Click here to switch to the map view.

The map label for this gene is 146342539

Identifier: 146342539

GI number: 146342539

Start: 5903825

End: 5903986

Strand: Direct

Name: 146342539

Synonym: BRADO5701

Alternate gene names: NA

Gene position: 5903825-5903986 (Clockwise)

Preceding gene: 146342538

Following gene: 146342540

Centisome position: 79.18

GC content: 56.79

Gene sequence:

>162_bases
ATGTCGGTCATCCTGCGTTTCCTGAAAGACGAGAGCGGCGCCACGGCCATCGAATACGGCCTGATCGCCGCCGGTATTTC
GATTGCCATCATCGCATCGGTCAATGGCCTCGGCAGCAAGCTCAACACGAAGTTCACGTCGATCAACAGCAGCCTGAAGT
AG

Upstream 100 bases:

>100_bases
GAGAGTCTGCGATCAGCTGAACCTGCATTTAAAGGTTGGCGCCTACTCGTTGCTGCGGAATTAGTTCAACTCATCATCGG
ATTTTACGAGGACGGTATCA

Downstream 100 bases:

>100_bases
TCTATGGTAATGGCATGAACTCGAGCGGATCGAACACTCATACGGCTTTTGTCTCGCTCGAGAGATCGCCCGAACAGCTC
ATCTCGACAAATACCACGCG

Product: putative Flp/Fap pilin component

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 53; Mature: 52

Protein sequence:

>53_residues
MSVILRFLKDESGATAIEYGLIAAGISIAIIASVNGLGSKLNTKFTSINSSLK

Sequences:

>Translated_53_residues
MSVILRFLKDESGATAIEYGLIAAGISIAIIASVNGLGSKLNTKFTSINSSLK
>Mature_52_residues
SVILRFLKDESGATAIEYGLIAAGISIAIIASVNGLGSKLNTKFTSINSSLK

Specific function: Unknown

COG id: COG3847

COG function: function code U; Flp pilus assembly protein, pilin Flp

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 5485; Mature: 5354

Theoretical pI: Translated: 10.03; Mature: 10.03

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
0.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSVILRFLKDESGATAIEYGLIAAGISIAIIASVNGLGSKLNTKFTSINSSLK
CHHHHHHHCCCCCCCHHHHHHHHHCCEEEEEEECCCCCCCCCCEEECCCCCCC
>Mature Secondary Structure 
SVILRFLKDESGATAIEYGLIAAGISIAIIASVNGLGSKLNTKFTSINSSLK
HHHHHHHCCCCCCCHHHHHHHHHCCEEEEEEECCCCCCCCCCEEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA