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The map label for this gene is soxS [C]

Identifier: 146341681

GI number: 146341681

Start: 4980919

End: 4981740

Strand: Reverse

Name: soxS [C]

Synonym: BRADO4786

Alternate gene names: 146341681

Gene position: 4981740-4980919 (Counterclockwise)

Preceding gene: 146341682

Following gene: 146341680

Centisome position: 66.81

GC content: 63.38

Gene sequence:

>822_bases
ATGAGTAGGGCGCTCGCCGTCTTTCACGCTCGCTTCGGCCGCGCGACGGTCTATCAGCTCAATCGGCCGTTCAACGTGCA
TGCCCATCGCGAAGGCCACCTGATTTTTCACGTCGGCGGTTCGCCGGCCCATATCGATGTCTGCGATCGGCGCCATGTCA
TCGAAGAACAGTCCATCGTGGCGGTGAATCCCTGGGAACCGCACAATTTCGTGCCGACTGATACGGACAATGGCGCGATC
TTCTTTGTGCTTTACGTCAACGGGGAATGGTTTGCGCCGCCGGCTGCCCGTGAGGGTCTGAAGTTCGGCCGAACCTGCTT
TCGCCGCACGGCCGCGCTCGACCGCTGCATTCGCCGCACCGCGGCGCTGGTGTGTGGCGCGCCATCGCTCGGCTGCCTCG
ATGGCGAACTGCGTCAGCTGATCGACAGCTGCTATGAGGAGAGCTGGCGGGTGACCGAGCTGATGCCGGAGCGGCCAAGC
GCCGAGGTCACGGATTTCCGGGTTCGCAAGTGCATCAAGCTGATGTCGGACAGCCCCTGTGCCGAGATCGAGCTCGACCA
CATCGCGCGCGAATCGGGGCTGTCCCGACCGCACTTCTATCGCTTGTTCCGCAGCCAGACCGGCGTGACGCCGAACCTCT
ATCTCAACACGCTGCTGATGGAACGGGCGCTGGATGCGCTGGTTGCGACGGAGGCGCCGATCGCCGACATCGGCTTCGAC
CTCGGCTTCTCGTCGCAAAGCGGCTTTACCCGCTTCTTTGCCGGCAATGTCGGCATGGCCCCGACCGATTATCGTCGCGC
TGCAAAAGTGCTGCGCGCCTGA

Upstream 100 bases:

>100_bases
TGGAGCGCTCGCTCTGGCCGCGTCGTCGCGTCTCTTGCTTTCTGGAGAGCAATGATCGACGCTAGCGGGATAAACAAGAA
GTCATATCGGTGAGGAAGTG

Downstream 100 bases:

>100_bases
CGTGCTGCTGCGCACCGCGCGAAAAGAGACTGTCGATCAAACAGGCGGTCGCGTCTGCCGCTAGTCTTGCCCGAACGCGA
TCCGGCAAAAGGGATCCGAC

Product: AraC/XylS family transcriptional regulator

Products: NA

Alternate protein names: Transcriptional Regulator; Transcriptional Regulator AraC Family; Helix-Turn-Helix Domain-Containing Protein; Transcription Regulator Protein; Transcriptional Regulator Protein; Transcriptional Regulator MtlR

Number of amino acids: Translated: 273; Mature: 272

Protein sequence:

>273_residues
MSRALAVFHARFGRATVYQLNRPFNVHAHREGHLIFHVGGSPAHIDVCDRRHVIEEQSIVAVNPWEPHNFVPTDTDNGAI
FFVLYVNGEWFAPPAAREGLKFGRTCFRRTAALDRCIRRTAALVCGAPSLGCLDGELRQLIDSCYEESWRVTELMPERPS
AEVTDFRVRKCIKLMSDSPCAEIELDHIARESGLSRPHFYRLFRSQTGVTPNLYLNTLLMERALDALVATEAPIADIGFD
LGFSSQSGFTRFFAGNVGMAPTDYRRAAKVLRA

Sequences:

>Translated_273_residues
MSRALAVFHARFGRATVYQLNRPFNVHAHREGHLIFHVGGSPAHIDVCDRRHVIEEQSIVAVNPWEPHNFVPTDTDNGAI
FFVLYVNGEWFAPPAAREGLKFGRTCFRRTAALDRCIRRTAALVCGAPSLGCLDGELRQLIDSCYEESWRVTELMPERPS
AEVTDFRVRKCIKLMSDSPCAEIELDHIARESGLSRPHFYRLFRSQTGVTPNLYLNTLLMERALDALVATEAPIADIGFD
LGFSSQSGFTRFFAGNVGMAPTDYRRAAKVLRA
>Mature_272_residues
SRALAVFHARFGRATVYQLNRPFNVHAHREGHLIFHVGGSPAHIDVCDRRHVIEEQSIVAVNPWEPHNFVPTDTDNGAIF
FVLYVNGEWFAPPAAREGLKFGRTCFRRTAALDRCIRRTAALVCGAPSLGCLDGELRQLIDSCYEESWRVTELMPERPSA
EVTDFRVRKCIKLMSDSPCAEIELDHIARESGLSRPHFYRLFRSQTGVTPNLYLNTLLMERALDALVATEAPIADIGFDL
GFSSQSGFTRFFAGNVGMAPTDYRRAAKVLRA

Specific function: Transcriptional Activator Of The Superoxide Response Regulon Of E.Coli That Includes At Least 10 Genes Such As Soda, Nfo, Zwf And Micf. Binds The DNA Sequence 5'-Gcacn(7)Caa-3'. It Also Facilitates The Subsequent Binding Of RNA Polymerase To The Micf And

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: 2500 (L-broth) [C]

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 30641; Mature: 30510

Theoretical pI: Translated: 7.80; Mature: 7.80

Prosite motif: PS01124 HTH_ARAC_FAMILY_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.9 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
4.8 %Cys+Met (Translated Protein)
2.9 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSRALAVFHARFGRATVYQLNRPFNVHAHREGHLIFHVGGSPAHIDVCDRRHVIEEQSIV
CCCHHHHHHHHCCCEEEEEECCCEEEEEECCCCEEEEECCCCCEEEECCCHHHHCCCCEE
AVNPWEPHNFVPTDTDNGAIFFVLYVNGEWFAPPAAREGLKFGRTCFRRTAALDRCIRRT
EECCCCCCCCCCCCCCCCEEEEEEEECCCEECCHHHHHHHHHHHHHHHHHHHHHHHHHHH
AALVCGAPSLGCLDGELRQLIDSCYEESWRVTELMPERPSAEVTDFRVRKCIKLMSDSPC
HHHHCCCCCCCCCCHHHHHHHHHHHHCCCCHHHHCCCCCCCCHHHHHHHHHHHHHCCCCC
AEIELDHIARESGLSRPHFYRLFRSQTGVTPNLYLNTLLMERALDALVATEAPIADIGFD
CEEHHHHHHHHHCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHCCC
LGFSSQSGFTRFFAGNVGMAPTDYRRAAKVLRA
CCCCCCCCCEEEEECCCCCCCHHHHHHHHHHCC
>Mature Secondary Structure 
SRALAVFHARFGRATVYQLNRPFNVHAHREGHLIFHVGGSPAHIDVCDRRHVIEEQSIV
CCHHHHHHHHCCCEEEEEECCCEEEEEECCCCEEEEECCCCCEEEECCCHHHHCCCCEE
AVNPWEPHNFVPTDTDNGAIFFVLYVNGEWFAPPAAREGLKFGRTCFRRTAALDRCIRRT
EECCCCCCCCCCCCCCCCEEEEEEEECCCEECCHHHHHHHHHHHHHHHHHHHHHHHHHHH
AALVCGAPSLGCLDGELRQLIDSCYEESWRVTELMPERPSAEVTDFRVRKCIKLMSDSPC
HHHHCCCCCCCCCCHHHHHHHHHHHHCCCCHHHHCCCCCCCCHHHHHHHHHHHHHCCCCC
AEIELDHIARESGLSRPHFYRLFRSQTGVTPNLYLNTLLMERALDALVATEAPIADIGFD
CEEHHHHHHHHHCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHCCC
LGFSSQSGFTRFFAGNVGMAPTDYRRAAKVLRA
CCCCCCCCCEEEEECCCCCCCHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA