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The map label for this gene is pcaC [H]

Identifier: 146342681

GI number: 146342681

Start: 6065245

End: 6065649

Strand: Reverse

Name: pcaC [H]

Synonym: BRADO5848

Alternate gene names: 146342681

Gene position: 6065649-6065245 (Counterclockwise)

Preceding gene: 146342682

Following gene: 146342680

Centisome position: 81.35

GC content: 63.21

Gene sequence:

>405_bases
ATGAGCGACGAGAAAGAGCTGTTCGAGAAGGGCCTGAAGGTGCGTCGCGAGGTGCTCGGCGAGGCCTATGTCGATGGCAG
TCTCGCCAAGGCGGACGATTTCATGATGGCCTTCCAGCACATCACGACCGAGATGTGCTGGGGGTATGCCTGGACCCGCC
CGGGTCTCGACCGCCGCACCCGCAGCATCGTCAATCTCGCGATGCTGACGGCGCTGAGCAAGCCGAGCGAGCTGAAGCTG
CACGTCAAGGGCGCGCTCACCAACGGTGTGACGGTCGAGGAGATCAAGGAAATCCTGCTGCATGCGACCGTGTATTGCGG
CATTCCCGCAGGTCTCGAAGCGTTCAAGGCGGCGCATGAGGTGCTGGTCGCGGAGGGCGCGATTGCCAAGAAGGGCGGCG
CATGA

Upstream 100 bases:

>100_bases
GCTTGCGCCGATAATGACAGCCGGGCTTACATGATGGACGCGCCAAGCCTTTGCCAACGGTCGTCGAGACAACAAGTTTT
GCAATAGAGGAGACGTGCGG

Downstream 100 bases:

>100_bases
GCGCGCCGCGAAGCGTCCTGTTCGTGGGCATCGGCAACATGGGCTGGCCGATGTCGGCGCGGCTGCTCGAGGCCGGCTGG
GCCGTGGCGGTCAATGACGC

Product: 4-carboxymuconolactone decarboxylase

Products: NA

Alternate protein names: CMD [H]

Number of amino acids: Translated: 134; Mature: 133

Protein sequence:

>134_residues
MSDEKELFEKGLKVRREVLGEAYVDGSLAKADDFMMAFQHITTEMCWGYAWTRPGLDRRTRSIVNLAMLTALSKPSELKL
HVKGALTNGVTVEEIKEILLHATVYCGIPAGLEAFKAAHEVLVAEGAIAKKGGA

Sequences:

>Translated_134_residues
MSDEKELFEKGLKVRREVLGEAYVDGSLAKADDFMMAFQHITTEMCWGYAWTRPGLDRRTRSIVNLAMLTALSKPSELKL
HVKGALTNGVTVEEIKEILLHATVYCGIPAGLEAFKAAHEVLVAEGAIAKKGGA
>Mature_133_residues
SDEKELFEKGLKVRREVLGEAYVDGSLAKADDFMMAFQHITTEMCWGYAWTRPGLDRRTRSIVNLAMLTALSKPSELKLH
VKGALTNGVTVEEIKEILLHATVYCGIPAGLEAFKAAHEVLVAEGAIAKKGGA

Specific function: Unknown

COG id: COG0599

COG function: function code S; Uncharacterized homolog of gamma-carboxymuconolactone decarboxylase subunit

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003779
- InterPro:   IPR012788 [H]

Pfam domain/function: PF02627 CMD [H]

EC number: =4.1.1.44 [H]

Molecular weight: Translated: 14633; Mature: 14502

Theoretical pI: Translated: 6.94; Mature: 6.94

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
3.7 %Met     (Translated Protein)
5.2 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSDEKELFEKGLKVRREVLGEAYVDGSLAKADDFMMAFQHITTEMCWGYAWTRPGLDRRT
CCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHH
RSIVNLAMLTALSKPSELKLHVKGALTNGVTVEEIKEILLHATVYCGIPAGLEAFKAAHE
HHHHHHHHHHHHCCCCCEEEEEEECCCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHH
VLVAEGAIAKKGGA
HHHHCCCCCCCCCC
>Mature Secondary Structure 
SDEKELFEKGLKVRREVLGEAYVDGSLAKADDFMMAFQHITTEMCWGYAWTRPGLDRRT
CCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHH
RSIVNLAMLTALSKPSELKLHVKGALTNGVTVEEIKEILLHATVYCGIPAGLEAFKAAHE
HHHHHHHHHHHHCCCCCEEEEEEECCCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHH
VLVAEGAIAKKGGA
HHHHCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 2298704 [H]