| Definition | Bradyrhizobium sp. ORS278 chromosome, complete genome. |
|---|---|
| Accession | NC_009445 |
| Length | 7,456,587 |
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The map label for this gene is yegM [C]
Identifier: 146341500
GI number: 146341500
Start: 4790866
End: 4791861
Strand: Direct
Name: yegM [C]
Synonym: BRADO4594
Alternate gene names: 146341500
Gene position: 4790866-4791861 (Clockwise)
Preceding gene: 146341497
Following gene: 146341501
Centisome position: 64.25
GC content: 67.47
Gene sequence:
>996_bases ATGCGCGGATTTTGGCTTCTGATCGCCGCCATGGCGTGGCAGATGACTTGGCAAACAATTGCGTCTCAAGCCGAAACGCT GACGGTGACCCCGCGTCAGGTCGCCGACGAGAAGGCGGTGTTCGCGACCGTGGAAAGCGTCAGCGTCGTTCCGGCGCGCG GTCGCATCGGCGGCACCATCGCGCAGCTTTCGGTGCGCGAAGGCGACCCGGTCAAGCGAGGCCAACCGATCGCCTTGATC GGCGACGAGAAGCTCGCGCTGCAGCTCAAGTCGCTCGACGCTCAGATCGAGGCGCTGCAGGCGCAGGCCAACCAGGCGCA GATCGACTTCACCCGCACCGAGGGTCTGGTCGAGCGCGGCACCCTGCCCCGCGTCAAGCTCGACGAGACGCGCACCGCGC TCAACGTCGCGGAGAATTCGCTGCGGGCCAAAACCGCCGAGCGCGCGGTGGTCAACCAGCAGATGAGCGAAGGCCAGGTG CTGGCGCCCGACGACGGTCGCGTGCTGAAGAAACTGGTGACGGTCGGCTCGGTGGTCCTGCCCGGCGATCCCGTAGTCAC GGTGGCGCAGCAGAACTTCAAGCTGCGGCTGCGCGTGCCCGAGCGCCATGCGCTGTTCCTGAAGGCGGGCGACAAGATCC GTCTGGATGGCGCCGAGTTCGGCGAGAGCGGCGACAAATGGGGCGTGATCGACCTCGTCTATCCGCAGATCGAGGAAGGC CGCGTCGTCGCCGACGCGATCGTCCCGGGCCTCGGCCAGTATTTCGTCGGCGACCGGCTGCGGGTATGGATCTCCGGCGG CCAGCGCGAGGCCTATGTCATCCCCTCCCGCTATGTCATCACCCGCTTCGGCATCGACACCGTCCAGCTGCAGCAGGGCG CGCAACAGGTGAGCGTGCCGGTGCAGCGCGGCCGCGCGCTGCCGAGCGCCGATCTTCCCGATGGACTTGAAATCCTGTCC GGCCTGCGCGCCGGCGACCAATTGGTGCAGCCGTGA
Upstream 100 bases:
>100_bases GCCACCCGTGCCAGCAGACTGAAAGTGCCGCCGAGCCCTTGAAGATATATTCGTAAATTCGTATATACGCAATAGATAGT TTCAAACGAGCGGGTAAGTG
Downstream 100 bases:
>100_bases AACTCGGGCTCTCAGGCAAGCTGACCAAGGCGACCATCGCCTCGCCGTTGACGCCGCTGTTCCTGCTCGCCTCGCTCGTC GTCGGCCTCATCGCGGTGGT
Product: RND family efflux pump membrane fusion protein
Products: NA
Alternate protein names: Efflux Transporter RND Family MFP Subunit; Secretion Protein HlyD; HlyD Family Secretion Protein; RND Family Efflux Pump Membrane Fusion Protein; Acriflavin Resistance Protein E; AcrA/AcrE Family Protein; Efflux Transporter Rnd Family Mfp Subunit; RND Membrane Fusion Protein; RND Family Resistance-Nodulation- Efflux Pump; Acriflavin Resistance Protein AcrE; RND Efflux System Membrane-Fusion Protein; Auxiliary Transport Protein MFP Family; Auxiliary Transport Protein Membrane Fusion Protein Family; RND Family Efflux Transporter Subunit MFP
Number of amino acids: Translated: 331; Mature: 331
Protein sequence:
>331_residues MRGFWLLIAAMAWQMTWQTIASQAETLTVTPRQVADEKAVFATVESVSVVPARGRIGGTIAQLSVREGDPVKRGQPIALI GDEKLALQLKSLDAQIEALQAQANQAQIDFTRTEGLVERGTLPRVKLDETRTALNVAENSLRAKTAERAVVNQQMSEGQV LAPDDGRVLKKLVTVGSVVLPGDPVVTVAQQNFKLRLRVPERHALFLKAGDKIRLDGAEFGESGDKWGVIDLVYPQIEEG RVVADAIVPGLGQYFVGDRLRVWISGGQREAYVIPSRYVITRFGIDTVQLQQGAQQVSVPVQRGRALPSADLPDGLEILS GLRAGDQLVQP
Sequences:
>Translated_331_residues MRGFWLLIAAMAWQMTWQTIASQAETLTVTPRQVADEKAVFATVESVSVVPARGRIGGTIAQLSVREGDPVKRGQPIALI GDEKLALQLKSLDAQIEALQAQANQAQIDFTRTEGLVERGTLPRVKLDETRTALNVAENSLRAKTAERAVVNQQMSEGQV LAPDDGRVLKKLVTVGSVVLPGDPVVTVAQQNFKLRLRVPERHALFLKAGDKIRLDGAEFGESGDKWGVIDLVYPQIEEG RVVADAIVPGLGQYFVGDRLRVWISGGQREAYVIPSRYVITRFGIDTVQLQQGAQQVSVPVQRGRALPSADLPDGLEILS GLRAGDQLVQP >Mature_331_residues MRGFWLLIAAMAWQMTWQTIASQAETLTVTPRQVADEKAVFATVESVSVVPARGRIGGTIAQLSVREGDPVKRGQPIALI GDEKLALQLKSLDAQIEALQAQANQAQIDFTRTEGLVERGTLPRVKLDETRTALNVAENSLRAKTAERAVVNQQMSEGQV LAPDDGRVLKKLVTVGSVVLPGDPVVTVAQQNFKLRLRVPERHALFLKAGDKIRLDGAEFGESGDKWGVIDLVYPQIEEG RVVADAIVPGLGQYFVGDRLRVWISGGQREAYVIPSRYVITRFGIDTVQLQQGAQQVSVPVQRGRALPSADLPDGLEILS GLRAGDQLVQP
Specific function: Unknown
COG id: COG0845
COG function: function code M; Membrane-fusion protein
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 35997; Mature: 35997
Theoretical pI: Translated: 7.53; Mature: 7.53
Prosite motif: PS00430 TONB_DEPENDENT_REC_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 1.2 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 1.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRGFWLLIAAMAWQMTWQTIASQAETLTVTPRQVADEKAVFATVESVSVVPARGRIGGTI CCHHHHHHHHHHHHHHHHHHHCCCCEEEECHHHHCCCHHEEEEECCEEEEECCCCCCCEE AQLSVREGDPVKRGQPIALIGDEKLALQLKSLDAQIEALQAQANQAQIDFTRTEGLVERG EEEEECCCCCCCCCCCEEEECCCEEEEEEHHHHHHHHHHHHCCCCEEEEEEHHCCHHHCC TLPRVKLDETRTALNVAENSLRAKTAERAVVNQQMSEGQVLAPDDGRVLKKLVTVGSVVL CCCCEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEECCCCHHHHHHHHHHCCEEE PGDPVVTVAQQNFKLRLRVPERHALFLKAGDKIRLDGAEFGESGDKWGVIDLVYPQIEEG CCCCEEEEECCCEEEEEECCCCEEEEEECCCEEEECCHHCCCCCCCEEEEEEECCCCCCC RVVADAIVPGLGQYFVGDRLRVWISGGQREAYVIPSRYVITRFGIDTVQLQQGAQQVSVP CEEEHHHHCCCHHHHHCCEEEEEEECCCEEEEECCCEEEEEEECCCHHHHHHCHHHCCCC VQRGRALPSADLPDGLEILSGLRAGDQLVQP HHHCCCCCCCCCCCHHHHHHHCCCCHHHCCC >Mature Secondary Structure MRGFWLLIAAMAWQMTWQTIASQAETLTVTPRQVADEKAVFATVESVSVVPARGRIGGTI CCHHHHHHHHHHHHHHHHHHHCCCCEEEECHHHHCCCHHEEEEECCEEEEECCCCCCCEE AQLSVREGDPVKRGQPIALIGDEKLALQLKSLDAQIEALQAQANQAQIDFTRTEGLVERG EEEEECCCCCCCCCCCEEEECCCEEEEEEHHHHHHHHHHHHCCCCEEEEEEHHCCHHHCC TLPRVKLDETRTALNVAENSLRAKTAERAVVNQQMSEGQVLAPDDGRVLKKLVTVGSVVL CCCCEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEECCCCHHHHHHHHHHCCEEE PGDPVVTVAQQNFKLRLRVPERHALFLKAGDKIRLDGAEFGESGDKWGVIDLVYPQIEEG CCCCEEEEECCCEEEEEECCCCEEEEEECCCEEEECCHHCCCCCCCEEEEEEECCCCCCC RVVADAIVPGLGQYFVGDRLRVWISGGQREAYVIPSRYVITRFGIDTVQLQQGAQQVSVP CEEEHHHHCCCHHHHHCCEEEEEEECCCEEEEECCCEEEEEEECCCHHHHHHCHHHCCCC VQRGRALPSADLPDGLEILSGLRAGDQLVQP HHHCCCCCCCCCCCHHHHHHHCCCCHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA