| Definition | Bradyrhizobium sp. ORS278 chromosome, complete genome. |
|---|---|
| Accession | NC_009445 |
| Length | 7,456,587 |
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The map label for this gene is 146341497
Identifier: 146341497
GI number: 146341497
Start: 4785376
End: 4788036
Strand: Direct
Name: 146341497
Synonym: BRADO4590
Alternate gene names: NA
Gene position: 4785376-4788036 (Clockwise)
Preceding gene: 146341495
Following gene: 146341500
Centisome position: 64.18
GC content: 67.08
Gene sequence:
>2661_bases ATGATCGCGGCGGTTTGGCCGACCGCCAACGTCTCCGATGCGTCGCTGGCGCAATGTGTCAGCGAGGTTCGTCTGGCGCT GGGCGACGAGCAGCAACGCTTGATCCGCACCGTCGTCGGACGTGGCTATCGCTTCGATGCCGCAGTCACCGCACTGGCGG ACGGCGGGCGCGTCGGATCCGCTGCGCCATCCCCACCGATCGAACCCCGTCTCTGTGCGCCCGCTCGGATGATCGCAGCC GACCAGGAACGGCCCGCAGACACCAGCAGAGCCATGTCCGGAAACGCGTCGATCGTCGGCCGCGACGATGAGCTCGAGTG GATGCTGCGACGCTGGCGCGAGGCGGCCGGTGGCGACGGACAAGTCGTGCTGCTGAGCGGCGAAGCGGGCATCGGGAAAT CGCGCCTCATCCTCGAATTCCTGGCGCAGGCGGCGGCAGCGCCGGAGCAATGTCTGCATTACGTCTGCGCCGCCGGACGA TCGGACAGCCCGCTTCATCCCGCCATTTGCGAAATCGAGACAGCCGCGCGCATCGCGAGCGAGGATGAGCTTCATGAGCG TATAGCGAAACTCGAGGCATTCCTGCAGGGCTTACCGATCGCGCCGGTGGATCGGTCGGCGCTCACCTCGTTGCTGCGGC ATGCGAACGACGGCACGGACGAACACGGATGGAGTCCACCTGAACGCCGCCAACGCGTGCTCGATGCGCTGCTGCGGCGG ATCGAAGGGCAGTCTCTGGCTGCGCCTGCGATCGTGGTGGTCGAGGACATCCATTGGATTGATCCGACCAGCCTTGAGCT TTTGGATCGCCTCGTCGACCGCACCAAGCACCTCCGCCTCCTGATGGTGCTGACGTTCAGACCGGACATCGCGCCACCCT GGATCGGTCAGCACCACGTCAGCCTGCTGACCCTCAACCGGCTCAGTCCTCATGATATCAGCGAAATGATCGCAAGCATC TGCGAACGATCCGCAATCGCAGCCGAAGTCGTCAAGACCGTCATCGAGCGTTCCGCCGGTGTGCCTTTGTTCGTCGAAGA GCTCACGCAGGCCGCGTTGGATGGCGGCATCACGCTCGCGCGCGACATCCCCTCATCGCTGCAGGCCTCCCTGACGGTCC GGCTGGATCGCCTCGGCCCCGCCCTGCGGATTGCCCAGCTTGCCGCGATTGCGGGCGAAAGTTTTACCGCGCGACTGATT GCGGCGGTGGCCGATCTCGCGGCAGCCGAGCTCGAAGTCCTGCTCGCACCGTTGCTGGCGAGCGGCCTGATCCTGCCGCA ACGGCCCAGGAACGAAGCCGCCTTCGCCTTCCGCCACGCGCTGCTGCGCGACGCCGTAGCCGCGACAATCCCGGCCGACG AGCGGCGCTCGCTGCATCTGCGGATCGCCACGGCGATGCTGCAGCAGATGCCGGTCCGGCCGTCCGCAGCACCTGAGGTC ATCGCATCGCACTTTGCGATCGGCGGAGAACCGCACCGAGCGCTCCCGTGGTGGCGCCGCGCCGGCGAGGACGCGATGCG CAACGCCTCCTTCGAGGAAGCGCTCGTTCATTTCGGAAAGGCGATCGCCATCGCCGACGGCGGTGGGCCAGATAGCTCGG