| Definition | Bradyrhizobium sp. ORS278 chromosome, complete genome. |
|---|---|
| Accession | NC_009445 |
| Length | 7,456,587 |
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The map label for this gene is 146341571
Identifier: 146341571
GI number: 146341571
Start: 4862767
End: 4863351
Strand: Direct
Name: 146341571
Synonym: BRADO4672
Alternate gene names: NA
Gene position: 4862767-4863351 (Clockwise)
Preceding gene: 146341570
Following gene: 146341573
Centisome position: 65.21
GC content: 64.62
Gene sequence:
>585_bases ATGACCCAGCCCGCCATCAGCCGCTTCCCCGTCCCCGCGATCGACGCGCTGCCGGAGGATATCCGCACCCGCCTTCTTGC CGTGCAGGAGAAGAGCGGCTTCGTGCCGAACGTCTTTCTGACCCTCGCACACCGGCCTGACGAGTTCCGCGCCTTCTTCG CCTATCACGACGCGCTGATGGAGAAGGACGGCGGGCTGACCAAGGCCGAGCGCGAGATGATCGTGGTTGCCACGTCGAGC GCCAACCAGTGCCAGTATTGCGTGATCGCCCATGGCGCGATCCTGCGCATCCGCGCCAAGAACCCGCTGATCGCCGACCA GGTCGCGATCAATTACCGCAAGGCCGATATCACGCCGCGACAGCGTACGATGCTCGATTTCGCGATGAAGGTGGCGCTGG AGGCGCACACCGTCGGCGAGGCCGATTTCAAGACGCTGGCGGAGCACGGCTTCAGCGACGACGATGTCTGGGACATCGCC GCGATCGCGGCCTTCTTCGCGCTGTCGAACCGGATGGCCAATGTCACCGGCATGCGGCCCAATGACGAGTTCTATCTGAT GGGGCGGCTGCCGAAGGCGAAGTAG
Upstream 100 bases:
>100_bases GGTCGGCCACCGTCGAGGTGCTGAACTGAGCGCGGCCGTTGCGCCCCCGTGCTGATCGACTAAGGTTCGCTCCCTGCCAC GCCATGCCGGATCGTACGCC
Downstream 100 bases:
>100_bases CGGATCAGTCGTCCGACGCGGGCCCGCACCAGCCGGGCAAATAGACCGCGTCATGGCTCTTGGCGAGCGCGAGCGCGTGC TCCATGGCAGCGGCGAACTG
Product: putative peroxidase-like protein
Products: NA
Alternate protein names: Alkylhydroperoxidase AhpD Family Core Domain Protein; Peroxidase-Like Protein; Alkylhydroperoxidase; Alkylhydroperoxidase AhpD Core; Peroxidase-Like; 4-Carboxymuconolactone Decarboxylase; Alkylhydroperoxidase AhpD Domain Protein; Peroxidase-Related Subfamily; Carboxymuconolactone Decarboxylase; Peroxidase Related Protein; Alkylhydroperoxidase Ahpd Family Core Domain; Alkylhydroperoxidase AhpD; Peroxidase-Related Protein
Number of amino acids: Translated: 194; Mature: 193
Protein sequence:
>194_residues MTQPAISRFPVPAIDALPEDIRTRLLAVQEKSGFVPNVFLTLAHRPDEFRAFFAYHDALMEKDGGLTKAEREMIVVATSS ANQCQYCVIAHGAILRIRAKNPLIADQVAINYRKADITPRQRTMLDFAMKVALEAHTVGEADFKTLAEHGFSDDDVWDIA AIAAFFALSNRMANVTGMRPNDEFYLMGRLPKAK
Sequences:
>Translated_194_residues MTQPAISRFPVPAIDALPEDIRTRLLAVQEKSGFVPNVFLTLAHRPDEFRAFFAYHDALMEKDGGLTKAEREMIVVATSS ANQCQYCVIAHGAILRIRAKNPLIADQVAINYRKADITPRQRTMLDFAMKVALEAHTVGEADFKTLAEHGFSDDDVWDIA AIAAFFALSNRMANVTGMRPNDEFYLMGRLPKAK >Mature_193_residues TQPAISRFPVPAIDALPEDIRTRLLAVQEKSGFVPNVFLTLAHRPDEFRAFFAYHDALMEKDGGLTKAEREMIVVATSSA NQCQYCVIAHGAILRIRAKNPLIADQVAINYRKADITPRQRTMLDFAMKVALEAHTVGEADFKTLAEHGFSDDDVWDIAA IAAFFALSNRMANVTGMRPNDEFYLMGRLPKAK
Specific function: Unknown
COG id: COG2128
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 21642; Mature: 21511
Theoretical pI: Translated: 7.06; Mature: 7.06
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 4.1 %Met (Translated Protein) 5.2 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 3.6 %Met (Mature Protein) 4.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTQPAISRFPVPAIDALPEDIRTRLLAVQEKSGFVPNVFLTLAHRPDEFRAFFAYHDALM CCCCCCCCCCCCHHHCCCHHHHHHHHHHHCCCCCCCEEEEEEECCCHHHHHHHHHHHHHH EKDGGLTKAEREMIVVATSSANQCQYCVIAHGAILRIRAKNPLIADQVAINYRKADITPR HCCCCCCCCCCCEEEEEECCCCCCCEEEEECCEEEEEECCCCEEEHHHEEEEEECCCCHH QRTMLDFAMKVALEAHTVGEADFKTLAEHGFSDDDVWDIAAIAAFFALSNRMANVTGMRP HHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCHHHCCCCCC NDEFYLMGRLPKAK CCCEEEEECCCCCC >Mature Secondary Structure TQPAISRFPVPAIDALPEDIRTRLLAVQEKSGFVPNVFLTLAHRPDEFRAFFAYHDALM CCCCCCCCCCCHHHCCCHHHHHHHHHHHCCCCCCCEEEEEEECCCHHHHHHHHHHHHHH EKDGGLTKAEREMIVVATSSANQCQYCVIAHGAILRIRAKNPLIADQVAINYRKADITPR HCCCCCCCCCCCEEEEEECCCCCCCEEEEECCEEEEEECCCCEEEHHHEEEEEECCCCHH QRTMLDFAMKVALEAHTVGEADFKTLAEHGFSDDDVWDIAAIAAFFALSNRMANVTGMRP HHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCHHHCCCCCC NDEFYLMGRLPKAK CCCEEEEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA