| Definition | Bradyrhizobium sp. ORS278 chromosome, complete genome. |
|---|---|
| Accession | NC_009445 |
| Length | 7,456,587 |
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The map label for this gene is fghA [H]
Identifier: 146342305
GI number: 146342305
Start: 5645421
End: 5646266
Strand: Direct
Name: fghA [H]
Synonym: BRADO5460
Alternate gene names: 146342305
Gene position: 5645421-5646266 (Clockwise)
Preceding gene: 146342304
Following gene: 146342307
Centisome position: 75.71
GC content: 67.02
Gene sequence:
>846_bases ATGACGCTCACGACCGTGTCCCAGAACAAATCCCACGGCGGCGTTCAGGGCGTCTATGGCCATGCCAGCCAGGAGACCAA GACCGAGATGACGTTCTCGGTGTTTGTGCCGCCGCATGCGGACGGCGCGAAGCTGCCGGTCGTCTGGTATCTCTCCGGCC TGACCTGCACCCACGCCAATGTCACCGAGAAGGGCGAGTTCCGTGCCGCCTGCGCCGAGCTCGGCCTGATCTTCGTCGCG CCCGACACCTCGCCGCGTGGCGACGGCGTGCCGGGCGATCCGAACAACGCCTATGATTTCGGCCTCGGCGCCGGCTTCTA CGTCGATGCGACGCAGGAGCCGTTTGCGAAGAACTATCGGATGTGGAGCTACGTCACGGAGGAGCTGCCGCACGTGGTCG CCGCGAATTTCCCGGTCGATCCGCGCCGGCAATCGGTGATGGGCCATTCGATGGGCGGCCATGGCGCGCTGACGGTGGCG CTGCGCAACCCCGACCGCTACCGCGCGGCCAGCGCGTTCTCGCCGATCGTCGCCCCCTCGCAGGTGCCATGGGGCGAGAA GGCGCTGTCAGGCTATCTCGGCAGCGACAAGGCGGCATGGCGCAAGCACGACGCGGTGGCGCTGATCGAGGATGGCGCGC GCGTCTCCGACCTGCTGGTCGATATCGGCACCGCCGATCAGTTCCTGACGCAGCAATTGCGCCCCGAGCTGCTCAAGGCC GCCTGCGACAAGGCCAACATCCCGCTGCTGCTGCGCAAGCAGGACGGCTACGACCACAGCTACTACTTCATCTCGACCTA CATGGCCGATCATCTGCGCTGGCACGCGGCCCGGCTCGGCCGCTGA
Upstream 100 bases:
>100_bases CGAGCTCGTGCGTTTGGCGATCGAGAACGGCGTCGCTTGACATCGGGCCGGCGGCGCGCTCCGTTCCGCCGCCCCATGTT CCTTTTCGACAGGTGATCCC
Downstream 100 bases:
>100_bases CATCGGCTCGGCTTGAGTTGCCCGTCGGGCGCGATGCCGTGCGACGGGCGGCGCGGCGATCGCGTTCCTCGTCGGACCGT TGCTTGCGCGTAGATGGCCA
Product: S-formylglutathione hydrolase
Products: NA
Alternate protein names: FGH [H]
Number of amino acids: Translated: 281; Mature: 280
Protein sequence:
>281_residues MTLTTVSQNKSHGGVQGVYGHASQETKTEMTFSVFVPPHADGAKLPVVWYLSGLTCTHANVTEKGEFRAACAELGLIFVA PDTSPRGDGVPGDPNNAYDFGLGAGFYVDATQEPFAKNYRMWSYVTEELPHVVAANFPVDPRRQSVMGHSMGGHGALTVA LRNPDRYRAASAFSPIVAPSQVPWGEKALSGYLGSDKAAWRKHDAVALIEDGARVSDLLVDIGTADQFLTQQLRPELLKA ACDKANIPLLLRKQDGYDHSYYFISTYMADHLRWHAARLGR
Sequences:
>Translated_281_residues MTLTTVSQNKSHGGVQGVYGHASQETKTEMTFSVFVPPHADGAKLPVVWYLSGLTCTHANVTEKGEFRAACAELGLIFVA PDTSPRGDGVPGDPNNAYDFGLGAGFYVDATQEPFAKNYRMWSYVTEELPHVVAANFPVDPRRQSVMGHSMGGHGALTVA LRNPDRYRAASAFSPIVAPSQVPWGEKALSGYLGSDKAAWRKHDAVALIEDGARVSDLLVDIGTADQFLTQQLRPELLKA ACDKANIPLLLRKQDGYDHSYYFISTYMADHLRWHAARLGR >Mature_280_residues TLTTVSQNKSHGGVQGVYGHASQETKTEMTFSVFVPPHADGAKLPVVWYLSGLTCTHANVTEKGEFRAACAELGLIFVAP DTSPRGDGVPGDPNNAYDFGLGAGFYVDATQEPFAKNYRMWSYVTEELPHVVAANFPVDPRRQSVMGHSMGGHGALTVAL RNPDRYRAASAFSPIVAPSQVPWGEKALSGYLGSDKAAWRKHDAVALIEDGARVSDLLVDIGTADQFLTQQLRPELLKAA CDKANIPLLLRKQDGYDHSYYFISTYMADHLRWHAARLGR
Specific function: Serine hydrolase involved in the detoxification of formaldehyde. Hydrolyzes S-formylglutathione to glutathione and formate (Probable) [H]
COG id: COG0627
COG function: function code R; Predicted esterase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the esterase D family [H]
Homologues:
Organism=Homo sapiens, GI33413400, Length=282, Percent_Identity=51.7730496453901, Blast_Score=315, Evalue=2e-86, Organism=Escherichia coli, GI1786551, Length=278, Percent_Identity=47.4820143884892, Blast_Score=278, Evalue=2e-76, Organism=Escherichia coli, GI1788477, Length=279, Percent_Identity=47.3118279569892, Blast_Score=249, Evalue=1e-67, Organism=Caenorhabditis elegans, GI17510185, Length=285, Percent_Identity=50.5263157894737, Blast_Score=276, Evalue=9e-75, Organism=Saccharomyces cerevisiae, GI6322393, Length=297, Percent_Identity=40.7407407407407, Blast_Score=232, Evalue=4e-62, Organism=Drosophila melanogaster, GI45551932, Length=283, Percent_Identity=50.530035335689, Blast_Score=278, Evalue=3e-75, Organism=Drosophila melanogaster, GI24648347, Length=283, Percent_Identity=50.530035335689, Blast_Score=277, Evalue=5e-75,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000801 - InterPro: IPR014186 [H]
Pfam domain/function: PF00756 Esterase [H]
EC number: =3.1.2.12 [H]
Molecular weight: Translated: 30667; Mature: 30536
Theoretical pI: Translated: 6.91; Mature: 6.91
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTLTTVSQNKSHGGVQGVYGHASQETKTEMTFSVFVPPHADGAKLPVVWYLSGLTCTHAN CEEEEECCCCCCCCCCEEECCCCCCCCCEEEEEEEECCCCCCCCCEEEEEECCEEEECCC VTEKGEFRAACAELGLIFVAPDTSPRGDGVPGDPNNAYDFGLGAGFYVDATQEPFAKNYR CCCCCHHHHHHHHCCEEEEECCCCCCCCCCCCCCCCCEECCCCCCEEEECCCCHHHHCCH MWSYVTEELPHVVAANFPVDPRRQSVMGHSMGGHGALTVALRNPDRYRAASAFSPIVAPS HHHHHHHHCCCEEECCCCCCHHHHHHHCCCCCCCCEEEEEEECCCHHHHHHHCCCCCCCC QVPWGEKALSGYLGSDKAAWRKHDAVALIEDGARVSDLLVDIGTADQFLTQQLRPELLKA CCCCCHHHHHCCCCCCCHHHHCCCCEEEEECCCCHHHHEEECCCHHHHHHHHHHHHHHHH ACDKANIPLLLRKQDGYDHSYYFISTYMADHLRWHAARLGR HCCCCCCCEEEEECCCCCCEEEEHHHHHHHHHHHHHHHCCC >Mature Secondary Structure TLTTVSQNKSHGGVQGVYGHASQETKTEMTFSVFVPPHADGAKLPVVWYLSGLTCTHAN EEEEECCCCCCCCCCEEECCCCCCCCCEEEEEEEECCCCCCCCCEEEEEECCEEEECCC VTEKGEFRAACAELGLIFVAPDTSPRGDGVPGDPNNAYDFGLGAGFYVDATQEPFAKNYR CCCCCHHHHHHHHCCEEEEECCCCCCCCCCCCCCCCCEECCCCCCEEEECCCCHHHHCCH MWSYVTEELPHVVAANFPVDPRRQSVMGHSMGGHGALTVALRNPDRYRAASAFSPIVAPS HHHHHHHHCCCEEECCCCCCHHHHHHHCCCCCCCCEEEEEEECCCHHHHHHHCCCCCCCC QVPWGEKALSGYLGSDKAAWRKHDAVALIEDGARVSDLLVDIGTADQFLTQQLRPELLKA CCCCCHHHHHCCCCCCCHHHHCCCCEEEEECCCCHHHHEEECCCHHHHHHHHHHHHHHHH ACDKANIPLLLRKQDGYDHSYYFISTYMADHLRWHAARLGR HCCCCCCCEEEEECCCCCCEEEEHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8892832 [H]