Definition Bradyrhizobium sp. ORS278 chromosome, complete genome.
Accession NC_009445
Length 7,456,587

Click here to switch to the map view.

The map label for this gene is 146341571

Identifier: 146341571

GI number: 146341571

Start: 4862767

End: 4863351

Strand: Direct

Name: 146341571

Synonym: BRADO4672

Alternate gene names: NA

Gene position: 4862767-4863351 (Clockwise)

Preceding gene: 146341570

Following gene: 146341573

Centisome position: 65.21

GC content: 64.62

Gene sequence:

>585_bases
ATGACCCAGCCCGCCATCAGCCGCTTCCCCGTCCCCGCGATCGACGCGCTGCCGGAGGATATCCGCACCCGCCTTCTTGC
CGTGCAGGAGAAGAGCGGCTTCGTGCCGAACGTCTTTCTGACCCTCGCACACCGGCCTGACGAGTTCCGCGCCTTCTTCG
CCTATCACGACGCGCTGATGGAGAAGGACGGCGGGCTGACCAAGGCCGAGCGCGAGATGATCGTGGTTGCCACGTCGAGC
GCCAACCAGTGCCAGTATTGCGTGATCGCCCATGGCGCGATCCTGCGCATCCGCGCCAAGAACCCGCTGATCGCCGACCA
GGTCGCGATCAATTACCGCAAGGCCGATATCACGCCGCGACAGCGTACGATGCTCGATTTCGCGATGAAGGTGGCGCTGG
AGGCGCACACCGTCGGCGAGGCCGATTTCAAGACGCTGGCGGAGCACGGCTTCAGCGACGACGATGTCTGGGACATCGCC
GCGATCGCGGCCTTCTTCGCGCTGTCGAACCGGATGGCCAATGTCACCGGCATGCGGCCCAATGACGAGTTCTATCTGAT
GGGGCGGCTGCCGAAGGCGAAGTAG

Upstream 100 bases:

>100_bases
GGTCGGCCACCGTCGAGGTGCTGAACTGAGCGCGGCCGTTGCGCCCCCGTGCTGATCGACTAAGGTTCGCTCCCTGCCAC
GCCATGCCGGATCGTACGCC

Downstream 100 bases:

>100_bases
CGGATCAGTCGTCCGACGCGGGCCCGCACCAGCCGGGCAAATAGACCGCGTCATGGCTCTTGGCGAGCGCGAGCGCGTGC
TCCATGGCAGCGGCGAACTG

Product: putative peroxidase-like protein

Products: NA

Alternate protein names: Alkylhydroperoxidase AhpD Family Core Domain Protein; Peroxidase-Like Protein; Alkylhydroperoxidase; Alkylhydroperoxidase AhpD Core; Peroxidase-Like; 4-Carboxymuconolactone Decarboxylase; Alkylhydroperoxidase AhpD Domain Protein; Peroxidase-Related Subfamily; Carboxymuconolactone Decarboxylase; Peroxidase Related Protein; Alkylhydroperoxidase Ahpd Family Core Domain; Alkylhydroperoxidase AhpD; Peroxidase-Related Protein

Number of amino acids: Translated: 194; Mature: 193

Protein sequence:

>194_residues
MTQPAISRFPVPAIDALPEDIRTRLLAVQEKSGFVPNVFLTLAHRPDEFRAFFAYHDALMEKDGGLTKAEREMIVVATSS
ANQCQYCVIAHGAILRIRAKNPLIADQVAINYRKADITPRQRTMLDFAMKVALEAHTVGEADFKTLAEHGFSDDDVWDIA
AIAAFFALSNRMANVTGMRPNDEFYLMGRLPKAK

Sequences:

>Translated_194_residues
MTQPAISRFPVPAIDALPEDIRTRLLAVQEKSGFVPNVFLTLAHRPDEFRAFFAYHDALMEKDGGLTKAEREMIVVATSS
ANQCQYCVIAHGAILRIRAKNPLIADQVAINYRKADITPRQRTMLDFAMKVALEAHTVGEADFKTLAEHGFSDDDVWDIA
AIAAFFALSNRMANVTGMRPNDEFYLMGRLPKAK
>Mature_193_residues
TQPAISRFPVPAIDALPEDIRTRLLAVQEKSGFVPNVFLTLAHRPDEFRAFFAYHDALMEKDGGLTKAEREMIVVATSSA
NQCQYCVIAHGAILRIRAKNPLIADQVAINYRKADITPRQRTMLDFAMKVALEAHTVGEADFKTLAEHGFSDDDVWDIAA
IAAFFALSNRMANVTGMRPNDEFYLMGRLPKAK

Specific function: Unknown

COG id: COG2128

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 21642; Mature: 21511

Theoretical pI: Translated: 7.06; Mature: 7.06

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
4.1 %Met     (Translated Protein)
5.2 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
4.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTQPAISRFPVPAIDALPEDIRTRLLAVQEKSGFVPNVFLTLAHRPDEFRAFFAYHDALM
CCCCCCCCCCCCHHHCCCHHHHHHHHHHHCCCCCCCEEEEEEECCCHHHHHHHHHHHHHH
EKDGGLTKAEREMIVVATSSANQCQYCVIAHGAILRIRAKNPLIADQVAINYRKADITPR
HCCCCCCCCCCCEEEEEECCCCCCCEEEEECCEEEEEECCCCEEEHHHEEEEEECCCCHH
QRTMLDFAMKVALEAHTVGEADFKTLAEHGFSDDDVWDIAAIAAFFALSNRMANVTGMRP
HHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCHHHCCCCCC
NDEFYLMGRLPKAK
CCCEEEEECCCCCC
>Mature Secondary Structure 
TQPAISRFPVPAIDALPEDIRTRLLAVQEKSGFVPNVFLTLAHRPDEFRAFFAYHDALM
CCCCCCCCCCCHHHCCCHHHHHHHHHHHCCCCCCCEEEEEEECCCHHHHHHHHHHHHHH
EKDGGLTKAEREMIVVATSSANQCQYCVIAHGAILRIRAKNPLIADQVAINYRKADITPR
HCCCCCCCCCCCEEEEEECCCCCCCEEEEECCEEEEEECCCCEEEHHHEEEEEECCCCHH
QRTMLDFAMKVALEAHTVGEADFKTLAEHGFSDDDVWDIAAIAAFFALSNRMANVTGMRP
HHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCHHHCCCCCC
NDEFYLMGRLPKAK
CCCEEEEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA