| Definition | Bradyrhizobium sp. ORS278 chromosome, complete genome. |
|---|---|
| Accession | NC_009445 |
| Length | 7,456,587 |
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The map label for this gene is 146340694
Identifier: 146340694
GI number: 146340694
Start: 3908134
End: 3908676
Strand: Direct
Name: 146340694
Synonym: BRADO3745
Alternate gene names: NA
Gene position: 3908134-3908676 (Clockwise)
Preceding gene: 146340693
Following gene: 146340695
Centisome position: 52.41
GC content: 74.03
Gene sequence:
>543_bases ATGACCATCATGCGCCGCCCGCAACGCCTCATCGCCCTGTCCGTCGTCGTCGCGCTCGCAGGCGCGCTCGGCGGCTGCGC CAGCGGCGGCAGCTTCGACCCGTCCGACCTGCTCGACTTCCTGGACACCAAGAAGAAGCTGCCCGGCGACCGCAAGCCCG TGTTCCCCGAGGGCGTCCCCGGCCTGGAGCAAGGTGTGCCGAAGGAGCTCTACAAGGGCGCCCAGCAGCAGCCGACGGAG GATCCGGCGGCACAGGCCGCCGCGCCGACCCCGCCCGTGGAGCCGCCCACCAAAGGCAAGAAGGGCGCCAAGGGCCGCCA GCAGGCGGCCGTGAGCAATCCGGCGCCGGCCGCCGACCCGCAGCCGCAGGACGGCGAGGCGGCCGCAGTCGAGGAGGGCG CGGCCGCCGTGCCGGCAGCCCCGAAGCCGAAGAAGATCGTCCGCCGCCGCACCACCGCTCCGCCGGCGGATGACGCCGCG CCCGCGCAGCAATCCAGCGGCCAATTTCCGGCCCCGATGCCGAGCGGCTCCTTCAGCCGTTAA
Upstream 100 bases:
>100_bases GTTGCAGGCGCTGTTGCCTGCGGTCGCCAAGAGCTGATCCAGAAGCCGAAGGTGAGCCGATCGCGGCCTTCGCGATGGCG AAACTGAGTTTGATCGGAAG
Downstream 100 bases:
>100_bases TCTCATCGGCGAATCGGCCGATCGCCCGTTCGGTTTTACGGTCGGATGCGCTAAAGCTGCGCGCCAACGCGCGCTCGGAT CATCATGTCTTTTACCATCG
Product: putative signal peptide
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 180; Mature: 179
Protein sequence:
>180_residues MTIMRRPQRLIALSVVVALAGALGGCASGGSFDPSDLLDFLDTKKKLPGDRKPVFPEGVPGLEQGVPKELYKGAQQQPTE DPAAQAAAPTPPVEPPTKGKKGAKGRQQAAVSNPAPAADPQPQDGEAAAVEEGAAAVPAAPKPKKIVRRRTTAPPADDAA PAQQSSGQFPAPMPSGSFSR
Sequences:
>Translated_180_residues MTIMRRPQRLIALSVVVALAGALGGCASGGSFDPSDLLDFLDTKKKLPGDRKPVFPEGVPGLEQGVPKELYKGAQQQPTE DPAAQAAAPTPPVEPPTKGKKGAKGRQQAAVSNPAPAADPQPQDGEAAAVEEGAAAVPAAPKPKKIVRRRTTAPPADDAA PAQQSSGQFPAPMPSGSFSR >Mature_179_residues TIMRRPQRLIALSVVVALAGALGGCASGGSFDPSDLLDFLDTKKKLPGDRKPVFPEGVPGLEQGVPKELYKGAQQQPTED PAAQAAAPTPPVEPPTKGKKGAKGRQQAAVSNPAPAADPQPQDGEAAAVEEGAAAVPAAPKPKKIVRRRTTAPPADDAAP AQQSSGQFPAPMPSGSFSR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18385; Mature: 18254
Theoretical pI: Translated: 9.96; Mature: 9.96
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 1.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTIMRRPQRLIALSVVVALAGALGGCASGGSFDPSDLLDFLDTKKKLPGDRKPVFPEGVP CCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCC GLEQGVPKELYKGAQQQPTEDPAAQAAAPTPPVEPPTKGKKGAKGRQQAAVSNPAPAADP CHHHCCCHHHHCCHHCCCCCCCHHHCCCCCCCCCCCCCCCCCCCCHHHHHCCCCCCCCCC QPQDGEAAAVEEGAAAVPAAPKPKKIVRRRTTAPPADDAAPAQQSSGQFPAPMPSGSFSR CCCCCCHHHHHCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure TIMRRPQRLIALSVVVALAGALGGCASGGSFDPSDLLDFLDTKKKLPGDRKPVFPEGVP CCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCC GLEQGVPKELYKGAQQQPTEDPAAQAAAPTPPVEPPTKGKKGAKGRQQAAVSNPAPAADP CHHHCCCHHHHCCHHCCCCCCCHHHCCCCCCCCCCCCCCCCCCCCHHHHHCCCCCCCCCC QPQDGEAAAVEEGAAAVPAAPKPKKIVRRRTTAPPADDAAPAQQSSGQFPAPMPSGSFSR CCCCCCHHHHHCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA