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The map label for this gene is ydhJ [H]

Identifier: 146341570

GI number: 146341570

Start: 4861829

End: 4862695

Strand: Direct

Name: ydhJ [H]

Synonym: BRADO4671

Alternate gene names: 146341570

Gene position: 4861829-4862695 (Clockwise)

Preceding gene: 146341569

Following gene: 146341571

Centisome position: 65.2

GC content: 68.4

Gene sequence:

>867_bases
GTGAAAAGCACCTTCGCCCTGCTCGGCCGCGTGGCGGTCACCGCGGCCGCTGTCGCCGCAGCGATCCTGGTCGGCACCTA
TCTGTGGGGCTACTACATGAAGGCGCCGTGGACACGCGACGGCCGCGTCCGCGCCGACATCGTCCAGGTCGCGCCTGACG
TTTCCGGCTTCGTCACCGAGGTTCTGGTGCGCGACAATCAGCCGGTGCATCAGGGCGACGTCATTTTCCGGATCGACCGC
GCCCGCTTCAAGCTCGCGCTGCAGCAGGCCGACGCCGTGGTCGCCGGCCGTCTCGCCACGCTGAACCAGGCCAATGCCGA
CCTCGACCGCTACCGCTCGCTGACCACCGAGGCGGTGTCGCAGCAGAAGCAGGAGCAGGTGCTGGCCACCCAGCAGCAGG
CGCAGGCATCCTATGACCAGGCGCTGGCCGATCAGGCTGTCGCGAAGCTCAATCTCGAGCGCAGCGATGTGCATGCGCCG
GTCAACGGCGTGATCACCAACATGGACGTGCGTCCGGGGGCCTATGTCAGCGCCGGCAAGGGCGTGATGGCGCTGGTCGA
CACCGACACGCTGCATGTCGAGGGCTATTTCGAGGAGACCAAGCTGCCGCGCATCCGCGTCGGCGCGCCGGTGCGCATTC
GCCTGATGGGCACCGGCGAGGTGCTGACAGGCCATGTCGAGAGTATCGCGGCAGGGATCGAGGACCGCGATCGTGCCGAG
GGCGCGAGCCTGCTCGCCAACGTGACCCCGACCTTCAACTGGGTCCGGCTGGCGCAGCGCGTCCCGGTGCGGATCGCGCT
CGATGATACGTCGCGGCGCAGCGAACTCGTGGCGGGACGGTCGGCCACCGTCGAGGTGCTGAACTGA

Upstream 100 bases:

>100_bases
TCGGCGTTTACCGCCTGGTCTGGCACCCCGCCCTGTTCGACTTCGCATTGTATGTCTGCGTGCTCGGCGGCATCGTCTAT
CTCGCTTCGGAGTGGTCCTC

Downstream 100 bases:

>100_bases
GCGCGGCCGTTGCGCCCCCGTGCTGATCGACTAAGGTTCGCTCCCTGCCACGCCATGCCGGATCGTACGCCATGACCCAG
CCCGCCATCAGCCGCTTCCC

Product: multidrug resistance membrane protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 288; Mature: 288

Protein sequence:

>288_residues
MKSTFALLGRVAVTAAAVAAAILVGTYLWGYYMKAPWTRDGRVRADIVQVAPDVSGFVTEVLVRDNQPVHQGDVIFRIDR
ARFKLALQQADAVVAGRLATLNQANADLDRYRSLTTEAVSQQKQEQVLATQQQAQASYDQALADQAVAKLNLERSDVHAP
VNGVITNMDVRPGAYVSAGKGVMALVDTDTLHVEGYFEETKLPRIRVGAPVRIRLMGTGEVLTGHVESIAAGIEDRDRAE
GASLLANVTPTFNWVRLAQRVPVRIALDDTSRRSELVAGRSATVEVLN

Sequences:

>Translated_288_residues
MKSTFALLGRVAVTAAAVAAAILVGTYLWGYYMKAPWTRDGRVRADIVQVAPDVSGFVTEVLVRDNQPVHQGDVIFRIDR
ARFKLALQQADAVVAGRLATLNQANADLDRYRSLTTEAVSQQKQEQVLATQQQAQASYDQALADQAVAKLNLERSDVHAP
VNGVITNMDVRPGAYVSAGKGVMALVDTDTLHVEGYFEETKLPRIRVGAPVRIRLMGTGEVLTGHVESIAAGIEDRDRAE
GASLLANVTPTFNWVRLAQRVPVRIALDDTSRRSELVAGRSATVEVLN
>Mature_288_residues
MKSTFALLGRVAVTAAAVAAAILVGTYLWGYYMKAPWTRDGRVRADIVQVAPDVSGFVTEVLVRDNQPVHQGDVIFRIDR
ARFKLALQQADAVVAGRLATLNQANADLDRYRSLTTEAVSQQKQEQVLATQQQAQASYDQALADQAVAKLNLERSDVHAP
VNGVITNMDVRPGAYVSAGKGVMALVDTDTLHVEGYFEETKLPRIRVGAPVRIRLMGTGEVLTGHVESIAAGIEDRDRAE
GASLLANVTPTFNWVRLAQRVPVRIALDDTSRRSELVAGRSATVEVLN

Specific function: Unknown

COG id: COG1566

COG function: function code V; Multidrug resistance efflux pump

Gene ontology:

Cell location: Membrane; Single-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family [H]

Homologues:

Organism=Escherichia coli, GI87081951, Length=266, Percent_Identity=41.7293233082707, Blast_Score=215, Evalue=2e-57,
Organism=Escherichia coli, GI1789637, Length=286, Percent_Identity=37.7622377622378, Blast_Score=189, Evalue=2e-49,
Organism=Escherichia coli, GI1790519, Length=288, Percent_Identity=31.25, Blast_Score=119, Evalue=2e-28,
Organism=Escherichia coli, GI1789041, Length=297, Percent_Identity=26.5993265993266, Blast_Score=86, Evalue=2e-18,
Organism=Escherichia coli, GI1788711, Length=280, Percent_Identity=28.2142857142857, Blast_Score=82, Evalue=3e-17,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006143 [H]

Pfam domain/function: PF00529 HlyD [H]

EC number: NA

Molecular weight: Translated: 31259; Mature: 31259

Theoretical pI: Translated: 7.82; Mature: 7.82

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
1.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKSTFALLGRVAVTAAAVAAAILVGTYLWGYYMKAPWTRDGRVRADIVQVAPDVSGFVTE
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEHHHHHCCCHHHHHHH
VLVRDNQPVHQGDVIFRIDRARFKLALQQADAVVAGRLATLNQANADLDRYRSLTTEAVS
HHHCCCCCCCCCCEEEEECHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHH
QQKQEQVLATQQQAQASYDQALADQAVAKLNLERSDVHAPVNGVITNMDVRPGAYVSAGK
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCCCCCCEEEECCCCCCCEEECCC
GVMALVDTDTLHVEGYFEETKLPRIRVGAPVRIRLMGTGEVLTGHVESIAAGIEDRDRAE
CEEEEEECCEEEEEEEECCCCCCEEEECCCEEEEEEECCCHHHHHHHHHHHCCCCHHHHC
GASLLANVTPTFNWVRLAQRVPVRIALDDTSRRSELVAGRSATVEVLN
CHHHEEECCCCHHHHHHHHHCCEEEEECCCCCHHHHHCCCCCEEEEEC
>Mature Secondary Structure
MKSTFALLGRVAVTAAAVAAAILVGTYLWGYYMKAPWTRDGRVRADIVQVAPDVSGFVTE
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEHHHHHCCCHHHHHHH
VLVRDNQPVHQGDVIFRIDRARFKLALQQADAVVAGRLATLNQANADLDRYRSLTTEAVS
HHHCCCCCCCCCCEEEEECHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHH
QQKQEQVLATQQQAQASYDQALADQAVAKLNLERSDVHAPVNGVITNMDVRPGAYVSAGK
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCCCCCCEEEECCCCCCCEEECCC
GVMALVDTDTLHVEGYFEETKLPRIRVGAPVRIRLMGTGEVLTGHVESIAAGIEDRDRAE
CEEEEEECCEEEEEEEECCCCCCEEEECCCEEEEEEECCCHHHHHHHHHHHCCCCHHHHC
GASLLANVTPTFNWVRLAQRVPVRIALDDTSRRSELVAGRSATVEVLN
CHHHEEECCCCHHHHHHHHHCCEEEEECCCCCHHHHHCCCCCEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9097039; 9278503 [H]