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The map label for this gene is tdcF [C]

Identifier: 146341476

GI number: 146341476

Start: 4766020

End: 4766370

Strand: Reverse

Name: tdcF [C]

Synonym: BRADO4569

Alternate gene names: 146341476

Gene position: 4766370-4766020 (Counterclockwise)

Preceding gene: 146341477

Following gene: 146341475

Centisome position: 63.92

GC content: 65.24

Gene sequence:

>351_bases
ATGTCCGACGCAAACTCATGGCCGTTCTCGCTGGTGCGCCGCGCCGGCGGTCTCGTGTTCCTGTCGGGCGAAGTGCCGGT
CGCCGATGACGGCAGCATTCCCGAGGGCATCACGGCGCAGACCGATCTGGTGTTCAAGCTGATCTCGGAGACGCTGGCCG
GCGAAGGGCTTTCGCTCGACGACGTCGTGTCTTGCATGGTGCATCTCGCCGACAAGGCCGATTTCGCCGACTACAACGCG
GCCTATCGCAAGCATTTCAAGGATCCGCTGCCGGTGCGCACCACGGTGCAGGCGCAGATGATCGCGGATGTGAAGCTCGA
GGTCACCGTCGTCGCGGCGGCGCGGGCCTGA

Upstream 100 bases:

>100_bases
CTGACCAGGCTCGCCGCGTTGCCGCCGCTGTCGCAGACGCCCGGCTTCATGGCCTGGGATTGAAGCGTGGCATCATCAAT
ACAGTCTTCTGGAGCTAGCA

Downstream 100 bases:

>100_bases
TCAGGAGTGATGACGATGCGGAGCGCAATCGTTCTTGGCGGGGGCATGGTCGGCGTCGGCACGGCGCTGCACCTGCAGAT
CAGGGGCTGGTCGGTGGCGC

Product: putative translation initiation inhibitor-like protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 116; Mature: 115

Protein sequence:

>116_residues
MSDANSWPFSLVRRAGGLVFLSGEVPVADDGSIPEGITAQTDLVFKLISETLAGEGLSLDDVVSCMVHLADKADFADYNA
AYRKHFKDPLPVRTTVQAQMIADVKLEVTVVAAARA

Sequences:

>Translated_116_residues
MSDANSWPFSLVRRAGGLVFLSGEVPVADDGSIPEGITAQTDLVFKLISETLAGEGLSLDDVVSCMVHLADKADFADYNA
AYRKHFKDPLPVRTTVQAQMIADVKLEVTVVAAARA
>Mature_115_residues
SDANSWPFSLVRRAGGLVFLSGEVPVADDGSIPEGITAQTDLVFKLISETLAGEGLSLDDVVSCMVHLADKADFADYNAA
YRKHFKDPLPVRTTVQAQMIADVKLEVTVVAAARA

Specific function: Anaerobic degradation of L-threonine to propionate. [C]

COG id: COG0251

COG function: function code J; Putative translation initiation inhibitor, yjgF family

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the RutC family [H]

Homologues:

Organism=Escherichia coli, GI87082213, Length=106, Percent_Identity=33.9622641509434, Blast_Score=61, Evalue=2e-11,
Organism=Saccharomyces cerevisiae, GI6322138, Length=109, Percent_Identity=33.9449541284404, Blast_Score=69, Evalue=2e-13,
Organism=Saccharomyces cerevisiae, GI6320899, Length=104, Percent_Identity=35.5769230769231, Blast_Score=63, Evalue=9e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013813
- InterPro:   IPR006175
- InterPro:   IPR006056
- InterPro:   IPR019897 [H]

Pfam domain/function: PF01042 Ribonuc_L-PSP [H]

EC number: NA

Molecular weight: Translated: 12394; Mature: 12263

Theoretical pI: Translated: 4.46; Mature: 4.46

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSDANSWPFSLVRRAGGLVFLSGEVPVADDGSIPEGITAQTDLVFKLISETLAGEGLSLD
CCCCCCCCHHHHHHCCCEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCHH
DVVSCMVHLADKADFADYNAAYRKHFKDPLPVRTTVQAQMIADVKLEVTVVAAARA
HHHHHHHHHHCCCCCCCHHHHHHHHCCCCCCCCHHHHHHHHCCCEEEEEEEEECCC
>Mature Secondary Structure 
SDANSWPFSLVRRAGGLVFLSGEVPVADDGSIPEGITAQTDLVFKLISETLAGEGLSLD
CCCCCCCHHHHHHCCCEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCHH
DVVSCMVHLADKADFADYNAAYRKHFKDPLPVRTTVQAQMIADVKLEVTVVAAARA
HHHHHHHHHHCCCCCCCHHHHHHHHCCCCCCCCHHHHHHHHCCCEEEEEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11427726 [H]