| Definition | Bradyrhizobium sp. ORS278 chromosome, complete genome. |
|---|---|
| Accession | NC_009445 |
| Length | 7,456,587 |
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The map label for this gene is cyp109 [H]
Identifier: 146340428
GI number: 146340428
Start: 3646113
End: 3647273
Strand: Reverse
Name: cyp109 [H]
Synonym: BRADO3466
Alternate gene names: 146340428
Gene position: 3647273-3646113 (Counterclockwise)
Preceding gene: 146340429
Following gene: 146340427
Centisome position: 48.91
GC content: 71.75
Gene sequence:
>1161_bases ATGACCGCTCAGTCCTCGCAGCACGCATCCGCCGGCGCTCCCGTCGGCCACGACGGCACGCCCGTGATCCGCATCGACAG TTTCGCCGCGGCGCGCGCAGTGCTGCGCTCCGGCGATGTCCGGCAGGCCGGCTTCAATGCCGAGCTGGTGCACCGCTTCA TCGGTCCGCGCCACGCGCCGGTGCTGTACCAGGACGGCGAGCCGCATCAGAGGCAGCGCAGCGCCACCGCGCGGTTCTTC ACGCCGCGCGTGGTGGCGACGCGTTACTGTCGGCTGATGGAGACGACCAGCCGCGAGCTGGTGGCGCAGTTCGTCACGGC GCGCCGCGCCCGGCTCGACGATCTCAGCCTGACGCTGGCGGTGGCCGTGGCCGCCGACATCATCGGACTGACGGACAGCT CGCGCGCGGCGATGGCGGCGCGGCTGAACCGGTTCTTCGCCGCACCTGTCGGCCAGGGCGCCATCGCGACGCTGCGCAAT GCCGTGTTCGGACAGCTGCGCAGCCTCGCCTTCTATTGGTTCGACGTGCGCCCCGCCATCCGCGCGCGGCGCGCCCGGCC GCGCGAGGACGTCATCTCGCATCTCCTGGCCGAGGGTTATTCCGACCGCGAGATCCTCACCGAATGCCTCACCTATGGCG CCGCGGGCATGGCGACCACGCGCGAGTTCATCGTGATGGCGGGCGTGCGGCTGTTCGAGGACGACGCGCTGCGCGCGCGC TTCCTCGCCGGCAACGAACCGCAGCGCATGGCCATTCTCGAAGAGGTGCTGCGGCTCGAGCCGGTGGTGTCGACGCTGAA GCGCCGCACCGCGTGCGAGATGACGCTGGAGAGCGATGCGGGAGCAACGACGATCCCCGCGCGCAGCCTGCTCGAGATCG ACGTCGGCGCCGCCAATCGCGACGAAGCCGCGGCCGGCGCCTGCCCGCACCGCCTCGATCCGGACCGCACGCGTCCGGCC AAGGGCTCCGCCAGCCTGATGAGCTTCGGCGACGGCCCGCACCGCTGCCCCGGCGCGGCGGTCGCGCTGCACGAGGCCGC GATCTTCCTCGATCAGCTGCTGCGCGTCCCCGGCCTGCGCCTGGAGCGCCAGCCGACGAAGACGGTGAACCCGGTGAGCA GCGGCTATGAGTTGCGCGATGCTGTCATCGTGGTGGGGTGA
Upstream 100 bases:
>100_bases CGCGAGCAGAGATTGATCCGGTTCGCGCCGGCCTTAGCTCAAGGGGCCGGTCGCCGTCCTCTCTGGCGGATCCGGCGTTC CAACCGGCCCGTGAGTTAGC
Downstream 100 bases:
>100_bases GGCGAGACCGCCTCAGTCCTCACCCCCGCCGTCATTGCGCGCGCAGCGAAGCCATCCAGGGCCAAGCCAAGAACCCTGGA TTGCTTCGCTGCGCTCGCAA
Product: putative cytochrome P450
Products: NA
Alternate protein names: ORF405 [H]
Number of amino acids: Translated: 386; Mature: 385
Protein sequence:
>386_residues MTAQSSQHASAGAPVGHDGTPVIRIDSFAAARAVLRSGDVRQAGFNAELVHRFIGPRHAPVLYQDGEPHQRQRSATARFF TPRVVATRYCRLMETTSRELVAQFVTARRARLDDLSLTLAVAVAADIIGLTDSSRAAMAARLNRFFAAPVGQGAIATLRN AVFGQLRSLAFYWFDVRPAIRARRARPREDVISHLLAEGYSDREILTECLTYGAAGMATTREFIVMAGVRLFEDDALRAR FLAGNEPQRMAILEEVLRLEPVVSTLKRRTACEMTLESDAGATTIPARSLLEIDVGAANRDEAAAGACPHRLDPDRTRPA KGSASLMSFGDGPHRCPGAAVALHEAAIFLDQLLRVPGLRLERQPTKTVNPVSSGYELRDAVIVVG
Sequences:
>Translated_386_residues MTAQSSQHASAGAPVGHDGTPVIRIDSFAAARAVLRSGDVRQAGFNAELVHRFIGPRHAPVLYQDGEPHQRQRSATARFF TPRVVATRYCRLMETTSRELVAQFVTARRARLDDLSLTLAVAVAADIIGLTDSSRAAMAARLNRFFAAPVGQGAIATLRN AVFGQLRSLAFYWFDVRPAIRARRARPREDVISHLLAEGYSDREILTECLTYGAAGMATTREFIVMAGVRLFEDDALRAR FLAGNEPQRMAILEEVLRLEPVVSTLKRRTACEMTLESDAGATTIPARSLLEIDVGAANRDEAAAGACPHRLDPDRTRPA KGSASLMSFGDGPHRCPGAAVALHEAAIFLDQLLRVPGLRLERQPTKTVNPVSSGYELRDAVIVVG >Mature_385_residues TAQSSQHASAGAPVGHDGTPVIRIDSFAAARAVLRSGDVRQAGFNAELVHRFIGPRHAPVLYQDGEPHQRQRSATARFFT PRVVATRYCRLMETTSRELVAQFVTARRARLDDLSLTLAVAVAADIIGLTDSSRAAMAARLNRFFAAPVGQGAIATLRNA VFGQLRSLAFYWFDVRPAIRARRARPREDVISHLLAEGYSDREILTECLTYGAAGMATTREFIVMAGVRLFEDDALRARF LAGNEPQRMAILEEVLRLEPVVSTLKRRTACEMTLESDAGATTIPARSLLEIDVGAANRDEAAAGACPHRLDPDRTRPAK GSASLMSFGDGPHRCPGAAVALHEAAIFLDQLLRVPGLRLERQPTKTVNPVSSGYELRDAVIVVG
Specific function: Cytochromes P450 are a group of heme-thiolate monooxygenases. They oxidize a variety of structurally unrelated compounds, including steroids, fatty acids, and xenobiotics [H]
COG id: COG2124
COG function: function code Q; Cytochrome P450
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the cytochrome P450 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001128 - InterPro: IPR002397 - InterPro: IPR017972 [H]
Pfam domain/function: PF00067 p450 [H]
EC number: NA
Molecular weight: Translated: 41932; Mature: 41801
Theoretical pI: Translated: 9.55; Mature: 9.55
Prosite motif: PS00086 CYTOCHROME_P450
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTAQSSQHASAGAPVGHDGTPVIRIDSFAAARAVLRSGDVRQAGFNAELVHRFIGPRHAP CCCCCCCCCCCCCCCCCCCCCEEEECCHHHHHHHHHCCCCHHCCCCHHHHHHHHCCCCCC VLYQDGEPHQRQRSATARFFTPRVVATRYCRLMETTSRELVAQFVTARRARLDDLSLTLA EEECCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHH VAVAADIIGLTDSSRAAMAARLNRFFAAPVGQGAIATLRNAVFGQLRSLAFYWFDVRPAI HHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHEEECCHHH RARRARPREDVISHLLAEGYSDREILTECLTYGAAGMATTREFIVMAGVRLFEDDALRAR HHHCCCCHHHHHHHHHHCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCHHHHHH FLAGNEPQRMAILEEVLRLEPVVSTLKRRTACEMTLESDAGATTIPARSLLEIDVGAANR HHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCCCCCCCCHHEEEECCCCCC DEAAAGACPHRLDPDRTRPAKGSASLMSFGDGPHRCPGAAVALHEAAIFLDQLLRVPGLR CCHHCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCC LERQPTKTVNPVSSGYELRDAVIVVG CCCCCCCCCCCCCCCCEEECEEEEEC >Mature Secondary Structure TAQSSQHASAGAPVGHDGTPVIRIDSFAAARAVLRSGDVRQAGFNAELVHRFIGPRHAP CCCCCCCCCCCCCCCCCCCCEEEECCHHHHHHHHHCCCCHHCCCCHHHHHHHHCCCCCC VLYQDGEPHQRQRSATARFFTPRVVATRYCRLMETTSRELVAQFVTARRARLDDLSLTLA EEECCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHH VAVAADIIGLTDSSRAAMAARLNRFFAAPVGQGAIATLRNAVFGQLRSLAFYWFDVRPAI HHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHEEECCHHH RARRARPREDVISHLLAEGYSDREILTECLTYGAAGMATTREFIVMAGVRLFEDDALRAR HHHCCCCHHHHHHHHHHCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCHHHHHH FLAGNEPQRMAILEEVLRLEPVVSTLKRRTACEMTLESDAGATTIPARSLLEIDVGAANR HHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCCCCCCCCHHEEEECCCCCC DEAAAGACPHRLDPDRTRPAKGSASLMSFGDGPHRCPGAAVALHEAAIFLDQLLRVPGLR CCHHCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCC LERQPTKTVNPVSSGYELRDAVIVVG CCCCCCCCCCCCCCCCEEECEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 1849493 [H]