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The map label for this gene is stbB [H]

Identifier: 146342407

GI number: 146342407

Start: 5751344

End: 5751778

Strand: Reverse

Name: stbB [H]

Synonym: BRADO5565

Alternate gene names: 146342407

Gene position: 5751778-5751344 (Counterclockwise)

Preceding gene: 146342408

Following gene: 146342406

Centisome position: 77.14

GC content: 61.84

Gene sequence:

>435_bases
ATGATCTTGCTTGATACCAACGTGATTTCCGAGGCGCTGAGGCCAGCGCCGTCACCAGAGGTCGTTCGCTGGCTCGACGC
AAATTTTGCCGGCAGTGCAATTTCAAGCATCACCATCCTTGAGCTCGGTGCCGGGCTCGCGCTGCTCAACGCCGGCAAGC
GCAAGGACGCGCTGGAGAACGCGATCACGCGAACAGTCAGGCGGTTTGGGAGTCGCGTCTACGCGTTCGACGCTGCCGCG
GCGCATACGGCTGCAGCACTGCTCGCTGAGGCCCGGGCGCGGGGACTTGCTCTTCATCAGATTCCGAACAAGCTCGCTGA
TCTGCAGATCGCGGGGATCGCACTGGCCTATGGCCTCGACCTTGCGACTCGCAACGTCGGCGATTTTGAAGGCCTGCGCC
TGAAGCTTATCAATCCGTGGTCGGTCGGGACCTGA

Upstream 100 bases:

>100_bases
CGTTCGGAAGTTGGCTGGTCGCGATTTCGCGACCAGGAATCGACCTCGACGAAGCGCTCGATCAACTGCGCTCCGCACCG
GTTCGGCCGGCCCAATATGA

Downstream 100 bases:

>100_bases
CAGCTATGTCGCAAATTACCGCTCGCCGAACGTCAAAATCCGCGCTACCTTGACAAAATCGCGCTGACGAGCCTCGCTTT
GCCTTGACATCAAGGTCACC

Product: putative plasmid stability protein stbB

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 144; Mature: 144

Protein sequence:

>144_residues
MILLDTNVISEALRPAPSPEVVRWLDANFAGSAISSITILELGAGLALLNAGKRKDALENAITRTVRRFGSRVYAFDAAA
AHTAAALLAEARARGLALHQIPNKLADLQIAGIALAYGLDLATRNVGDFEGLRLKLINPWSVGT

Sequences:

>Translated_144_residues
MILLDTNVISEALRPAPSPEVVRWLDANFAGSAISSITILELGAGLALLNAGKRKDALENAITRTVRRFGSRVYAFDAAA
AHTAAALLAEARARGLALHQIPNKLADLQIAGIALAYGLDLATRNVGDFEGLRLKLINPWSVGT
>Mature_144_residues
MILLDTNVISEALRPAPSPEVVRWLDANFAGSAISSITILELGAGLALLNAGKRKDALENAITRTVRRFGSRVYAFDAAA
AHTAAALLAEARARGLALHQIPNKLADLQIAGIALAYGLDLATRNVGDFEGLRLKLINPWSVGT

Specific function: Involved in plasmid stability [H]

COG id: COG1487

COG function: function code R; Predicted nucleic acid-binding protein, contains PIN domain

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002716 [H]

Pfam domain/function: PF01850 PIN [H]

EC number: NA

Molecular weight: Translated: 15242; Mature: 15242

Theoretical pI: Translated: 9.81; Mature: 9.81

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
0.7 %Met     (Translated Protein)
0.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.7 %Met     (Mature Protein)
0.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MILLDTNVISEALRPAPSPEVVRWLDANFAGSAISSITILELGAGLALLNAGKRKDALEN
CEEECHHHHHHHHCCCCCHHHHHHHCCCCCCHHHHHHHHHHHCCCCHHHCCCCHHHHHHH
AITRTVRRFGSRVYAFDAAAAHTAAALLAEARARGLALHQIPNKLADLQIAGIALAYGLD
HHHHHHHHHCCEEEEEHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHH
LATRNVGDFEGLRLKLINPWSVGT
HHHCCCCCCCCEEEEEECCCCCCC
>Mature Secondary Structure
MILLDTNVISEALRPAPSPEVVRWLDANFAGSAISSITILELGAGLALLNAGKRKDALEN
CEEECHHHHHHHHCCCCCHHHHHHHCCCCCCHHHHHHHHHHHCCCCHHHCCCCHHHHHHH
AITRTVRRFGSRVYAFDAAAAHTAAALLAEARARGLALHQIPNKLADLQIAGIALAYGLD
HHHHHHHHHCCEEEEEHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHH
LATRNVGDFEGLRLKLINPWSVGT
HHHCCCCCCCCEEEEEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9326365; 12928499 [H]