVNGMSYGPRDYFEFLNQTKGG CHHHHHHHHHHHHHHCCCCCCCCEEEEEEEECCCCHHHHHCCCCCCHHHHHHHHHHCCCC IAGNKVKLLLLDGRYKLDEELKIYRRCVDQEQAVYVNGWSTGSVKALRDQITQDKVPFMT CCCCEEEEEEECCCCCCCHHHHHHHHHCCCCCEEEEECCCCCCHHHHHHHHHCCCCCHHH QSYASEVLDPQKLPYIFMAGPTYEQQMIIALRDLAKSGGKNLVIMHPDNEYGRGPVNVVR HHHHHHHCCCCCCCEEEEECCCCHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCHHHHHH QSKVIEGNGLTLQDTIEFPYDAQDLTAQMLRVKAKNPDMVYVQASTPQLLVVLRDAAKVG HCEEECCCCEEEEECCCCCCCHHHHHHHHHHHCCCCCCEEEEEECCCEEEEEEEHHHHHC LSAKKFVGNIYNISPAIPEQLGNNAEGFRAIQVYSDFGSDIPAMADIKAFEAKGNEIQKR CCHHHHHCHHHCCCCCCHHHHCCCCCCEEEEEEEHHCCCCCCCHHHHHHHHCCCCCCHHC DVYYMKGWFEGLVMAKAIEAAIAKNGGKVPEDISAFRQSVRNEMEGLKDVDTGGIVPPAS CHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCH YANHQGSTQARMAEIKGGKYVPVGDWIDAR HCCCCCCCHHHHHHHCCCEEECCCCCCCCC >Mature Secondary Structure MKKLIAAALAAGLLTSAGAARAADITVCIWGTITGPDALVNGMSYGPRDYFEFLNQTKGG CHHHHHHHHHHHHHHCCCCCCCCEEEEEEEECCCCHHHHHCCCCCCHHHHHHHHHHCCCC IAGNKVKLLLLDGRYKLDEELKIYRRCVDQEQAVYVNGWSTGSVKALRDQITQDKVPFMT CCCCEEEEEEECCCCCCCHHHHHHHHHCCCCCEEEEECCCCCCHHHHHHHHHCCCCCHHH QSYASEVLDPQKLPYIFMAGPTYEQQMIIALRDLAKSGGKNLVIMHPDNEYGRGPVNVVR HHHHHHHCCCCCCCEEEEECCCCHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCHHHHHH QSKVIEGNGLTLQDTIEFPYDAQDLTAQMLRVKAKNPDMVYVQASTPQLLVVLRDAAKVG HCEEECCCCEEEEECCCCCCCHHHHHHHHHHHCCCCCCEEEEEECCCEEEEEEEHHHHHC LSAKKFVGNIYNISPAIPEQLGNNAEGFRAIQVYSDFGSDIPAMADIKAFEAKGNEIQKR CCHHHHHCHHHCCCCCCHHHHCCCCCCEEEEEEEHHCCCCCCCHHHHHHHHCCCCCCHHC DVYYMKGWFEGLVMAKAIEAAIAKNGGKVPEDISAFRQSVRNEMEGLKDVDTGGIVPPAS CHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCH YANHQGSTQARMAEIKGGKYVPVGDWIDAR HCCCCCCCHHHHHHHCCCEEECCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; L-leucine [Periplasm]; H2O; ATP; L-valine [Periplasm]; L-iso-leucine [Periplasm] [C]
Specific reaction: ATP + L-leucine [Periplasm] + H2O = ADP + phosphate + L-leucine [Cytoplasm] ATP + L-valine [Periplasm] + H2O = ADP + phosphate + L-valine [Cytoplasm] ATP + L-iso-leucine [Periplasm] + H2O = ADP + phosphate + L-iso-leucine [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA