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The map label for this gene is 146341676

Identifier: 146341676

GI number: 146341676

Start: 4974572

End: 4975417

Strand: Reverse

Name: 146341676

Synonym: BRADO4781

Alternate gene names: NA

Gene position: 4975417-4974572 (Counterclockwise)

Preceding gene: 146341677

Following gene: 146341675

Centisome position: 66.73

GC content: 65.48

Gene sequence:

>846_bases
ATGCCGAGATATGAGCGCGCTCCACTGCTGAAGAAGTTTCGCGACATGGTCCGGCGAGGCGTGCCGATCATCGGCGGCGG
CGCCGGCACCGGCCTGTCGGCGAAATGCGAGGAGGCCGGCGGCATCGACCTGATCGTGATCTACAATTCCGGCCGCTACC
GCATGGCCGGGCGCGGCTCGCTCGCCGGGCTGATGGCCTATGGCGACGCCAACGCGATCGTCGTGGAAATGGCGAGCGAG
GTGCTCCCGGTGGTGAAGAGCACGCCGGTGCTCGCCGGCGTGAACGGTACCGATCCGTTCCGCGACATGGATGTGTTCCT
CGACCAGCTGAAGGCTCTCGGCTTCTCCGGCGTGCAGAACTTTCCGACCGTCGGACTGATCGACGGCACCTTCCGCGCCA
ATCTCGAAGAGACGGGCATCTCCTACGCTCTGGAGATCGACATGATCGGCCGCGCCCACGACAAGGATCTGCTGACGACG
CCCTATGTCTTCAACGAGGCGCAGGCGACGGGGATGGCGATCGCCGGCGCCGATATCATCGTCTGCCATCTCGGCCTGAC
CACCGGCGGCTCGATCGGCGCGCAGACAGCGCCGAAGCTCGAAGACTGTCCGGGATTGATCGACAGCTGGGCTTCCGCCG
CGCTCAGCGTCAATCCGGAAATCCTCGTGCTAGCGCATGGCGGCCCGATCGCGGAGCCGGCCGATGCGGAGTTCATCATG
AAGCACACCAAGAATTGCCACGGCTTCTATGGCGCCTCGTCGATGGAACGGTTGCCGGTGGAGCGGGCGCTGACCGAGCA
GGTGCGGCACTTCAAGGCGATCAGCTCGCGACCACGCCGCGTCTGA

Upstream 100 bases:

>100_bases
ATCACATCAACGACAATGAATTCGCAGCGACCCTCGTCGGCGCCATCCGGCCGATGCTCGGGCGGCTGCCGGTGCGGCGC
AGACGGGCGAGGTGATGGGC

Downstream 100 bases:

>100_bases
GACGACAACATGAGATCCGGCAGCAAAGGCGCCAAGCGCCGCGCGCCAGGCAAGAGACTGAGGGAGGAATGAGATGTCCG
GGGCATTGATCGGTGAGCTG

Product: putative TIM-barrel signal transduction protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 281; Mature: 280

Protein sequence:

>281_residues
MPRYERAPLLKKFRDMVRRGVPIIGGGAGTGLSAKCEEAGGIDLIVIYNSGRYRMAGRGSLAGLMAYGDANAIVVEMASE
VLPVVKSTPVLAGVNGTDPFRDMDVFLDQLKALGFSGVQNFPTVGLIDGTFRANLEETGISYALEIDMIGRAHDKDLLTT
PYVFNEAQATGMAIAGADIIVCHLGLTTGGSIGAQTAPKLEDCPGLIDSWASAALSVNPEILVLAHGGPIAEPADAEFIM
KHTKNCHGFYGASSMERLPVERALTEQVRHFKAISSRPRRV

Sequences:

>Translated_281_residues
MPRYERAPLLKKFRDMVRRGVPIIGGGAGTGLSAKCEEAGGIDLIVIYNSGRYRMAGRGSLAGLMAYGDANAIVVEMASE
VLPVVKSTPVLAGVNGTDPFRDMDVFLDQLKALGFSGVQNFPTVGLIDGTFRANLEETGISYALEIDMIGRAHDKDLLTT
PYVFNEAQATGMAIAGADIIVCHLGLTTGGSIGAQTAPKLEDCPGLIDSWASAALSVNPEILVLAHGGPIAEPADAEFIM
KHTKNCHGFYGASSMERLPVERALTEQVRHFKAISSRPRRV
>Mature_280_residues
PRYERAPLLKKFRDMVRRGVPIIGGGAGTGLSAKCEEAGGIDLIVIYNSGRYRMAGRGSLAGLMAYGDANAIVVEMASEV
LPVVKSTPVLAGVNGTDPFRDMDVFLDQLKALGFSGVQNFPTVGLIDGTFRANLEETGISYALEIDMIGRAHDKDLLTTP
YVFNEAQATGMAIAGADIIVCHLGLTTGGSIGAQTAPKLEDCPGLIDSWASAALSVNPEILVLAHGGPIAEPADAEFIMK
HTKNCHGFYGASSMERLPVERALTEQVRHFKAISSRPRRV

Specific function: Unknown

COG id: COG5564

COG function: function code R; Predicted TIM-barrel enzyme, possibly a dioxygenase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013785
- InterPro:   IPR009215 [H]

Pfam domain/function: PF09370 TIM-br_sig_trns [H]

EC number: NA

Molecular weight: Translated: 29889; Mature: 29758

Theoretical pI: Translated: 6.25; Mature: 6.25

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
5.0 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
4.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPRYERAPLLKKFRDMVRRGVPIIGGGAGTGLSAKCEEAGGIDLIVIYNSGRYRMAGRGS
CCCCCCCHHHHHHHHHHHCCCCEEECCCCCCCCCCHHCCCCEEEEEEECCCEEEECCCCC
LAGLMAYGDANAIVVEMASEVLPVVKSTPVLAGVNGTDPFRDMDVFLDQLKALGFSGVQN
EEEEEEECCCCEEEEHHHHHHHHHHHCCCEEEECCCCCCHHHHHHHHHHHHHCCCCCCCC
FPTVGLIDGTFRANLEETGISYALEIDMIGRAHDKDLLTTPYVFNEAQATGMAIAGADII
CCEEEEECCCEECCHHHCCCEEEEEEEECCCCCCCCCCCCCEEECCCCCCCEEEECCEEE
VCHLGLTTGGSIGAQTAPKLEDCPGLIDSWASAALSVNPEILVLAHGGPIAEPADAEFIM
EEEECCCCCCCCCCCCCCCCCCCCCHHHHHHHHEEECCCCEEEEECCCCCCCCCCHHHHH
KHTKNCHGFYGASSMERLPVERALTEQVRHFKAISSRPRRV
HHCCCCCCCCCCCCHHHCCHHHHHHHHHHHHHHHHCCCCCC
>Mature Secondary Structure 
PRYERAPLLKKFRDMVRRGVPIIGGGAGTGLSAKCEEAGGIDLIVIYNSGRYRMAGRGS
CCCCCCHHHHHHHHHHHCCCCEEECCCCCCCCCCHHCCCCEEEEEEECCCEEEECCCCC
LAGLMAYGDANAIVVEMASEVLPVVKSTPVLAGVNGTDPFRDMDVFLDQLKALGFSGVQN
EEEEEEECCCCEEEEHHHHHHHHHHHCCCEEEECCCCCCHHHHHHHHHHHHHCCCCCCCC
FPTVGLIDGTFRANLEETGISYALEIDMIGRAHDKDLLTTPYVFNEAQATGMAIAGADII
CCEEEEECCCEECCHHHCCCEEEEEEEECCCCCCCCCCCCCEEECCCCCCCEEEECCEEE
VCHLGLTTGGSIGAQTAPKLEDCPGLIDSWASAALSVNPEILVLAHGGPIAEPADAEFIM
EEEECCCCCCCCCCCCCCCCCCCCCHHHHHHHHEEECCCCEEEEECCCCCCCCCCHHHHH
KHTKNCHGFYGASSMERLPVERALTEQVRHFKAISSRPRRV
HHCCCCCCCCCCCCHHHCCHHHHHHHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9163424 [H]