| Definition | Bradyrhizobium sp. ORS278 chromosome, complete genome. |
|---|---|
| Accession | NC_009445 |
| Length | 7,456,587 |
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The map label for this gene is 146341402
Identifier: 146341402
GI number: 146341402
Start: 4690174
End: 4691250
Strand: Reverse
Name: 146341402
Synonym: BRADO4492
Alternate gene names: NA
Gene position: 4691250-4690174 (Counterclockwise)
Preceding gene: 146341403
Following gene: 146341401
Centisome position: 62.91
GC content: 69.45
Gene sequence:
>1077_bases ATGTGGCCCGACCGCCGCTTCCTTGATCTCGTTAACACCGAGCACCCGATCGTGCTCGCGCCAATGGCCGGCGTGATGGA TGCCGATCTCGTCATCGCGGTCGCCCAAGCCGGCGGCCTCGGCTCGCTGCCCTGTGCGATGCTGTCCGCCGACAAGGTGC GCGAGCAAGTCAGGATCATCCGCCAGCGCGTGTCGGCGCCGGTCAACACGAATTTCTTCTGCCACACGCCCGTGGAGGCC GACGCGGCTCGTGAGGCCGGGTGGAAGAGGCGGCTCGGCGCCTATTATGAAGAGTATGGCGTCGATCCCGAGGTGCCGGT CACCGCGGCCAACCGCGCGCCGTTCGATGCGGCGATGTGCGCCATCGTCGAGGAGCTGAAGCCGGAGATCGTCAGCTTCC ATTTCGGCCTGCCGGAGCAAGGTCTGCTGGCACGTGTGAAGGCGACCGGTGCGGTGATCATGGCCTCTGCAACGGTCGTG CGCGAGGCGGTCTGGCTGGAGCGGAACGGTGCCGATGTCATCATCGCGCAAGGCGCCGAGGCCGGCGGTCATCGCGGCAT GTTCCTCACCGACAAGCTCGCCGAGCAGGTCGGGACGTTGGCGCTGGTGCCGCAGATCGTCGATGCGGTGAAGCTGCCGG TGATCGCGGCCGGCGGGATCGCCGATGCCCGCGGCATCGCGGCGGCATTCGCGCTCGGCGCCTCCGGCGTGCAGATCGGC AGCGCGTTTCTGCGCTGCCCCGAGTCCAAGGTTAGCGTCCCGGCGCGCGCCGCGCTCGCGGCAGCCAGCGACGAATCGAC GGTCATCACCAACGTCATGACCGGCCGGCTGGCCCGCGGCGTCGCCAACCGGGTGATGCGCGAGGTCGGGCCGGTCTCGC CGGACGCGCCGGCGTTTCCGCATGCGGCAACCGCGCTCGGTCCGCTCAAGGCGGCCGCGGAGAAGCAGGGCAAGGTCGAT TTCACCAACCTTTGGGCCGGGCAGGCGTTGCCGCTCGGGCGCGAGATACCGGCAACCGAGCTCACGCGGACATTGGCCGA ACAGGCACTGGCGCGCCTCGGCAAGCTGGCGGGCTGA
Upstream 100 bases:
>100_bases CGAGATCGTCGCGCGGATCGTCTCAGAGGCCGAGCAGATCCTGCAAGGCCGGCGAAACTCATCCGTGCCGCTCCGGAACT GAAAGAGAATGAGGTGAACC
Downstream 100 bases:
>100_bases CGTCAGGGAGACGTCGAGGGCAGGGGAGCTGCCCAGGGAAAGCCTGGGGCTGCCGGTTGCGGCGCGAAAGCGGGCTCTGC TATAGGGCGGGTACACTGTG
Product: putative 2-nitropropane dioxygenase
Products: NA
Alternate protein names: Nitroalkane oxidase [H]
Number of amino acids: Translated: 358; Mature: 358
Protein sequence:
>358_residues MWPDRRFLDLVNTEHPIVLAPMAGVMDADLVIAVAQAGGLGSLPCAMLSADKVREQVRIIRQRVSAPVNTNFFCHTPVEA DAAREAGWKRRLGAYYEEYGVDPEVPVTAANRAPFDAAMCAIVEELKPEIVSFHFGLPEQGLLARVKATGAVIMASATVV REAVWLERNGADVIIAQGAEAGGHRGMFLTDKLAEQVGTLALVPQIVDAVKLPVIAAGGIADARGIAAAFALGASGVQIG SAFLRCPESKVSVPARAALAAASDESTVITNVMTGRLARGVANRVMREVGPVSPDAPAFPHAATALGPLKAAAEKQGKVD FTNLWAGQALPLGREIPATELTRTLAEQALARLGKLAG
Sequences:
>Translated_358_residues MWPDRRFLDLVNTEHPIVLAPMAGVMDADLVIAVAQAGGLGSLPCAMLSADKVREQVRIIRQRVSAPVNTNFFCHTPVEA DAAREAGWKRRLGAYYEEYGVDPEVPVTAANRAPFDAAMCAIVEELKPEIVSFHFGLPEQGLLARVKATGAVIMASATVV REAVWLERNGADVIIAQGAEAGGHRGMFLTDKLAEQVGTLALVPQIVDAVKLPVIAAGGIADARGIAAAFALGASGVQIG SAFLRCPESKVSVPARAALAAASDESTVITNVMTGRLARGVANRVMREVGPVSPDAPAFPHAATALGPLKAAAEKQGKVD FTNLWAGQALPLGREIPATELTRTLAEQALARLGKLAG >Mature_358_residues MWPDRRFLDLVNTEHPIVLAPMAGVMDADLVIAVAQAGGLGSLPCAMLSADKVREQVRIIRQRVSAPVNTNFFCHTPVEA DAAREAGWKRRLGAYYEEYGVDPEVPVTAANRAPFDAAMCAIVEELKPEIVSFHFGLPEQGLLARVKATGAVIMASATVV REAVWLERNGADVIIAQGAEAGGHRGMFLTDKLAEQVGTLALVPQIVDAVKLPVIAAGGIADARGIAAAFALGASGVQIG SAFLRCPESKVSVPARAALAAASDESTVITNVMTGRLARGVANRVMREVGPVSPDAPAFPHAATALGPLKAAAEKQGKVD FTNLWAGQALPLGREIPATELTRTLAEQALARLGKLAG
Specific function: Catalyzes the oxidation of alkyl nitronates to produce the corresponding carbonyl compounds and nitrites [H]
COG id: COG2070
COG function: function code R; Dioxygenases related to 2-nitropropane dioxygenase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the nitronate monooxygenase family [H]
Homologues:
Organism=Saccharomyces cerevisiae, GI6322609, Length=326, Percent_Identity=30.6748466257669, Blast_Score=140, Evalue=4e-34,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004136 - InterPro: IPR013785 [H]
Pfam domain/function: PF03060 NPD [H]
EC number: =1.13.12.16 [H]
Molecular weight: Translated: 37458; Mature: 37458
Theoretical pI: Translated: 6.68; Mature: 6.68
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MWPDRRFLDLVNTEHPIVLAPMAGVMDADLVIAVAQAGGLGSLPCAMLSADKVREQVRII CCCCHHHHHHHCCCCCEEEECCCCCCCCHHEEEEECCCCCCCCCHHHHHHHHHHHHHHHH RQRVSAPVNTNFFCHTPVEADAAREAGWKRRLGAYYEEYGVDPEVPVTAANRAPFDAAMC HHHHCCCCCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCEEECCCCCHHHHHH AIVEELKPEIVSFHFGLPEQGLLARVKATGAVIMASATVVREAVWLERNGADVIIAQGAE HHHHHHCHHHEEEECCCCCHHHHHHHHHCCEEEEHHHHHHHHHHHHCCCCCEEEEECCCC AGGHRGMFLTDKLAEQVGTLALVPQIVDAVKLPVIAAGGIADARGIAAAFALGASGVQIG CCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHCCEEEECCCCHHHHHHHHHHHCCCCHHHH SAFLRCPESKVSVPARAALAAASDESTVITNVMTGRLARGVANRVMREVGPVSPDAPAFP HHHHHCCCHHCCCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC HAATALGPLKAAAEKQGKVDFTNLWAGQALPLGREIPATELTRTLAEQALARLGKLAG CHHHHHHHHHHHHHHCCCCCHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MWPDRRFLDLVNTEHPIVLAPMAGVMDADLVIAVAQAGGLGSLPCAMLSADKVREQVRII CCCCHHHHHHHCCCCCEEEECCCCCCCCHHEEEEECCCCCCCCCHHHHHHHHHHHHHHHH RQRVSAPVNTNFFCHTPVEADAAREAGWKRRLGAYYEEYGVDPEVPVTAANRAPFDAAMC HHHHCCCCCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCEEECCCCCHHHHHH AIVEELKPEIVSFHFGLPEQGLLARVKATGAVIMASATVVREAVWLERNGADVIIAQGAE HHHHHHCHHHEEEECCCCCHHHHHHHHHCCEEEEHHHHHHHHHHHHCCCCCEEEEECCCC AGGHRGMFLTDKLAEQVGTLALVPQIVDAVKLPVIAAGGIADARGIAAAFALGASGVQIG CCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHCCEEEECCCCHHHHHHHHHHHCCCCHHHH SAFLRCPESKVSVPARAALAAASDESTVITNVMTGRLARGVANRVMREVGPVSPDAPAFP HHHHHCCCHHCCCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC HAATALGPLKAAAEKQGKVDFTNLWAGQALPLGREIPATELTRTLAEQALARLGKLAG CHHHHHHHHHHHHHHCCCCCHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA