Click here to switch to the map view.

The map label for this gene is sufB [C]

Identifier: 146342292

GI number: 146342292

Start: 5633609

End: 5635126

Strand: Reverse

Name: sufB [C]

Synonym: BRADO5447

Alternate gene names: 146342292

Gene position: 5635126-5633609 (Counterclockwise)

Preceding gene: 146342293

Following gene: 146342291

Centisome position: 75.57

GC content: 61.2

Gene sequence:

>1518_bases
ATGGCAGCGGTTCAGGAGACCATTGATCGCGTCAAGGGCATTGACGTCGATCAATATCGTTACGGGTTCGAGACGCAGAT
CGAATCCGAGAAGGCTCCGAAGGGCCTGTCGGAAGACACCATCCGCTTCATCTCGGCGAAGAAGAACGAGCCGGCCTGGA
TGCTGGAATGGCGGCTGGAGGCGTATCGCCGCTGGCTGACCATGACCGAGCCGACCTGGGCCCGCGTCGGCTATCCGAAG
ATCGACTATCAGGATCTCTATTACTATTCGGCGCCGAAGCCGAAGAAGAAAGTCGCCTCGCTCGACGAGATCGATCCGGA
GATCCTCAAAACCTATGAGAAGCTCGGCATTCCCCTGCGCGAGGTCGAACTGCTCGAAGGCGTCGAGCGTCCCACCGTAG
CCGCGGAATCCGAGGATGGCGAGGCGGCGGCGCCGCGTACCAAGATCGCGGTCGATGCCGTGTTCGACTCGGTGTCGGTG
GCGACCACCTTCAAGGAGGAGCTGAAGAAGGCTGGCGTGATCTTCATGCCGATCTCCGAGGCGCTGCGCGAGCATCCCGA
CCTAGTGCAGAAGTATCTCGGCACGGTGGTGCCGACCACCGACAACTATTTTGCGACGTTGAATTCGGCGGTGTTCTCCG
ACGGGTCGTTCGTCTACATCCCGCCGGGCGTGCGCTGCCCGATGGAGCTGTCGACCTATTTCCGCATCAACGAGCGCAAC
ACCGGCCAGTTCGAGCGGACGTTGATCATCGCCGACAAGGGCGCCTACGTCTCCTATCTCGAGGGTTGCACCGCGCCGCA
GCGCGACGAGAACCAGCTGCATGCCGCCGTCGTCGAGCTGGTCGCGCTGGACGATGCCGAGATCAAATATTCGACAGTGC
AGAACTGGTATCCCGGCAATTCGGAAGGCGTGGGCGGCATTTACAACTTCGTCACCAAGCGTGGTGATTGCCGCGGCGTC
AATTCGAAGATCTCCTGGACGCAGGTCGAGACGGGCTCCGCGATCACCTGGAAATATCCGAGCTGCATCCTGCGCGGCGA
CAATTCGAGCGGCGAGTTCTATTCGATCGCGATCTCCAACGGCTTCCAGCAGGTCGATAGCGGCACCAAAATGATCCATC
TCGGCAAGAACACGTCGAGCCGGATCATCTCCAAGGGCATCGCCGCGGGCAAGTCGCAGAACACCTATCGCGGCCTCGTC
AGCGCCCACCGCAAGGCGTCCGGCGCGCGCAACTTCACCGCCTGCGATTCGCTGCTGATCGGCGACAAATGCGGCGCGCA
CACCGTGCCCTATATCGAGGCCAAGAATTCCTCGGCGGTGTTCGAGCATGAGGCGACGACCTCGAAGATCTCGGAGGACG
TGCTGTTCTACTGCATCCAGCGCGGTCTCAGCCAGGAAGAGGCGGTCGGCCTCGTCGTCAACGGCTTCGTCAAGGACGTG
CTGCAGCAGCTGCCGATGGAGTTCGCGGTCGAGGCGCAGAAGCTGATCTCGATCAGCCTCGAAGGTTCAGTCGGATAA

Upstream 100 bases:

>100_bases
CTTCGACGCGCCGCAATGCGCCGCCGTCTGTCCGGTGCCGGACACCTGCGTGCCCGCCTGACGCGGGCACCTCGTCGACA
GCTTGGAAGCGGAGTGAGAG

Downstream 100 bases:

>100_bases
GGACGTCGCGCGCGGCGACAACAGATGAGGAGTGTTCGATGACGGCCTTGCTCGAAATCAAGGGGCTCCATGCCGAGATC
TCCGGTGGTCGCAAGATCAT

Product: cysteine desulfurase activator complex subunit SufB

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 505; Mature: 504

Protein sequence:

>505_residues
MAAVQETIDRVKGIDVDQYRYGFETQIESEKAPKGLSEDTIRFISAKKNEPAWMLEWRLEAYRRWLTMTEPTWARVGYPK
IDYQDLYYYSAPKPKKKVASLDEIDPEILKTYEKLGIPLREVELLEGVERPTVAAESEDGEAAAPRTKIAVDAVFDSVSV
ATTFKEELKKAGVIFMPISEALREHPDLVQKYLGTVVPTTDNYFATLNSAVFSDGSFVYIPPGVRCPMELSTYFRINERN
TGQFERTLIIADKGAYVSYLEGCTAPQRDENQLHAAVVELVALDDAEIKYSTVQNWYPGNSEGVGGIYNFVTKRGDCRGV
NSKISWTQVETGSAITWKYPSCILRGDNSSGEFYSIAISNGFQQVDSGTKMIHLGKNTSSRIISKGIAAGKSQNTYRGLV
SAHRKASGARNFTACDSLLIGDKCGAHTVPYIEAKNSSAVFEHEATTSKISEDVLFYCIQRGLSQEEAVGLVVNGFVKDV
LQQLPMEFAVEAQKLISISLEGSVG

Sequences:

>Translated_505_residues
MAAVQETIDRVKGIDVDQYRYGFETQIESEKAPKGLSEDTIRFISAKKNEPAWMLEWRLEAYRRWLTMTEPTWARVGYPK
IDYQDLYYYSAPKPKKKVASLDEIDPEILKTYEKLGIPLREVELLEGVERPTVAAESEDGEAAAPRTKIAVDAVFDSVSV
ATTFKEELKKAGVIFMPISEALREHPDLVQKYLGTVVPTTDNYFATLNSAVFSDGSFVYIPPGVRCPMELSTYFRINERN
TGQFERTLIIADKGAYVSYLEGCTAPQRDENQLHAAVVELVALDDAEIKYSTVQNWYPGNSEGVGGIYNFVTKRGDCRGV
NSKISWTQVETGSAITWKYPSCILRGDNSSGEFYSIAISNGFQQVDSGTKMIHLGKNTSSRIISKGIAAGKSQNTYRGLV
SAHRKASGARNFTACDSLLIGDKCGAHTVPYIEAKNSSAVFEHEATTSKISEDVLFYCIQRGLSQEEAVGLVVNGFVKDV
LQQLPMEFAVEAQKLISISLEGSVG
>Mature_504_residues
AAVQETIDRVKGIDVDQYRYGFETQIESEKAPKGLSEDTIRFISAKKNEPAWMLEWRLEAYRRWLTMTEPTWARVGYPKI
DYQDLYYYSAPKPKKKVASLDEIDPEILKTYEKLGIPLREVELLEGVERPTVAAESEDGEAAAPRTKIAVDAVFDSVSVA
TTFKEELKKAGVIFMPISEALREHPDLVQKYLGTVVPTTDNYFATLNSAVFSDGSFVYIPPGVRCPMELSTYFRINERNT
GQFERTLIIADKGAYVSYLEGCTAPQRDENQLHAAVVELVALDDAEIKYSTVQNWYPGNSEGVGGIYNFVTKRGDCRGVN
SKISWTQVETGSAITWKYPSCILRGDNSSGEFYSIAISNGFQQVDSGTKMIHLGKNTSSRIISKGIAAGKSQNTYRGLVS
AHRKASGARNFTACDSLLIGDKCGAHTVPYIEAKNSSAVFEHEATTSKISEDVLFYCIQRGLSQEEAVGLVVNGFVKDVL
QQLPMEFAVEAQKLISISLEGSVG

Specific function: Unknown

COG id: COG0719

COG function: function code O; ABC-type transport system involved in Fe-S cluster assembly, permease component

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0051 (ycf24) family [H]

Homologues:

Organism=Escherichia coli, GI87081955, Length=501, Percent_Identity=58.2834331337325, Blast_Score=622, Evalue=1e-179,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010231
- InterPro:   IPR000825 [H]

Pfam domain/function: PF01458 UPF0051 [H]

EC number: NA

Molecular weight: Translated: 55955; Mature: 55824

Theoretical pI: Translated: 5.11; Mature: 5.11

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAAVQETIDRVKGIDVDQYRYGFETQIESEKAPKGLSEDTIRFISAKKNEPAWMLEWRLE
CCHHHHHHHHHHCCCHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCEEHHHHHH
AYRRWLTMTEPTWARVGYPKIDYQDLYYYSAPKPKKKVASLDEIDPEILKTYEKLGIPLR
HHHHHHCCCCCCHHCCCCCCCCCCCEEEECCCCCHHHHHCHHCCCHHHHHHHHHHCCCHH
EVELLEGVERPTVAAESEDGEAAAPRTKIAVDAVFDSVSVATTFKEELKKAGVIFMPISE
HHHHHHCCCCCCEECCCCCCCCCCCCHHEEHHHHHCCHHHHHHHHHHHHHCCEEEEEHHH
ALREHPDLVQKYLGTVVPTTDNYFATLNSAVFSDGSFVYIPPGVRCPMELSTYFRINERN
HHHCCHHHHHHHHCCCCCCCCCHHHHHHHHHCCCCCEEEECCCCCCCCEEEEEEEECCCC
TGQFERTLIIADKGAYVSYLEGCTAPQRDENQLHAAVVELVALDDAEIKYSTVQNWYPGN
CCCEEEEEEEECCCCHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCCCEEEEHHCCCCCCC
SEGVGGIYNFVTKRGDCRGVNSKISWTQVETGSAITWKYPSCILRGDNSSGEFYSIAISN
CCCCCHHHHHHHCCCCCCCCCCCEEEEEEECCCEEEEECCEEEEECCCCCCCEEEEEECC
GFQQVDSGTKMIHLGKNTSSRIISKGIAAGKSQNTYRGLVSAHRKASGARNFTACDSLLI
CHHHHCCCCEEEEECCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCCHHHHHEEE
GDKCGAHTVPYIEAKNSSAVFEHEATTSKISEDVLFYCIQRGLSQEEAVGLVVNGFVKDV
CCCCCCCCCCEEEECCCCEEEECCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH
LQQLPMEFAVEAQKLISISLEGSVG
HHHCCHHHHHHHHHEEEEEECCCCC
>Mature Secondary Structure 
AAVQETIDRVKGIDVDQYRYGFETQIESEKAPKGLSEDTIRFISAKKNEPAWMLEWRLE
CHHHHHHHHHHCCCHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCEEHHHHHH
AYRRWLTMTEPTWARVGYPKIDYQDLYYYSAPKPKKKVASLDEIDPEILKTYEKLGIPLR
HHHHHHCCCCCCHHCCCCCCCCCCCEEEECCCCCHHHHHCHHCCCHHHHHHHHHHCCCHH
EVELLEGVERPTVAAESEDGEAAAPRTKIAVDAVFDSVSVATTFKEELKKAGVIFMPISE
HHHHHHCCCCCCEECCCCCCCCCCCCHHEEHHHHHCCHHHHHHHHHHHHHCCEEEEEHHH
ALREHPDLVQKYLGTVVPTTDNYFATLNSAVFSDGSFVYIPPGVRCPMELSTYFRINERN
HHHCCHHHHHHHHCCCCCCCCCHHHHHHHHHCCCCCEEEECCCCCCCCEEEEEEEECCCC
TGQFERTLIIADKGAYVSYLEGCTAPQRDENQLHAAVVELVALDDAEIKYSTVQNWYPGN
CCCEEEEEEEECCCCHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCCCEEEEHHCCCCCCC
SEGVGGIYNFVTKRGDCRGVNSKISWTQVETGSAITWKYPSCILRGDNSSGEFYSIAISN
CCCCCHHHHHHHCCCCCCCCCCCEEEEEEECCCEEEEECCEEEEECCCCCCCEEEEEECC
GFQQVDSGTKMIHLGKNTSSRIISKGIAAGKSQNTYRGLVSAHRKASGARNFTACDSLLI
CHHHHCCCCEEEEECCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCCHHHHHEEE
GDKCGAHTVPYIEAKNSSAVFEHEATTSKISEDVLFYCIQRGLSQEEAVGLVVNGFVKDV
CCCCCCCCCCEEEECCCCEEEECCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH
LQQLPMEFAVEAQKLISISLEGSVG
HHHCCHHHHHHHHHEEEEEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8590279; 8905231 [H]