| Definition | Bradyrhizobium sp. ORS278 chromosome, complete genome. |
|---|---|
| Accession | NC_009445 |
| Length | 7,456,587 |
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The map label for this gene is ssuD2 [H]
Identifier: 146340376
GI number: 146340376
Start: 3596781
End: 3597893
Strand: Direct
Name: ssuD2 [H]
Synonym: BRADO3405
Alternate gene names: 146340376
Gene position: 3596781-3597893 (Clockwise)
Preceding gene: 146340375
Following gene: 146340377
Centisome position: 48.24
GC content: 62.98
Gene sequence:
>1113_bases ATGACGACCAAGGATTCATCGATCAAGTTCGCCTATTGGGTGCCCAACGTGTCGGGTGGGCTGGTGATCTCCAATATCGA GCAGCGCACCAGCTGGGACATCGGCTATAACAAGAAGCTGGCGCAGATTGCGGAGGCAAGCGGCTTCGACTACGCGCTGA GCCAGATCCGCTTCACCGCCGGCTATGGCGCCGAATATCAGCATGAGTCCGTGTCGTTCAGTCATGCACTGCTCGAGGCG ACCACCACGCTGAAGGTCATCGCGGCCATCCTGCCTGGCCCCTGGCATCCGGCCGTCGTCGCCAAGCAGATTGCCACCAT CAATCATCTCACCGAGGGTCGCGTGGCCGTGAACATCGTCAGCGGCTGGTTCCGCGGCGAGTTCGCCGCGATCGGCGAGC CCTGGCTCGATCATGACGAGCGCTACCGCCGCTCGGAGGAGTTCATCCGTGCGCTCCGGGGCATCTGGACCGAGGACAAT TTCAATCTGCGCGGGGATTTCTACCGCTTCACGAACTACTCGCTGAAGCCGAAGCCGGTCGACCCGCAACCGGAAATCTT CCAGGGCGGCAGTTCGCGCGCGGCGCGCGACATGGCCTCGCGCGTGTCCGACTGGTACTTCACCAACGGCAACTCCGTCG AGGGCATCAAGGCCCAGGTCGACGACATCAGGGCCAAGGCGAAGGCCAACAATCATCAGGTCAAGATCGGCGTCAACGCG TTCGCGATCGCGCGCGACACCGAGGCCGAGGCGCAAGCCGTGCTCAAGGACATCATCGACCACGCCAATCCGGAAGCGGT GCATGCCTTCGCGCATGAGGTGGCAAATGCCGGCAAGGCCTCGCCGGAGCGCGAGGGCAATTGGGCCAAATCGACCTTCG AGGATCTGGTCCAGTACAATGACGGCTTCAAGACCAATCTGATCGGCACGCCCTTGCAGATCGCCGAGCGCATCGTCGCG CTCAAGGAGGTCGGGGTCGATCTCATTCTGCTCGGCTTCCTGCACTTCCAGGAGGAGGTCGCCTATTTCGGCAAGCACGT GATCCCGCTGGTGCGCGAGCTCGAAGCCAAGGCCGCGGCCAAGGCGGGCGTGCAAGTGCAGGCGGCGGAGTAG
Upstream 100 bases:
>100_bases CAACCAACACGTGCTGCCGGGCCGGCAGCGCAGTGGCCGGCGGCCGTCCTCATCGAGGCCAGACGGCATTCGTGACGATC AAGACAAGTGAGGAAAGCGC
Downstream 100 bases:
>100_bases GGCGAGCGCGATGATGTTGAGCGGGCTGACCACTCCGCTGGACGTGCTGGCGCTGGAGACCTGGGCTCCAGGGACGGCGC GTCAGGTGCTCGCGGCAGAG
Product: putative alkanesulfonate monooxygenase
Products: NA
Alternate protein names: FMNH2-dependent aliphatic sulfonate monooxygenase 2 [H]
Number of amino acids: Translated: 370; Mature: 369
Protein sequence:
>370_residues MTTKDSSIKFAYWVPNVSGGLVISNIEQRTSWDIGYNKKLAQIAEASGFDYALSQIRFTAGYGAEYQHESVSFSHALLEA TTTLKVIAAILPGPWHPAVVAKQIATINHLTEGRVAVNIVSGWFRGEFAAIGEPWLDHDERYRRSEEFIRALRGIWTEDN FNLRGDFYRFTNYSLKPKPVDPQPEIFQGGSSRAARDMASRVSDWYFTNGNSVEGIKAQVDDIRAKAKANNHQVKIGVNA FAIARDTEAEAQAVLKDIIDHANPEAVHAFAHEVANAGKASPEREGNWAKSTFEDLVQYNDGFKTNLIGTPLQIAERIVA LKEVGVDLILLGFLHFQEEVAYFGKHVIPLVRELEAKAAAKAGVQVQAAE
Sequences:
>Translated_370_residues MTTKDSSIKFAYWVPNVSGGLVISNIEQRTSWDIGYNKKLAQIAEASGFDYALSQIRFTAGYGAEYQHESVSFSHALLEA TTTLKVIAAILPGPWHPAVVAKQIATINHLTEGRVAVNIVSGWFRGEFAAIGEPWLDHDERYRRSEEFIRALRGIWTEDN FNLRGDFYRFTNYSLKPKPVDPQPEIFQGGSSRAARDMASRVSDWYFTNGNSVEGIKAQVDDIRAKAKANNHQVKIGVNA FAIARDTEAEAQAVLKDIIDHANPEAVHAFAHEVANAGKASPEREGNWAKSTFEDLVQYNDGFKTNLIGTPLQIAERIVA LKEVGVDLILLGFLHFQEEVAYFGKHVIPLVRELEAKAAAKAGVQVQAAE >Mature_369_residues TTKDSSIKFAYWVPNVSGGLVISNIEQRTSWDIGYNKKLAQIAEASGFDYALSQIRFTAGYGAEYQHESVSFSHALLEAT TTLKVIAAILPGPWHPAVVAKQIATINHLTEGRVAVNIVSGWFRGEFAAIGEPWLDHDERYRRSEEFIRALRGIWTEDNF NLRGDFYRFTNYSLKPKPVDPQPEIFQGGSSRAARDMASRVSDWYFTNGNSVEGIKAQVDDIRAKAKANNHQVKIGVNAF AIARDTEAEAQAVLKDIIDHANPEAVHAFAHEVANAGKASPEREGNWAKSTFEDLVQYNDGFKTNLIGTPLQIAERIVAL KEVGVDLILLGFLHFQEEVAYFGKHVIPLVRELEAKAAAKAGVQVQAAE
Specific function: Catalyzes the desulfonation of aliphatic sulfonates [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the SsuD family [H]
Homologues:
Organism=Escherichia coli, GI1787166, Length=357, Percent_Identity=26.6106442577031, Blast_Score=119, Evalue=3e-28, Organism=Escherichia coli, GI1787247, Length=358, Percent_Identity=25.4189944134078, Blast_Score=101, Evalue=1e-22,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR019911 - InterPro: IPR011251 - InterPro: IPR016048 [H]
Pfam domain/function: PF00296 Bac_luciferase [H]
EC number: =1.14.14.5 [H]
Molecular weight: Translated: 40972; Mature: 40841
Theoretical pI: Translated: 6.30; Mature: 6.30
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 0.5 %Met (Translated Protein) 0.5 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.3 %Met (Mature Protein) 0.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTTKDSSIKFAYWVPNVSGGLVISNIEQRTSWDIGYNKKLAQIAEASGFDYALSQIRFTA CCCCCCCEEEEEECCCCCCCEEEECCHHHHCCCCCCCHHHHHHHHCCCHHHHHHHEEEEC GYGAEYQHESVSFSHALLEATTTLKVIAAILPGPWHPAVVAKQIATINHLTEGRVAVNIV CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCEEEEEE SGWFRGEFAAIGEPWLDHDERYRRSEEFIRALRGIWTEDNFNLRGDFYRFTNYSLKPKPV HHHHCCCHHCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEECCCCCCCCCC DPQPEIFQGGSSRAARDMASRVSDWYFTNGNSVEGIKAQVDDIRAKAKANNHQVKIGVNA CCCHHHHCCCCCHHHHHHHHHHHCCEEECCCCCCHHHHHHHHHHHHHCCCCCEEEEECCE FAIARDTEAEAQAVLKDIIDHANPEAVHAFAHEVANAGKASPEREGNWAKSTFEDLVQYN EEEECCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHC DGFKTNLIGTPLQIAERIVALKEVGVDLILLGFLHFQEEVAYFGKHVIPLVRELEAKAAA CCCCCCCCCCHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH KAGVQVQAAE HCCCEEEECC >Mature Secondary Structure TTKDSSIKFAYWVPNVSGGLVISNIEQRTSWDIGYNKKLAQIAEASGFDYALSQIRFTA CCCCCCEEEEEECCCCCCCEEEECCHHHHCCCCCCCHHHHHHHHCCCHHHHHHHEEEEC GYGAEYQHESVSFSHALLEATTTLKVIAAILPGPWHPAVVAKQIATINHLTEGRVAVNIV CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCEEEEEE SGWFRGEFAAIGEPWLDHDERYRRSEEFIRALRGIWTEDNFNLRGDFYRFTNYSLKPKPV HHHHCCCHHCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEECCCCCCCCCC DPQPEIFQGGSSRAARDMASRVSDWYFTNGNSVEGIKAQVDDIRAKAKANNHQVKIGVNA CCCHHHHCCCCCHHHHHHHHHHHCCEEECCCCCCHHHHHHHHHHHHHCCCCCEEEEECCE FAIARDTEAEAQAVLKDIIDHANPEAVHAFAHEVANAGKASPEREGNWAKSTFEDLVQYN EEEECCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHC DGFKTNLIGTPLQIAERIVALKEVGVDLILLGFLHFQEEVAYFGKHVIPLVRELEAKAAA CCCCCCCCCCHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH KAGVQVQAAE HCCCEEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 11214968 [H]