CTGCATCCTTGGCGTTGACCGAACGGCTCGCCCTGCAGGTCGCCTATGGTCAGACGCTGCTCTGGGCGCGCAGCACCGAG CAGGCCATCATGGCGTTCGCCCGCGCGCGCGAGCTTGCCGCGCGCATCGACCAGGTGGCGGTACGCTTTGCCTCCTATTA CGGTCTCTGGGCCGGCAACATGATGAACGCACGGCTGGGCGAAGCCCGCGCCGTCGGGAGCGATTTTGTCCGCGAGGCCG ACGACGCCGGCACCGCAACGGAGATCGGCGTCGCGCACCGCACATTGGGGACGGCGTTCTGGTTCATGGGCGGCTTCGCG CAGGCGCACGACCATCTCCGCACCGCGGTCGACATGTACGATCCAGAACGTGATCGCGGCGCGCAAGCGCGTTTCAGCGT CGTGCCTGGACCGCCGGCCAAGGTCTGTCTTGCGCTTGCCAGCTTTGTCACGGGAGACGCTGCGCAAGCCACACGTCTCG CCCAGGAGGCGCTTGGGGACGCCGACCGCGCCGAACATGTCCCCACTCAGACCTACGTCCTCACTCATGCGTTGATGCTC GATCTGATCGGCGGCGCGTCGGGTCGCGACGGGCTGTCGCGATTGCTGTTGCGGCTCTGCGCGGACCATGCCTTGCCGCA TCTCGACTATGCCCGCGTCCTCGACCTCGCTACCCGCTTCCGACGCGGCGACGGGGCGGATCTGCAGCACCCGATGCGGC TCGCCATCGACAATCTCTGCCGCCACGGCCGTCGTCTGGGCATCCCCTGGTTCCTCGCCATCCTGGCCGAAATGGAAATG TCGGCCGGAGACCCGATGATTGCCCAGAGCACGATCGACAGGGCCGTCACCGAGGCGATGCGCTCCGAAGAGCGCTGGTA CCTGTCGCAGATCCATCATCTGCAGAGCCGACTGCTGCTCAGCCGGGGCCAGCGCCCGGAAGCCGAGCAGGCTCACGCCA ACGCGCTCGCCGTTGCAGCCAGTCAGCAGGCCGCCGCCTTTTCGCAACGCATCTCGCTCGCGGCCGACATCCCCGGCCTG CCCGACGGGCGACTCGTATGA
Upstream 100 bases:
>100_bases TGTTCGTGACCAGCATGGCGAGATCAGGTTGCGGCGGAAAAGCTTCGGCGTTCTCTGTCACCTCGTGCGTCATGCGGGAC GGCTCATCAGCAAGGACGAG
Downstream 100 bases:
>100_bases GCGCCGCGTCTCCTCTGGCGCCTCTCGCGCGCGGCACGGTGCCTTACTTTTATCAAGTCCGTCAGACGGATCGTGGCGAC TGCCTTCGAGGGACGAAACA
Product: putative ATPase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 886; Mature: 886
Protein sequence:
>886_residues MIAAVWPTANVSDASLAQCVSEVRLALGDEQQRLIRTVVGRGYRFDAAVTALADGGRVGSAAPSPPIEPRLCAPARMIAA DQERPADTSRAMSGNASIVGRDDELEWMLRRWREAAGGDGQVVLLSGEAGIGKSRLILEFLAQAAAAPEQCLHYVCAAGR SDSPLHPAICEIETAARIASEDELHERIAKLEAFLQGLPIAPVDRSALTSLLRHANDGTDEHGWSPPERRQRVLDALLRR IEGQSLAAPAIVVVEDIHWIDPTSLELLDRLVDRTKHLRLLMVLTFRPDIAPPWIGQHHVSLLTLNRLSPHDISEMIASI CERSAIAAEVVKTVIERSAGVPLFVEELTQAALDGGITLARDIPSSLQASLTVRLDRLGPALRIAQLAAIAGESFTARLI AAVADLAAAELEVLLAPLLASGLILPQRPRNEAAFAFRHALLRDAVAATIPADERRSLHLRIATAMLQQMPVRPSAAPEV IASHFAIGGEPHRALPWWRRAGEDAMRNASFEEALVHFGKAIAIADGGGPDSSAASLALTERLALQVAYGQTLLWARSTE QAIMAFARARELAARIDQVAVRFASYYGLWAGNMMNARLGEARAVGSDFVREADDAGTATEIGVAHRTLGTAFWFMGGFA QAHDHLRTAVDMYDPERDRGAQARFSVVPGPPAKVCLALASFVTGDAAQATRLAQEALGDADRAEHVPTQTYVLTHALML DLIGGASGRDGLSRLLLRLCADHALPHLDYARVLDLATRFRRGDGADLQHPMRLAIDNLCRHGRRLGIPWFLAILAEMEM SAGDPMIAQSTIDRAVTEAMRSEERWYLSQIHHLQSRLLLSRGQRPEAEQAHANALAVAASQQAAAFSQRISLAADIPGL PDGRLV
Sequences:
>Translated_886_residues MIAAVWPTANVSDASLAQCVSEVRLALGDEQQRLIRTVVGRGYRFDAAVTALADGGRVGSAAPSPPIEPRLCAPARMIAA DQERPADTSRAMSGNASIVGRDDELEWMLRRWREAAGGDGQVVLLSGEAGIGKSRLILEFLAQAAAAPEQCLHYVCAAGR SDSPLHPAICEIETAARIASEDELHERIAKLEAFLQGLPIAPVDRSALTSLLRHANDGTDEHGWSPPERRQRVLDALLRR IEGQSLAAPAIVVVEDIHWIDPTSLELLDRLVDRTKHLRLLMVLTFRPDIAPPWIGQHHVSLLTLNRLSPHDISEMIASI CERSAIAAEVVKTVIERSAGVPLFVEELTQAALDGGITLARDIPSSLQASLTVRLDRLGPALRIAQLAAIAGESFTARLI AAVADLAAAELEVLLAPLLASGLILPQRPRNEAAFAFRHALLRDAVAATIPADERRSLHLRIATAMLQQMPVRPSAAPEV IASHFAIGGEPHRALPWWRRAGEDAMRNASFEEALVHFGKAIAIADGGGPDSSAASLALTERLALQVAYGQTLLWARSTE QAIMAFARARELAARIDQVAVRFASYYGLWAGNMMNARLGEARAVGSDFVREADDAGTATEIGVAHRTLGTAFWFMGGFA QAHDHLRTAVDMYDPERDRGAQARFSVVPGPPAKVCLALASFVTGDAAQATRLAQEALGDADRAEHVPTQTYVLTHALML DLIGGASGRDGLSRLLLRLCADHALPHLDYARVLDLATRFRRGDGADLQHPMRLAIDNLCRHGRRLGIPWFLAILAEMEM SAGDPMIAQSTIDRAVTEAMRSEERWYLSQIHHLQSRLLLSRGQRPEAEQAHANALAVAASQQAAAFSQRISLAADIPGL PDGRLV >Mature_886_residues MIAAVWPTANVSDASLAQCVSEVRLALGDEQQRLIRTVVGRGYRFDAAVTALADGGRVGSAAPSPPIEPRLCAPARMIAA DQERPADTSRAMSGNASIVGRDDELEWMLRRWREAAGGDGQVVLLSGEAGIGKSRLILEFLAQAAAAPEQCLHYVCAAGR SDSPLHPAICEIETAARIASEDELHERIAKLEAFLQGLPIAPVDRSALTSLLRHANDGTDEHGWSPPERRQRVLDALLRR IEGQSLAAPAIVVVEDIHWIDPTSLELLDRLVDRTKHLRLLMVLTFRPDIAPPWIGQHHVSLLTLNRLSPHDISEMIASI CERSAIAAEVVKTVIERSAGVPLFVEELTQAALDGGITLARDIPSSLQASLTVRLDRLGPALRIAQLAAIAGESFTARLI AAVADLAAAELEVLLAPLLASGLILPQRPRNEAAFAFRHALLRDAVAATIPADERRSLHLRIATAMLQQMPVRPSAAPEV IASHFAIGGEPHRALPWWRRAGEDAMRNASFEEALVHFGKAIAIADGGGPDSSAASLALTERLALQVAYGQTLLWARSTE QAIMAFARARELAARIDQVAVRFASYYGLWAGNMMNARLGEARAVGSDFVREADDAGTATEIGVAHRTLGTAFWFMGGFA QAHDHLRTAVDMYDPERDRGAQARFSVVPGPPAKVCLALASFVTGDAAQATRLAQEALGDADRAEHVPTQTYVLTHALML DLIGGASGRDGLSRLLLRLCADHALPHLDYARVLDLATRFRRGDGADLQHPMRLAIDNLCRHGRRLGIPWFLAILAEMEM SAGDPMIAQSTIDRAVTEAMRSEERWYLSQIHHLQSRLLLSRGQRPEAEQAHANALAVAASQQAAAFSQRISLAADIPGL PDGRLV
Specific function: Unknown
COG id: COG3899
COG function: function code R; Predicted ATPase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 1 guanylate cyclase domain [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001054 - InterPro: IPR011579 [H]
Pfam domain/function: PF01637 Arch_ATPase; PF00211 Guanylate_cyc [H]
EC number: NA
Molecular weight: Translated: 95648; Mature: 95648
Theoretical pI: Translated: 6.36; Mature: 6.36
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIAAVWPTANVSDASLAQCVSEVRLALGDEQQRLIRTVVGRGYRFDAAVTALADGGRVGS CEEEECCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCEEHHHHHHHHCCCCCCC AAPSPPIEPRLCAPARMIAADQERPADTSRAMSGNASIVGRDDELEWMLRRWREAAGGDG CCCCCCCCCCCCCCHHHHHCCCCCCCCHHHHCCCCCEEEECCHHHHHHHHHHHHHCCCCC QVVLLSGEAGIGKSRLILEFLAQAAAAPEQCLHYVCAAGRSDSPLHPAICEIETAARIAS EEEEEECCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHCC EDELHERIAKLEAFLQGLPIAPVDRSALTSLLRHANDGTDEHGWSPPERRQRVLDALLRR HHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHH IEGQSLAAPAIVVVEDIHWIDPTSLELLDRLVDRTKHLRLLMVLTFRPDIAPPWIGQHHV HCCCCCCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHHEEEEEEEECCCCCCCCCCCCCE SLLTLNRLSPHDISEMIASICERSAIAAEVVKTVIERSAGVPLFVEELTQAALDGGITLA EEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCEEH RDIPSSLQASLTVRLDRLGPALRIAQLAAIAGESFTARLIAAVADLAAAELEVLLAPLLA HHCCHHHHHHHHEEHHHCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHH SGLILPQRPRNEAAFAFRHALLRDAVAATIPADERRSLHLRIATAMLQQMPVRPSAAPEV CCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCCCCCHHH IASHFAIGGEPHRALPWWRRAGEDAMRNASFEEALVHFGKAIAIADGGGPDSSAASLALT HHHHHHCCCCCCCCCHHHHHCCHHHHHCCCHHHHHHHCCCEEEEECCCCCCCHHHHHHHH ERLALQVAYGQTLLWARSTEQAIMAFARARELAARIDQVAVRFASYYGLWAGNMMNARLG HHHHHHHHCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHH EARAVGSDFVREADDAGTATEIGVAHRTLGTAFWFMGGFAQAHDHLRTAVDMYDPERDRG HHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC AQARFSVVPGPPAKVCLALASFVTGDAAQATRLAQEALGDADRAEHVPTQTYVLTHALML CCCEEEECCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCHHHHCCCCHHHHHHHHHHH DLIGGASGRDGLSRLLLRLCADHALPHLDYARVLDLATRFRRGDGADLQHPMRLAIDNLC HHHCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHH RHGRRLGIPWFLAILAEMEMSAGDPMIAQSTIDRAVTEAMRSEERWYLSQIHHLQSRLLL HCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH SRGQRPEAEQAHANALAVAASQQAAAFSQRISLAADIPGLPDGRLV HCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC >Mature Secondary Structure MIAAVWPTANVSDASLAQCVSEVRLALGDEQQRLIRTVVGRGYRFDAAVTALADGGRVGS CEEEECCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCEEHHHHHHHHCCCCCCC AAPSPPIEPRLCAPARMIAADQERPADTSRAMSGNASIVGRDDELEWMLRRWREAAGGDG CCCCCCCCCCCCCCHHHHHCCCCCCCCHHHHCCCCCEEEECCHHHHHHHHHHHHHCCCCC QVVLLSGEAGIGKSRLILEFLAQAAAAPEQCLHYVCAAGRSDSPLHPAICEIETAARIAS EEEEEECCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHCC EDELHERIAKLEAFLQGLPIAPVDRSALTSLLRHANDGTDEHGWSPPERRQRVLDALLRR HHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHH IEGQSLAAPAIVVVEDIHWIDPTSLELLDRLVDRTKHLRLLMVLTFRPDIAPPWIGQHHV HCCCCCCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHHEEEEEEEECCCCCCCCCCCCCE SLLTLNRLSPHDISEMIASICERSAIAAEVVKTVIERSAGVPLFVEELTQAALDGGITLA EEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCEEH RDIPSSLQASLTVRLDRLGPALRIAQLAAIAGESFTARLIAAVADLAAAELEVLLAPLLA HHCCHHHHHHHHEEHHHCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHH SGLILPQRPRNEAAFAFRHALLRDAVAATIPADERRSLHLRIATAMLQQMPVRPSAAPEV CCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCCCCCHHH IASHFAIGGEPHRALPWWRRAGEDAMRNASFEEALVHFGKAIAIADGGGPDSSAASLALT HHHHHHCCCCCCCCCHHHHHCCHHHHHCCCHHHHHHHCCCEEEEECCCCCCCHHHHHHHH ERLALQVAYGQTLLWARSTEQAIMAFARARELAARIDQVAVRFASYYGLWAGNMMNARLG HHHHHHHHCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHH EARAVGSDFVREADDAGTATEIGVAHRTLGTAFWFMGGFAQAHDHLRTAVDMYDPERDRG HHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC AQARFSVVPGPPAKVCLALASFVTGDAAQATRLAQEALGDADRAEHVPTQTYVLTHALML CCCEEEECCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCHHHHCCCCHHHHHHHHHHH DLIGGASGRDGLSRLLLRLCADHALPHLDYARVLDLATRFRRGDGADLQHPMRLAIDNLC HHHCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHH RHGRRLGIPWFLAILAEMEMSAGDPMIAQSTIDRAVTEAMRSEERWYLSQIHHLQSRLLL HCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH SRGQRPEAEQAHANALAVAASQQAAAFSQRISLAADIPGLPDGRLV HCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 11481430 [H]