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The map label for this gene is 146340538

Identifier: 146340538

GI number: 146340538

Start: 3775101

End: 3775631

Strand: Reverse

Name: 146340538

Synonym: BRADO3581

Alternate gene names: NA

Gene position: 3775631-3775101 (Counterclockwise)

Preceding gene: 146340541

Following gene: 146340537

Centisome position: 50.63

GC content: 73.26

Gene sequence:

>531_bases
ATGACGCGCAAGACGACAACCCGATCCGTTCAGCGGCGAGCGCCGCGCCGTCGCGTGGCGGCGGCTCCGCCGTCGGCCCG
CCCGCCGCTCCCGGGCGAAGGCAAGCGCGGCGAGGACGGACATCTCGCCTATCTGCTGCGCCAGGCGCAGGCGGCGGCCC
GGCTGTCGCTCGAGCGCGCCCTGACCGCGACCGGTCTGACCCATCCGCAATTCGTGGTGCTGACGATGTTGAAGGCCTAT
CCGGGCCTGTCCGGCGCCGACTGCGCCCGCCTCGCCGTGCTGACGCCGCAGACCGTCAACGTCATCATCGCAAATCTGGA
GCGTGACGGCGCCATCCGCCGGACGCCGCATCCGGTGCACGGCCGCATGCTGCAATGGAGCCTGACCCCGCGCGGCCGCG
CGCTGCTGACGCGGGCGCGGCGCCAGGCGACTGCGCTGGAGCGCCGCCTCGCCGCCGGTCTCGGCCAGCGGGATCTCGCA
ACGATTCGACGCTGGCTGGCGCGCATCGCCGCCGAGTTCCATCCGGATTGA

Upstream 100 bases:

>100_bases
GCTCCGGGGCCTGGCTCCGGAACGTCGTGTAGTCGCTGCGCGCAAGTGACATTGTTTATCTCATGTTATCAGCCTTCTGA
TAATTTATCAGAGCTATGAT

Downstream 100 bases:

>100_bases
GCGCTGCGGGGGGTCTGCCGTCCGCAGGCCGCAGCGGCTAGACTGCCGGACATGACCCAGCCCGATTCCCCGACCCGCCG
CACCCTGCTCCGCTCCGGCC

Product: MarR family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 176; Mature: 175

Protein sequence:

>176_residues
MTRKTTTRSVQRRAPRRRVAAAPPSARPPLPGEGKRGEDGHLAYLLRQAQAAARLSLERALTATGLTHPQFVVLTMLKAY
PGLSGADCARLAVLTPQTVNVIIANLERDGAIRRTPHPVHGRMLQWSLTPRGRALLTRARRQATALERRLAAGLGQRDLA
TIRRWLARIAAEFHPD

Sequences:

>Translated_176_residues
MTRKTTTRSVQRRAPRRRVAAAPPSARPPLPGEGKRGEDGHLAYLLRQAQAAARLSLERALTATGLTHPQFVVLTMLKAY
PGLSGADCARLAVLTPQTVNVIIANLERDGAIRRTPHPVHGRMLQWSLTPRGRALLTRARRQATALERRLAAGLGQRDLA
TIRRWLARIAAEFHPD
>Mature_175_residues
TRKTTTRSVQRRAPRRRVAAAPPSARPPLPGEGKRGEDGHLAYLLRQAQAAARLSLERALTATGLTHPQFVVLTMLKAYP
GLSGADCARLAVLTPQTVNVIIANLERDGAIRRTPHPVHGRMLQWSLTPRGRALLTRARRQATALERRLAAGLGQRDLAT
IRRWLARIAAEFHPD

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH marR-type DNA-binding domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000835
- InterPro:   IPR023187
- InterPro:   IPR011991 [H]

Pfam domain/function: PF01047 MarR [H]

EC number: NA

Molecular weight: Translated: 19406; Mature: 19275

Theoretical pI: Translated: 12.44; Mature: 12.44

Prosite motif: PS50995 HTH_MARR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTRKTTTRSVQRRAPRRRVAAAPPSARPPLPGEGKRGEDGHLAYLLRQAQAAARLSLERA
CCCCHHHHHHHHHCCHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH
LTATGLTHPQFVVLTMLKAYPGLSGADCARLAVLTPQTVNVIIANLERDGAIRRTPHPVH
HHHCCCCCHHHHHHHHHHHCCCCCCCCHHEEEEECCCEEEEEEEECCCCCCCCCCCCCCC
GRMLQWSLTPRGRALLTRARRQATALERRLAAGLGQRDLATIRRWLARIAAEFHPD
CCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure 
TRKTTTRSVQRRAPRRRVAAAPPSARPPLPGEGKRGEDGHLAYLLRQAQAAARLSLERA
CCCHHHHHHHHHCCHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH
LTATGLTHPQFVVLTMLKAYPGLSGADCARLAVLTPQTVNVIIANLERDGAIRRTPHPVH
HHHCCCCCHHHHHHHHHHHCCCCCCCCHHEEEEECCCEEEEEEEECCCCCCCCCCCCCCC
GRMLQWSLTPRGRALLTRARRQATALERRLAAGLGQRDLATIRRWLARIAAEFHPD
CCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9634230; 12218036 [H]