| Definition | Bradyrhizobium sp. ORS278 chromosome, complete genome. |
|---|---|
| Accession | NC_009445 |
| Length | 7,456,587 |
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The map label for this gene is 146340427
Identifier: 146340427
GI number: 146340427
Start: 3644457
End: 3645782
Strand: Reverse
Name: 146340427
Synonym: BRADO3465
Alternate gene names: NA
Gene position: 3645782-3644457 (Counterclockwise)
Preceding gene: 146340428
Following gene: 146340424
Centisome position: 48.89
GC content: 66.97
Gene sequence:
>1326_bases ATGCCGGGGTTGAGCCGTCGCGCGCATCTGCAGGGGCTGTTGGGGGTGGCCGCGATGGCCGGGATCGGCGGGGCGGCGCG CGCGGCCGACGCGCCGGCAGTGCCGCCGGAGGGGATCGGGCGCGGCATCAGGCACCTCTCCTACAGCGACATCGGCGGAC GGCCCGACAGCGTCCAGATCATGGCGCACCGCAACCACCTCTATGTCGGCCACATGTTCAGCGACGGCGTCACCATCCTC GACGCCAGCGATCCGCGCAATGTCAAGCCGGTGAATTTCTTCACCGCGGGGCAATACACCCGCACCCATCATCTGCAGAC CTCGGACGATCTGCTGCTGCTCGCCAACGGCGCCAACATCGTCGCGATGCAGTCCTATTCCGACCAGCGCGGCTATTTCG AAACCACGCTGTCCGACAGCATCACCAAGCGCAAGCCGTTCCGCAGCGGGCTCTCGATCCACGACATCTCCAAGCCCGGC GAGATGCGCGAGATCGCGTTTCTCGAAATGCCCGGGCTCGGCATCAACCGGCTGTCCTGGATGGGCGGCCGCTACGCCTA TGTCTCGGCGCATTTCGACGGCTTCACCGATCACTGCCTGTGCATCGTCGATCTCAACGAGATCACCAAGCCGGTCATCG TCTCCAAATGGTGGCTGCCGGGCATGAACCGCGCCGCCGGCGAGGTCTCGACCGCGCCCAAGGGCAAGCGCTACGCGCTG CATCACATGATCGTCGCCGGCTCGCTCGGCTACGGCGCATGGCGCGACGGCGGCTTCACCATTCACGACGTGTCCGATCC GGCCAAGCCGAAGCTGCTGTCGCATCTGAACTGGTCGCCGCCCTTCCCCGGCGGCACGCATACGCCGCTGCCGCTGCCCG GGCGCAACCTCGCCATCGTCGCCGACGAGGCCAATGCCGAAAAATGCGCCAAGGGCCTGTTCCAGATCTTCGTCGTCGAC GTCCGCGTGCCGGCCAATCCGGTGACGATCGCGACCTTGCCGGTGCCGAGCGACCGCGACTATTGCGCCGCGCCCGGCAC CTTCGGCCCGCACAATCTGCATGAGAACCGGCCCGGCTCGATGCAGAGCGAGGACACGATCTTCGCCACCTACAATGCCG GCGGCGTGCGCGTGTTCGACATCCGCAATCAGTTCGCGCCGAAGGAGATCGCCTCCTGGCTGCCGCCGGCGCCGGCCAGG CTGATCGACCCGCGGCCCAACGTGTCCCTCGCCGCCAAGACCGCCGACGTGTTCGTCACCAGGGATGGCCTGATGTACGC CACCGACTGGAACGCGGGCCTGCACGTGCTGCAATATGAGGTCTGA
Upstream 100 bases:
>100_bases GCCTGACGGCGCCGCTTTGCCCACCCTACGAATTTGGAGGCGCGGCAAACGCGGCGCGTGCTAGCCTCCTGGCAAAACAA GATCATGGGGGGAGGTCATC
Downstream 100 bases:
>100_bases GCGCGGCGAAGCCCTGTCGCAAACACGTGGTCGCTTCGTAGCCCGGATGAGCGCAGCGATATCCGGGGTCTCCACCGGCG CGAGTGATGGACCCGGATGT
Product: putative signal peptide
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 441; Mature: 440
Protein sequence:
>441_residues MPGLSRRAHLQGLLGVAAMAGIGGAARAADAPAVPPEGIGRGIRHLSYSDIGGRPDSVQIMAHRNHLYVGHMFSDGVTIL DASDPRNVKPVNFFTAGQYTRTHHLQTSDDLLLLANGANIVAMQSYSDQRGYFETTLSDSITKRKPFRSGLSIHDISKPG EMREIAFLEMPGLGINRLSWMGGRYAYVSAHFDGFTDHCLCIVDLNEITKPVIVSKWWLPGMNRAAGEVSTAPKGKRYAL HHMIVAGSLGYGAWRDGGFTIHDVSDPAKPKLLSHLNWSPPFPGGTHTPLPLPGRNLAIVADEANAEKCAKGLFQIFVVD VRVPANPVTIATLPVPSDRDYCAAPGTFGPHNLHENRPGSMQSEDTIFATYNAGGVRVFDIRNQFAPKEIASWLPPAPAR LIDPRPNVSLAAKTADVFVTRDGLMYATDWNAGLHVLQYEV
Sequences:
>Translated_441_residues MPGLSRRAHLQGLLGVAAMAGIGGAARAADAPAVPPEGIGRGIRHLSYSDIGGRPDSVQIMAHRNHLYVGHMFSDGVTIL DASDPRNVKPVNFFTAGQYTRTHHLQTSDDLLLLANGANIVAMQSYSDQRGYFETTLSDSITKRKPFRSGLSIHDISKPG EMREIAFLEMPGLGINRLSWMGGRYAYVSAHFDGFTDHCLCIVDLNEITKPVIVSKWWLPGMNRAAGEVSTAPKGKRYAL HHMIVAGSLGYGAWRDGGFTIHDVSDPAKPKLLSHLNWSPPFPGGTHTPLPLPGRNLAIVADEANAEKCAKGLFQIFVVD VRVPANPVTIATLPVPSDRDYCAAPGTFGPHNLHENRPGSMQSEDTIFATYNAGGVRVFDIRNQFAPKEIASWLPPAPAR LIDPRPNVSLAAKTADVFVTRDGLMYATDWNAGLHVLQYEV >Mature_440_residues PGLSRRAHLQGLLGVAAMAGIGGAARAADAPAVPPEGIGRGIRHLSYSDIGGRPDSVQIMAHRNHLYVGHMFSDGVTILD ASDPRNVKPVNFFTAGQYTRTHHLQTSDDLLLLANGANIVAMQSYSDQRGYFETTLSDSITKRKPFRSGLSIHDISKPGE MREIAFLEMPGLGINRLSWMGGRYAYVSAHFDGFTDHCLCIVDLNEITKPVIVSKWWLPGMNRAAGEVSTAPKGKRYALH HMIVAGSLGYGAWRDGGFTIHDVSDPAKPKLLSHLNWSPPFPGGTHTPLPLPGRNLAIVADEANAEKCAKGLFQIFVVDV RVPANPVTIATLPVPSDRDYCAAPGTFGPHNLHENRPGSMQSEDTIFATYNAGGVRVFDIRNQFAPKEIASWLPPAPARL IDPRPNVSLAAKTADVFVTRDGLMYATDWNAGLHVLQYEV
Specific function: Unknown
COG id: COG5276
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 47854; Mature: 47723
Theoretical pI: Translated: 8.07; Mature: 8.07
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPGLSRRAHLQGLLGVAAMAGIGGAARAADAPAVPPEGIGRGIRHLSYSDIGGRPDSVQI CCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCEEEE MAHRNHLYVGHMFSDGVTILDASDPRNVKPVNFFTAGQYTRTHHLQTSDDLLLLANGANI EEECCEEEEEEEECCCEEEEECCCCCCCCCEEEEECCCCEEEECCCCCCCEEEEECCCCE VAMQSYSDQRGYFETTLSDSITKRKPFRSGLSIHDISKPGEMREIAFLEMPGLGINRLSW EEECCCCCCCCEEEEHHHHHHHHCCHHHCCCCEEECCCCCCCEEEEEEECCCCCCCHHHH MGGRYAYVSAHFDGFTDHCLCIVDLNEITKPVIVSKWWLPGMNRAAGEVSTAPKGKRYAL CCCEEEEEEEECCCCCCCEEEEEEHHHCCCCEEEEEECCCCCCCCCCCCCCCCCCCEEEE HHMIVAGSLGYGAWRDGGFTIHDVSDPAKPKLLSHLNWSPPFPGGTHTPLPLPGRNLAIV EEEEEECCCCCCCCCCCCEEEEECCCCCCHHHHHHCCCCCCCCCCCCCCCCCCCCCEEEE ADEANAEKCAKGLFQIFVVDVRVPANPVTIATLPVPSDRDYCAAPGTFGPHNLHENRPGS ECCCCHHHHHHHEEEEEEEEEECCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCC MQSEDTIFATYNAGGVRVFDIRNQFAPKEIASWLPPAPARLIDPRPNVSLAAKTADVFVT CCCCCEEEEEECCCCEEEEECCCCCCHHHHHHHCCCCCHHEECCCCCCEEEEEEEEEEEE RDGLMYATDWNAGLHVLQYEV ECCEEEEEECCCCEEEEEEEC >Mature Secondary Structure PGLSRRAHLQGLLGVAAMAGIGGAARAADAPAVPPEGIGRGIRHLSYSDIGGRPDSVQI CCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCEEEE MAHRNHLYVGHMFSDGVTILDASDPRNVKPVNFFTAGQYTRTHHLQTSDDLLLLANGANI EEECCEEEEEEEECCCEEEEECCCCCCCCCEEEEECCCCEEEECCCCCCCEEEEECCCCE VAMQSYSDQRGYFETTLSDSITKRKPFRSGLSIHDISKPGEMREIAFLEMPGLGINRLSW EEECCCCCCCCEEEEHHHHHHHHCCHHHCCCCEEECCCCCCCEEEEEEECCCCCCCHHHH MGGRYAYVSAHFDGFTDHCLCIVDLNEITKPVIVSKWWLPGMNRAAGEVSTAPKGKRYAL CCCEEEEEEEECCCCCCCEEEEEEHHHCCCCEEEEEECCCCCCCCCCCCCCCCCCCEEEE HHMIVAGSLGYGAWRDGGFTIHDVSDPAKPKLLSHLNWSPPFPGGTHTPLPLPGRNLAIV EEEEEECCCCCCCCCCCCEEEEECCCCCCHHHHHHCCCCCCCCCCCCCCCCCCCCCEEEE ADEANAEKCAKGLFQIFVVDVRVPANPVTIATLPVPSDRDYCAAPGTFGPHNLHENRPGS ECCCCHHHHHHHEEEEEEEEEECCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCC MQSEDTIFATYNAGGVRVFDIRNQFAPKEIASWLPPAPARLIDPRPNVSLAAKTADVFVT CCCCCEEEEEECCCCEEEEECCCCCCHHHHHHHCCCCCHHEECCCCCCEEEEEEEEEEEE RDGLMYATDWNAGLHVLQYEV ECCEEEEEECCCCEEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA