| Definition | Bradyrhizobium sp. ORS278 chromosome, complete genome. |
|---|---|
| Accession | NC_009445 |
| Length | 7,456,587 |
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The map label for this gene is 146341695
Identifier: 146341695
GI number: 146341695
Start: 4997482
End: 4998921
Strand: Reverse
Name: 146341695
Synonym: BRADO4800
Alternate gene names: NA
Gene position: 4998921-4997482 (Counterclockwise)
Preceding gene: 146341696
Following gene: 146341694
Centisome position: 67.04
GC content: 62.5
Gene sequence:
>1440_bases ATGTACGACCGTGAGAAGAATCTCTTTGCGTCCTATGCCGGCAAGCACATCAGCCGGCGTGATCTGCTCGACGGCGCCGC CAAGCTCGGCATCGCCGGTGTCGCCGCCAATGCCGCCTTTGCTTCCGAGATGTCGAAGGCGATGGCCGCGGATTTCAACT GGAAGTCCCAGAGCGGCAAGACGGTCAAGCTGCTGCTCAACAAGCATCCTTACGTTGACGCGATGATCGGCGACATCGAG GCGTTCAAGAGCCTGACCGGCATGAACGTCACCTACGACATCTTCCCGGAGGATGTCTATTTCGACAAGGTGACGGCGGC GCTGTCGTCGAAATCGGATCAGTACGACGCCTTCATGACCGGCGCCTACATGACCTGGACCTATGGTCCGGCCGGCTGGA TCGAGGACCTCAACACCTACATCAAGGATCCAGCCAAGACCAACCCCGCTTTCGCCTGGGACGACGTGCTGCCGGGCCTG CGCTCCTCGACCGCCTGGGACGGCGTCGCCGGCTCCGAACTCGGCTCGGGCAAGGCCAAGCAGTGGTGCATTCCGTGGGG CTACGAACTCAACAACGTCACCTATAACCGCAACATCTTCAGCAAGGTCGGCGTCAAGCCGCCGACCAATCTCGACGACA TGGTGGAGGTCGCCGCCAAGATCACCAAGGATGCCGGCGGCCCGTATGGCGTCGGCGTGCGCGGCTCGCGCTCCTGGGCC ACCATCCATCCAGGCTTCCTCTCGGCCTATGCCAATTTCGGCCAGAAGGACTTCGTGATGGAGGGCGGCAAGCTCAAGGC CGCAATGAACACGAAGGCCTCGAAGGACTTCCACGAGAAGTGGGTCAAGATGATCCAGGGCTCGGGCCCGAAGAACTGGT CGACCTACACCTGGTACCAGGTCGGCACGGATCTCGGCGCCGGCGCCTCCGGCATGATCTTCGATGCCGACATCCTCGGC TACTTCATGAACGGCGGTGAGAACAAGGAGCGCGGCAATCTCGGCTACGCCCCGTTCGCGGCCAACCCGGCCGCCAAAGC GCCGACGCCGAACGTCTGGATCTGGTCGCTGGCGATGTCGAGCTTCTCCAAGCAGAAGGACGCGGCCTGGATCTTCATGC AGTGGGCGGCCTCCGTCGAGCACGACCTGTTCGGCGCGCGCAAGATGGACTTCGTCAATCCGGTCCGCACCTCCGTGTGG AAGGACAGCGAGTTCCGCGACCGCATCGCCAAGTCTTATCCGGGCTATCTCGAGCAGCATGACCTCTCGGCACCCGGCGC GAAGATCTACTTTACAGCGCAGCCGCTGTTCTTCGATCTCACGACGGAGTGGGCGGCGTCGCTGCAGAAGATGGTGGCCA AGGAGATCACCGTTGACGAGGGCCTCGACAAGCTTGCCGAGAGCATCAACCGTCAGCTGAAGCAGGCCGGCCTCGGCTGA
Upstream 100 bases:
>100_bases ACTCAGTACCGACAAGCCGGAGAAAACATCCGGTGTTCTTAAAAACAAAAGTCGGAAGGGCAGGTAACGCGAAAAGTCTC CAAAAAATAGGGAGGGTTGA
Downstream 100 bases:
>100_bases GGCTGCGCGGCATCTTCCTGACCGCCCGTCGGTCCGGACGCTCCCCACAAGCGTCCGGACCGGCCCCATCTTCCGTGCGA TGATGTGATCACGCCTATCA
Product: putative sugar ABC transporter periplasmic substrate binding protein
Products: NA
Alternate protein names: ABC Sugar Transporter; ABC Transporter For Sugars; ABC-Type Sugar Transport System Periplasmic Component; Sorbitol/Mannitol ABC Transporter; Sugar ABC Transporter Periplasmic Protein; Transporter-Like Exported Protein; Sugar ABC Transporter
Number of amino acids: Translated: 479; Mature: 479
Protein sequence:
>479_residues MYDREKNLFASYAGKHISRRDLLDGAAKLGIAGVAANAAFASEMSKAMAADFNWKSQSGKTVKLLLNKHPYVDAMIGDIE AFKSLTGMNVTYDIFPEDVYFDKVTAALSSKSDQYDAFMTGAYMTWTYGPAGWIEDLNTYIKDPAKTNPAFAWDDVLPGL RSSTAWDGVAGSELGSGKAKQWCIPWGYELNNVTYNRNIFSKVGVKPPTNLDDMVEVAAKITKDAGGPYGVGVRGSRSWA TIHPGFLSAYANFGQKDFVMEGGKLKAAMNTKASKDFHEKWVKMIQGSGPKNWSTYTWYQVGTDLGAGASGMIFDADILG YFMNGGENKERGNLGYAPFAANPAAKAPTPNVWIWSLAMSSFSKQKDAAWIFMQWAASVEHDLFGARKMDFVNPVRTSVW KDSEFRDRIAKSYPGYLEQHDLSAPGAKIYFTAQPLFFDLTTEWAASLQKMVAKEITVDEGLDKLAESINRQLKQAGLG
Sequences:
>Translated_479_residues MYDREKNLFASYAGKHISRRDLLDGAAKLGIAGVAANAAFASEMSKAMAADFNWKSQSGKTVKLLLNKHPYVDAMIGDIE AFKSLTGMNVTYDIFPEDVYFDKVTAALSSKSDQYDAFMTGAYMTWTYGPAGWIEDLNTYIKDPAKTNPAFAWDDVLPGL RSSTAWDGVAGSELGSGKAKQWCIPWGYELNNVTYNRNIFSKVGVKPPTNLDDMVEVAAKITKDAGGPYGVGVRGSRSWA TIHPGFLSAYANFGQKDFVMEGGKLKAAMNTKASKDFHEKWVKMIQGSGPKNWSTYTWYQVGTDLGAGASGMIFDADILG YFMNGGENKERGNLGYAPFAANPAAKAPTPNVWIWSLAMSSFSKQKDAAWIFMQWAASVEHDLFGARKMDFVNPVRTSVW KDSEFRDRIAKSYPGYLEQHDLSAPGAKIYFTAQPLFFDLTTEWAASLQKMVAKEITVDEGLDKLAESINRQLKQAGLG >Mature_479_residues MYDREKNLFASYAGKHISRRDLLDGAAKLGIAGVAANAAFASEMSKAMAADFNWKSQSGKTVKLLLNKHPYVDAMIGDIE AFKSLTGMNVTYDIFPEDVYFDKVTAALSSKSDQYDAFMTGAYMTWTYGPAGWIEDLNTYIKDPAKTNPAFAWDDVLPGL RSSTAWDGVAGSELGSGKAKQWCIPWGYELNNVTYNRNIFSKVGVKPPTNLDDMVEVAAKITKDAGGPYGVGVRGSRSWA TIHPGFLSAYANFGQKDFVMEGGKLKAAMNTKASKDFHEKWVKMIQGSGPKNWSTYTWYQVGTDLGAGASGMIFDADILG YFMNGGENKERGNLGYAPFAANPAAKAPTPNVWIWSLAMSSFSKQKDAAWIFMQWAASVEHDLFGARKMDFVNPVRTSVW KDSEFRDRIAKSYPGYLEQHDLSAPGAKIYFTAQPLFFDLTTEWAASLQKMVAKEITVDEGLDKLAESINRQLKQAGLG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 52731; Mature: 52731
Theoretical pI: Translated: 7.71; Mature: 7.71
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 3.5 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 3.5 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MYDREKNLFASYAGKHISRRDLLDGAAKLGIAGVAANAAFASEMSKAMAADFNWKSQSGK CCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC TVKLLLNKHPYVDAMIGDIEAFKSLTGMNVTYDIFPEDVYFDKVTAALSSKSDQYDAFMT EEEEEECCCCCHHHHHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHHHHCCCCCCHHEEE GAYMTWTYGPAGWIEDLNTYIKDPAKTNPAFAWDDVLPGLRSSTAWDGVAGSELGSGKAK CCEEEEECCCCHHHHHHHHHHCCCCCCCCCEEHHHHCCCCCCCCCCCCCCCCCCCCCCCC QWCIPWGYELNNVTYNRNIFSKVGVKPPTNLDDMVEVAAKITKDAGGPYGVGVRGSRSWA EEEECCCCEECCEEECCCHHHHCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCEE TIHPGFLSAYANFGQKDFVMEGGKLKAAMNTKASKDFHEKWVKMIQGSGPKNWSTYTWYQ EECCHHHHHHHHCCCCCEEECCCEEEEECCCCCCHHHHHHHHHHHHCCCCCCCCEEEEEE VGTDLGAGASGMIFDADILGYFMNGGENKERGNLGYAPFAANPAAKAPTPNVWIWSLAMS ECCCCCCCCCCCEEEHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEHHHHHH SFSKQKDAAWIFMQWAASVEHDLFGARKMDFVNPVRTSVWKDSEFRDRIAKSYPGYLEQH HHCCCCCCEEEEEHHHHHHHHHHCCCHHHHHHCHHHHHHCCCHHHHHHHHHHCCCCHHHC DLSAPGAKIYFTAQPLFFDLTTEWAASLQKMVAKEITVDEGLDKLAESINRQLKQAGLG CCCCCCCEEEEEECCEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure MYDREKNLFASYAGKHISRRDLLDGAAKLGIAGVAANAAFASEMSKAMAADFNWKSQSGK CCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC TVKLLLNKHPYVDAMIGDIEAFKSLTGMNVTYDIFPEDVYFDKVTAALSSKSDQYDAFMT EEEEEECCCCCHHHHHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHHHHCCCCCCHHEEE GAYMTWTYGPAGWIEDLNTYIKDPAKTNPAFAWDDVLPGLRSSTAWDGVAGSELGSGKAK CCEEEEECCCCHHHHHHHHHHCCCCCCCCCEEHHHHCCCCCCCCCCCCCCCCCCCCCCCC QWCIPWGYELNNVTYNRNIFSKVGVKPPTNLDDMVEVAAKITKDAGGPYGVGVRGSRSWA EEEECCCCEECCEEECCCHHHHCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCEE TIHPGFLSAYANFGQKDFVMEGGKLKAAMNTKASKDFHEKWVKMIQGSGPKNWSTYTWYQ EECCHHHHHHHHCCCCCEEECCCEEEEECCCCCCHHHHHHHHHHHHCCCCCCCCEEEEEE VGTDLGAGASGMIFDADILGYFMNGGENKERGNLGYAPFAANPAAKAPTPNVWIWSLAMS ECCCCCCCCCCCEEEHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEHHHHHH SFSKQKDAAWIFMQWAASVEHDLFGARKMDFVNPVRTSVWKDSEFRDRIAKSYPGYLEQH HHCCCCCCEEEEEHHHHHHHHHHCCCHHHHHHCHHHHHHCCCHHHHHHHHHHCCCCHHHC DLSAPGAKIYFTAQPLFFDLTTEWAASLQKMVAKEITVDEGLDKLAESINRQLKQAGLG CCCCCCCEEEEEECCEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA