| Definition | Bradyrhizobium sp. ORS278 chromosome, complete genome. |
|---|---|
| Accession | NC_009445 |
| Length | 7,456,587 |
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The map label for this gene is bcp [H]
Identifier: 146340487
GI number: 146340487
Start: 3718338
End: 3719066
Strand: Reverse
Name: bcp [H]
Synonym: BRADO3529
Alternate gene names: 146340487
Gene position: 3719066-3718338 (Counterclockwise)
Preceding gene: 146340489
Following gene: 146340486
Centisome position: 49.88
GC content: 65.29
Gene sequence:
>729_bases ATGTCAAAGGAATCACGGAAGAAATCCTCAAATCCGGCGTCGTACGGGCATGCCTCCCGAAGCGGCCTCGCCACCGCCGC CAAGAGCGTTGCGAAGAAGACCAGCAAGCCCGCAACGGCCAAGGCGGTCAAGAAGACCGCTGTGAAGCCCGCAAAGGCCG TGACCAGCAAGGCGTCGACCAGCAAGGGTACGACCAGCAAGGGGACGACCAGCAAGGCTGCGGCGACCAAGGCCAAGGTC TCGAAGCCGGCGGCGCCAGCTGGAACCGCGCTTGCCGAAGGCGCCAAGGCTCCCGCCTTCAAGCTGCCGCGCGACGGCGG CGGAACCGTTTCGCTCGCTGACTATGCCGGCAAGAAGCTCGTGCTGTTCTTCTATCCCAAGGCCAACACGCCCGGCTGCA CCAAGGAGGCGATCGACTTTACCCGCCTCACCAAGGACTTTGCCGCCGCCGGGACGGCCGTGCTCGGCGTGTCGGCAGAT TCGGTCAAGGCGCAGGACAGTTTCCGCGACAAGCACGATCTGGCGGTGCCGCTGATCTCCGACGAGACGCATGAGATGCT GGAGGCCTATGGCGCCTGGGGTGAGAAATCGCTCTACGGCCGCAAGTTTCTCGGCATCATCAGGAGCACCGTGCTGATCG GCACGGACGGCCGCGTCGCCAAGGTCTGGCGCAACGTCAAGGTCGACGGCCATGCCGACGCGGTGCTGGCTGCCGCGCGC GACCTGTAG
Upstream 100 bases:
>100_bases GCGACGCACCGAAGCACGGATGCAGATCGATCCCGGGACACCGGACAAGAACCGGGATACTTTCATTGTTGAACTGCGGA AAGCGACGAAAGGAAGGCGT
Downstream 100 bases:
>100_bases AATGCGCAGCAGGGCGTTGGGGGAAAATTAACCATGCAGGGGTCAAATCGCTCCCGTAAATGACGCCGCTGGACGTAACG AGCTCCAGCCGGCGCGGGAG
Product: hypothetical protein
Products: NA
Alternate protein names: Bacterioferritin comigratory protein; Thioredoxin reductase [H]
Number of amino acids: Translated: 242; Mature: 241
Protein sequence:
>242_residues MSKESRKKSSNPASYGHASRSGLATAAKSVAKKTSKPATAKAVKKTAVKPAKAVTSKASTSKGTTSKGTTSKAAATKAKV SKPAAPAGTALAEGAKAPAFKLPRDGGGTVSLADYAGKKLVLFFYPKANTPGCTKEAIDFTRLTKDFAAAGTAVLGVSAD SVKAQDSFRDKHDLAVPLISDETHEMLEAYGAWGEKSLYGRKFLGIIRSTVLIGTDGRVAKVWRNVKVDGHADAVLAAAR DL
Sequences:
>Translated_242_residues MSKESRKKSSNPASYGHASRSGLATAAKSVAKKTSKPATAKAVKKTAVKPAKAVTSKASTSKGTTSKGTTSKAAATKAKV SKPAAPAGTALAEGAKAPAFKLPRDGGGTVSLADYAGKKLVLFFYPKANTPGCTKEAIDFTRLTKDFAAAGTAVLGVSAD SVKAQDSFRDKHDLAVPLISDETHEMLEAYGAWGEKSLYGRKFLGIIRSTVLIGTDGRVAKVWRNVKVDGHADAVLAAAR DL >Mature_241_residues SKESRKKSSNPASYGHASRSGLATAAKSVAKKTSKPATAKAVKKTAVKPAKAVTSKASTSKGTTSKGTTSKAAATKAKVS KPAAPAGTALAEGAKAPAFKLPRDGGGTVSLADYAGKKLVLFFYPKANTPGCTKEAIDFTRLTKDFAAAGTAVLGVSADS VKAQDSFRDKHDLAVPLISDETHEMLEAYGAWGEKSLYGRKFLGIIRSTVLIGTDGRVAKVWRNVKVDGHADAVLAAARD L
Specific function: Unknown
COG id: COG1225
COG function: function code O; Peroxiredoxin
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 thioredoxin domain [H]
Homologues:
Organism=Escherichia coli, GI1788825, Length=146, Percent_Identity=40.4109589041096, Blast_Score=123, Evalue=1e-29,
Paralogues:
None
Copy number: 920 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000866 - InterPro: IPR017936 - InterPro: IPR012336 - InterPro: IPR012335 [H]
Pfam domain/function: PF00578 AhpC-TSA [H]
EC number: =1.11.1.15 [H]
Molecular weight: Translated: 25025; Mature: 24894
Theoretical pI: Translated: 10.78; Mature: 10.78
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 0.8 %Met (Translated Protein) 1.2 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 0.4 %Met (Mature Protein) 0.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSKESRKKSSNPASYGHASRSGLATAAKSVAKKTSKPATAKAVKKTAVKPAKAVTSKAST CCCCHHCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCHHHHHHHHCCC SKGTTSKGTTSKAAATKAKVSKPAAPAGTALAEGAKAPAFKLPRDGGGTVSLADYAGKKL CCCCCCCCCCHHHHHHHHHHCCCCCCCCHHHHCCCCCCCCCCCCCCCCEEEECCCCCCEE VLFFYPKANTPGCTKEAIDFTRLTKDFAAAGTAVLGVSADSVKAQDSFRDKHDLAVPLIS EEEEECCCCCCCCCHHHHHHHHHHHHHHHCCCEEEECCCCCCHHHHHCCCCCCCEEEEEC DETHEMLEAYGAWGEKSLYGRKFLGIIRSTVLIGTDGRVAKVWRNVKVDGHADAVLAAAR CHHHHHHHHHCCCCCCHHHHHHHHHHHHHHEEECCCCHHHHHHHHCCCCCCHHHHHHHHH DL CC >Mature Secondary Structure SKESRKKSSNPASYGHASRSGLATAAKSVAKKTSKPATAKAVKKTAVKPAKAVTSKAST CCCHHCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCHHHHHHHHCCC SKGTTSKGTTSKAAATKAKVSKPAAPAGTALAEGAKAPAFKLPRDGGGTVSLADYAGKKL CCCCCCCCCCHHHHHHHHHHCCCCCCCCHHHHCCCCCCCCCCCCCCCCEEEECCCCCCEE VLFFYPKANTPGCTKEAIDFTRLTKDFAAAGTAVLGVSADSVKAQDSFRDKHDLAVPLIS EEEEECCCCCCCCCHHHHHHHHHHHHHHHCCCEEEECCCCCCHHHHHCCCCCCCEEEEEC DETHEMLEAYGAWGEKSLYGRKFLGIIRSTVLIGTDGRVAKVWRNVKVDGHADAVLAAAR CHHHHHHHHHCCCCCCHHHHHHHHHHHHHHEEECCCCHHHHHHHHCCCCCCHHHHHHHHH DL CC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9634230; 12218036 [H]