| Definition | Bradyrhizobium sp. ORS278 chromosome, complete genome. |
|---|---|
| Accession | NC_009445 |
| Length | 7,456,587 |
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The map label for this gene is yqiK [H]
Identifier: 146341675
GI number: 146341675
Start: 4971607
End: 4974498
Strand: Reverse
Name: yqiK [H]
Synonym: BRADO4780
Alternate gene names: 146341675
Gene position: 4974498-4971607 (Counterclockwise)
Preceding gene: 146341676
Following gene: 146341674
Centisome position: 66.71
GC content: 68.33
Gene sequence:
>2892_bases ATGTCCGGGGCATTGATCGGTGAGCTGATCCTGTGGCTGATCGTTGCGATCGTCGTCATCGTGGTCGCCGTCTACATCGT CAACTGGCTGTACCACCGCTCCTCGAAGGAGGTCTCCTTCGTCCGCACCGGCTTCATGGGCGAGCGCGTGGTGATCAATG GCGGCGCCTTCGTGATGCCCTTCATTCACGACTACACGCCCGTCAACATGAACGTGCTGCCGATGGGCATCACGCGCGCG AAGCAGGATGCGGTGATCACGCGCGACCGGATGCGGGTCGACGTCGAGGCCGACTTCTACGTGCGGGTGCAGCCGACCCG CGAGGCGGTCTCGATTGCGGCTGCGACTCTCGGCCGTCGCACCCTCGAACCGGAAAAGCTGCACGCGCTGCTCTCCGGCA AGTTCATCTCCGCCCTACGCTCCGTAGCGGCCGAGATGACGATGGAGCAGATGCATGAGCAGCGCGGCGATTACGTCTCC CGCGTGAAGGCCGCCGCCTCCGAGGCGCTGGCGCAGAACGGCCTGGAACTGGAATCGGTCGCGATCACCGACCTGGACCA GACCGACCTGGAGTTCTTCAACCCGTCGAACCGGTTCGACGCCGAAGGCCTGACCCGGCTGATGGAGGACATCGAGAGCA AGCGCAAGCTGCGCAACGACATCGAGCAGGACTCGATGATCAAGATCCGCACTCGCAATCTCGAAGCCGAGCGCGAGGCG CTGGAAATCGAGCGCGAGAGCGAGACGGCGCGGCTGGAGCAGGAGCGCGACATCGAGATGCGTCGCGCCTTGCAGCGCAC GGAGGTGGCGCGCGAGCGGGCGCTGCGCGAGACCGAGGCCGAGCAGGCGCAGATTTCCGCGCGGGAGGCCATTGAGAAGG CCCGTATCGCCAATGAGCTGACCATTGCGGAGGCGCGGATCGCGGCCGAGCGCGACACGCGGCAGCGCGAGATCGAGCGC ACGCGTGCGGTCGAGGAGCGCGAACTGCTGGCCCGCGAGGACATCGAGAAGGCGCGCATCGCCAACCAGCGCGCCATCGA TGCGGCCCGCATCGAATCCGAGCGCGAGGTGCGCCAGCGCGACATCGAGCGCACCCGCACGATCGAGGAAGCGGAGATCG CGGCGCGCGAAGCGGTGGAGAAGGCGCGGATCCAGCAGGACCGCGTCGTCTCCGATGCGCGGATCGCCAATGACGAGGAG ACTCGGCGCCGCGAAATCGAGCGCACCCGCGCCATCGAGCAGGCCGAGATCGCGGCGCGCGAGGCGACCGAGAAGGCGCG CATCGCACAGACCATGATCGTCAATCTGGAGCGCATCAGCTCCGACGAACGCACCCGCGCCACCGAGATCGCGCAGGTCC GTGCCATCCAGGAGGCCGAGATCGAGGCGCAGAAGGCGGTCGAAGCCGCGCGGATCGCCCGCGAGCAGGTATTGTCGGCC GAACGCATCGCGGCCGAGCATGCGACGCGCAAGCTGGAGATCGAGCGCAATCAAGGCATCGAGATTGCCGGCATCGCCGC GCGGGAAGCGACGGACGCGAGCCGCATCGCGCAGGAGGAGCGGGTGCGAACCTTAGAGATCGCGCGCGTCAGGAGCATCG AGGAGGCCGACATCGCCTCGCGCGAAGCGATCGAGGCGGCGCGCATCGCGCAGGAGCAGGCGGTCGCCGCCAAGCGGATT CTCTCCGAGCAGGAAACGCGCAGCCTGGAGATCGCGCGGACCGAGGCCGTCGAGGCCGCCGATCTCAAGCGGCGCGAAGC GGTCGAGCGGCGGCGCATCGAGGTCGAGCTGGCGCTGGAGGCCGAGCGCATTGCCTCGTCGCGGACGCGCGAGGTGCTCA ACATCGATCAGAAGAAGGCGATCGAGCTCGCCGATGAGACGCGCGTCATCGAGCTTGCGGCGAAGCGCGCCGAGCGCATC GATGCTGATCGGCAAGTCAAGGAGGCCGAGATCGTCGCGCGCAAGCAGGTCGAGACCGCCGACGTGTCGCGCGAGCAGGC TCTGGAAGCGGTTCGCCTGGAACGTCGTCGGGCCATCGAGCAGCTCGAAGTCGCCCGCGTGCAGTCACTGCAGGAGGCCG AAATCGCTGCCCGCGAGGAGGTCGAGCGCGCCCGTATCGCCTCGGATCGCGGCCTCGACGAGGCCCGCATCGGCAGGGAG CGCGAGCTGCGCAAGCTCGAGGTCAACCGCGAGAAGGACGTCGAGACGGCGCTGATGGAGAAGGCGATCGCGCTGTACCA GAAGTCGCTGGAGGAATCCGCGGCCAAGGTGACGGCGGAGGAGGCGCGCACACGCGCGACCGAGGCCGCGGAGAAGGTGA TCACGGCACGGGAGAGCGAGATCGCCCGCCGGCGCAAGACGGTGGAAGTGCTGCTCGCCGAGAAGCACGCGGAGGAGACC CGGATTGCGGCCGAGGCCGAGCGCGTGCGCGCGGCCGTGGAGGCCGAAGCGCAGCGGCTGCTCAACGAGGCCGAGAACGT GCTGACCGACCAGGCGCGCTACTCGCTGTTCCGCCGCAAGCTGCTCGACCGCATCGAGGGCATCGTGCGCGAGAGCGTCA AGCCGATGGAGAAGATCGAAGGCATCCGCATTCTCCAGGTCGACGGCCTCAACGGCAACGGCGGCGGCGGAAATGGCGGC CGCAGCGCGACCGACGAGGTGATCGACTCCGCGCTGCGCTATCGCGTCCAGGCGCCGCTGATCGATTCCATCCTGTCCGA CATCGGCGTCGAAGGCGGCAGCCTCGCCAAGATGCCGGGCCTGATCCGCGAAGCCAGGGACATGCAGGGCATTCGCAAGG ACACCGCGGCGCGCAAGGACGCTGGCGGTGGAGCCGGCGATGGCGCGCCGCCCGAGCCGCCGGCGGATCGCGGTCCGCGC AAGAAAGGTTGA
Upstream 100 bases:
>100_bases ATCAGCTCGCGACCACGCCGCGTCTGAGACGACAACATGAGATCCGGCAGCAAAGGCGCCAAGCGCCGCGCGCCAGGCAA GAGACTGAGGGAGGAATGAG
Downstream 100 bases:
>100_bases TGCGCCATGGCGAGGGTCTACGTCTCCACCGTCGTCAACGCCCGCAACGACCGGGTGTGGGCGCGCGTGCGCGACTTCAA CGGCCTGCCGAACTGGCATC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 963; Mature: 962
Protein sequence:
>963_residues MSGALIGELILWLIVAIVVIVVAVYIVNWLYHRSSKEVSFVRTGFMGERVVINGGAFVMPFIHDYTPVNMNVLPMGITRA KQDAVITRDRMRVDVEADFYVRVQPTREAVSIAAATLGRRTLEPEKLHALLSGKFISALRSVAAEMTMEQMHEQRGDYVS RVKAAASEALAQNGLELESVAITDLDQTDLEFFNPSNRFDAEGLTRLMEDIESKRKLRNDIEQDSMIKIRTRNLEAEREA LEIERESETARLEQERDIEMRRALQRTEVARERALRETEAEQAQISAREAIEKARIANELTIAEARIAAERDTRQREIER TRAVEERELLAREDIEKARIANQRAIDAARIESEREVRQRDIERTRTIEEAEIAAREAVEKARIQQDRVVSDARIANDEE TRRREIERTRAIEQAEIAAREATEKARIAQTMIVNLERISSDERTRATEIAQVRAIQEAEIEAQKAVEAARIAREQVLSA ERIAAEHATRKLEIERNQGIEIAGIAAREATDASRIAQEERVRTLEIARVRSIEEADIASREAIEAARIAQEQAVAAKRI LSEQETRSLEIARTEAVEAADLKRREAVERRRIEVELALEAERIASSRTREVLNIDQKKAIELADETRVIELAAKRAERI DADRQVKEAEIVARKQVETADVSREQALEAVRLERRRAIEQLEVARVQSLQEAEIAAREEVERARIASDRGLDEARIGRE RELRKLEVNREKDVETALMEKAIALYQKSLEESAAKVTAEEARTRATEAAEKVITARESEIARRRKTVEVLLAEKHAEET RIAAEAERVRAAVEAEAQRLLNEAENVLTDQARYSLFRRKLLDRIEGIVRESVKPMEKIEGIRILQVDGLNGNGGGGNGG RSATDEVIDSALRYRVQAPLIDSILSDIGVEGGSLAKMPGLIREARDMQGIRKDTAARKDAGGGAGDGAPPEPPADRGPR KKG
Sequences:
>Translated_963_residues MSGALIGELILWLIVAIVVIVVAVYIVNWLYHRSSKEVSFVRTGFMGERVVINGGAFVMPFIHDYTPVNMNVLPMGITRA KQDAVITRDRMRVDVEADFYVRVQPTREAVSIAAATLGRRTLEPEKLHALLSGKFISALRSVAAEMTMEQMHEQRGDYVS RVKAAASEALAQNGLELESVAITDLDQTDLEFFNPSNRFDAEGLTRLMEDIESKRKLRNDIEQDSMIKIRTRNLEAEREA LEIERESETARLEQERDIEMRRALQRTEVARERALRETEAEQAQISAREAIEKARIANELTIAEARIAAERDTRQREIER TRAVEERELLAREDIEKARIANQRAIDAARIESEREVRQRDIERTRTIEEAEIAAREAVEKARIQQDRVVSDARIANDEE TRRREIERTRAIEQAEIAAREATEKARIAQTMIVNLERISSDERTRATEIAQVRAIQEAEIEAQKAVEAARIAREQVLSA ERIAAEHATRKLEIERNQGIEIAGIAAREATDASRIAQEERVRTLEIARVRSIEEADIASREAIEAARIAQEQAVAAKRI LSEQETRSLEIARTEAVEAADLKRREAVERRRIEVELALEAERIASSRTREVLNIDQKKAIELADETRVIELAAKRAERI DADRQVKEAEIVARKQVETADVSREQALEAVRLERRRAIEQLEVARVQSLQEAEIAAREEVERARIASDRGLDEARIGRE RELRKLEVNREKDVETALMEKAIALYQKSLEESAAKVTAEEARTRATEAAEKVITARESEIARRRKTVEVLLAEKHAEET RIAAEAERVRAAVEAEAQRLLNEAENVLTDQARYSLFRRKLLDRIEGIVRESVKPMEKIEGIRILQVDGLNGNGGGGNGG RSATDEVIDSALRYRVQAPLIDSILSDIGVEGGSLAKMPGLIREARDMQGIRKDTAARKDAGGGAGDGAPPEPPADRGPR KKG >Mature_962_residues SGALIGELILWLIVAIVVIVVAVYIVNWLYHRSSKEVSFVRTGFMGERVVINGGAFVMPFIHDYTPVNMNVLPMGITRAK QDAVITRDRMRVDVEADFYVRVQPTREAVSIAAATLGRRTLEPEKLHALLSGKFISALRSVAAEMTMEQMHEQRGDYVSR VKAAASEALAQNGLELESVAITDLDQTDLEFFNPSNRFDAEGLTRLMEDIESKRKLRNDIEQDSMIKIRTRNLEAEREAL EIERESETARLEQERDIEMRRALQRTEVARERALRETEAEQAQISAREAIEKARIANELTIAEARIAAERDTRQREIERT RAVEERELLAREDIEKARIANQRAIDAARIESEREVRQRDIERTRTIEEAEIAAREAVEKARIQQDRVVSDARIANDEET RRREIERTRAIEQAEIAAREATEKARIAQTMIVNLERISSDERTRATEIAQVRAIQEAEIEAQKAVEAARIAREQVLSAE RIAAEHATRKLEIERNQGIEIAGIAAREATDASRIAQEERVRTLEIARVRSIEEADIASREAIEAARIAQEQAVAAKRIL SEQETRSLEIARTEAVEAADLKRREAVERRRIEVELALEAERIASSRTREVLNIDQKKAIELADETRVIELAAKRAERID ADRQVKEAEIVARKQVETADVSREQALEAVRLERRRAIEQLEVARVQSLQEAEIAAREEVERARIASDRGLDEARIGRER ELRKLEVNREKDVETALMEKAIALYQKSLEESAAKVTAEEARTRATEAAEKVITARESEIARRRKTVEVLLAEKHAEETR IAAEAERVRAAVEAEAQRLLNEAENVLTDQARYSLFRRKLLDRIEGIVRESVKPMEKIEGIRILQVDGLNGNGGGGNGGR SATDEVIDSALRYRVQAPLIDSILSDIGVEGGSLAKMPGLIREARDMQGIRKDTAARKDAGGGAGDGAPPEPPADRGPRK KG
Specific function: Unknown
COG id: COG2268
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cell inner membrane; Single-pass membrane protein [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: To B.subtilis yuaG and Synechocystis PCC 6803 sll1021 [H]
Homologues:
Organism=Escherichia coli, GI1789430, Length=318, Percent_Identity=43.3962264150943, Blast_Score=257, Evalue=2e-69,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001107 [H]
Pfam domain/function: PF01145 Band_7 [H]
EC number: NA
Molecular weight: Translated: 108461; Mature: 108330
Theoretical pI: Translated: 5.09; Mature: 5.09
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 1.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSGALIGELILWLIVAIVVIVVAVYIVNWLYHRSSKEVSFVRTGFMGERVVINGGAFVMP CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHCCCCCEEEEECCCEEEC FIHDYTPVNMNVLPMGITRAKQDAVITRDRMRVDVEADFYVRVQPTREAVSIAAATLGRR HHHCCCCCCCEEEECCHHHHHHHHHEEHHHEEEEECCCEEEEECCHHHHHHHHHHHHHCC TLEPEKLHALLSGKFISALRSVAAEMTMEQMHEQRGDYVSRVKAAASEALAQNGLELESV CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEE AITDLDQTDLEFFNPSNRFDAEGLTRLMEDIESKRKLRNDIEQDSMIKIRTRNLEAEREA EECCCCCCCHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCHHHHHH LEIERESETARLEQERDIEMRRALQRTEVARERALRETEAEQAQISAREAIEKARIANEL HHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH TIAEARIAAERDTRQREIERTRAVEERELLAREDIEKARIANQRAIDAARIESEREVRQR HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH DIERTRTIEEAEIAAREAVEKARIQQDRVVSDARIANDEETRRREIERTRAIEQAEIAAR HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHH EATEKARIAQTMIVNLERISSDERTRATEIAQVRAIQEAEIEAQKAVEAARIAREQVLSA HHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ERIAAEHATRKLEIERNQGIEIAGIAAREATDASRIAQEERVRTLEIARVRSIEEADIAS HHHHHHHHHHEEEEECCCCCEEEEECHHHHCCHHHHHHHHHHHHHHHHHHHCCHHHHHHH REAIEAARIAQEQAVAAKRILSEQETRSLEIARTEAVEAADLKRREAVERRRIEVELALE HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEHH AERIASSRTREVLNIDQKKAIELADETRVIELAAKRAERIDADRQVKEAEIVARKQVETA HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHH DVSREQALEAVRLERRRAIEQLEVARVQSLQEAEIAAREEVERARIASDRGLDEARIGRE HCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHCCHH RELRKLEVNREKDVETALMEKAIALYQKSLEESAAKVTAEEARTRATEAAEKVITARESE HHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH IARRRKTVEVLLAEKHAEETRIAAEAERVRAAVEAEAQRLLNEAENVLTDQARYSLFRRK HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LLDRIEGIVRESVKPMEKIEGIRILQVDGLNGNGGGGNGGRSATDEVIDSALRYRVQAPL HHHHHHHHHHHHCCHHHHHCCEEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHH IDSILSDIGVEGGSLAKMPGLIREARDMQGIRKDTAARKDAGGGAGDGAPPEPPADRGPR HHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCC KKG CCC >Mature Secondary Structure SGALIGELILWLIVAIVVIVVAVYIVNWLYHRSSKEVSFVRTGFMGERVVINGGAFVMP CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHCCCCCEEEEECCCEEEC FIHDYTPVNMNVLPMGITRAKQDAVITRDRMRVDVEADFYVRVQPTREAVSIAAATLGRR HHHCCCCCCCEEEECCHHHHHHHHHEEHHHEEEEECCCEEEEECCHHHHHHHHHHHHHCC TLEPEKLHALLSGKFISALRSVAAEMTMEQMHEQRGDYVSRVKAAASEALAQNGLELESV CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEE AITDLDQTDLEFFNPSNRFDAEGLTRLMEDIESKRKLRNDIEQDSMIKIRTRNLEAEREA EECCCCCCCHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCHHHHHH LEIERESETARLEQERDIEMRRALQRTEVARERALRETEAEQAQISAREAIEKARIANEL HHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH TIAEARIAAERDTRQREIERTRAVEERELLAREDIEKARIANQRAIDAARIESEREVRQR HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH DIERTRTIEEAEIAAREAVEKARIQQDRVVSDARIANDEETRRREIERTRAIEQAEIAAR HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHH EATEKARIAQTMIVNLERISSDERTRATEIAQVRAIQEAEIEAQKAVEAARIAREQVLSA HHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ERIAAEHATRKLEIERNQGIEIAGIAAREATDASRIAQEERVRTLEIARVRSIEEADIAS HHHHHHHHHHEEEEECCCCCEEEEECHHHHCCHHHHHHHHHHHHHHHHHHHCCHHHHHHH REAIEAARIAQEQAVAAKRILSEQETRSLEIARTEAVEAADLKRREAVERRRIEVELALE HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEHH AERIASSRTREVLNIDQKKAIELADETRVIELAAKRAERIDADRQVKEAEIVARKQVETA HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHH DVSREQALEAVRLERRRAIEQLEVARVQSLQEAEIAAREEVERARIASDRGLDEARIGRE HCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHCCHH RELRKLEVNREKDVETALMEKAIALYQKSLEESAAKVTAEEARTRATEAAEKVITARESE HHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH IARRRKTVEVLLAEKHAEETRIAAEAERVRAAVEAEAQRLLNEAENVLTDQARYSLFRRK HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LLDRIEGIVRESVKPMEKIEGIRILQVDGLNGNGGGGNGGRSATDEVIDSALRYRVQAPL HHHHHHHHHHHHCCHHHHHCCEEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHH IDSILSDIGVEGGSLAKMPGLIREARDMQGIRKDTAARKDAGGGAGDGAPPEPPADRGPR HHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCC KKG CCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 9205837; 9278503 [H]