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The map label for this gene is fixU [H]

Identifier: 146342268

GI number: 146342268

Start: 5613441

End: 5613662

Strand: Reverse

Name: fixU [H]

Synonym: BRADO5422

Alternate gene names: 146342268

Gene position: 5613662-5613441 (Counterclockwise)

Preceding gene: 146342269

Following gene: 146342267

Centisome position: 75.28

GC content: 64.86

Gene sequence:

>222_bases
ATGAAAGTCATGATCCGCCGCTCGCCGGAAACCGGCCTCTCCATCTACGTCCCCAAGAAGGACCTGGAGGAGCCGATCGT
CGAGACCGAGCACGAGACCTTGTGGGGCGGCTGGATCCGCATCGCCAATGGCTGGGTGCTCGAGCTGCCGCAGATGGCCG
CCGACACGCGGCTGCCGATCACGATCAATGCGCGCAAGCGCGGTGGAGAAGGGGACGAGTGA

Upstream 100 bases:

>100_bases
TGCCCGACATCGTCGGCCGTCTCCGCGAGACCTCGCCGTCCTGGCTGCAACATCATCCGTCAAACGCGGCGGACGCCCTT
CGTCCCACGGAGCTTACGCA

Downstream 100 bases:

>100_bases
TGAATGCGCCGCTTCCTCATATCGACATCATCAGGCAGGCCGACGCCGAGGCGCTGCTGAAGGACGTCGTCGCCAAGCTG
AAGGCTGGCAAGGTCGTTCC

Product: fixU nitrogen fixation protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 73; Mature: 73

Protein sequence:

>73_residues
MKVMIRRSPETGLSIYVPKKDLEEPIVETEHETLWGGWIRIANGWVLELPQMAADTRLPITINARKRGGEGDE

Sequences:

>Translated_73_residues
MKVMIRRSPETGLSIYVPKKDLEEPIVETEHETLWGGWIRIANGWVLELPQMAADTRLPITINARKRGGEGDE
>Mature_73_residues
MKVMIRRSPETGLSIYVPKKDLEEPIVETEHETLWGGWIRIANGWVLELPQMAADTRLPITINARKRGGEGDE

Specific function: Unknown

COG id: COG5554

COG function: function code Q; Nitrogen fixation protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: To R.leguminosarum Sym plasmid fixU. Also to the N- terminal of R.meliloti mosB protein [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009727 [H]

Pfam domain/function: PF06988 NifT [H]

EC number: NA

Molecular weight: Translated: 8301; Mature: 8301

Theoretical pI: Translated: 5.10; Mature: 5.10

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.1 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
4.1 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKVMIRRSPETGLSIYVPKKDLEEPIVETEHETLWGGWIRIANGWVLELPQMAADTRLPI
CEEEEECCCCCCEEEEECCCCCCCCCCCCCCCEECCCEEEECCCEEEECCCCCCCCCCCE
TINARKRGGEGDE
EEECCCCCCCCCC
>Mature Secondary Structure
MKVMIRRSPETGLSIYVPKKDLEEPIVETEHETLWGGWIRIANGWVLELPQMAADTRLPI
CEEEEECCCCCCEEEEECCCCCCCCCCCCCCCEECCCEEEECCCEEEECCCCCCCCCCCE
TINARKRGGEGDE
EEECCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8796346; 9163424 [H]